Large-scale mitochondrial COI gene sequence variability reflects the complex colonization history of the invasive soft-shell clam, Mya arenaria (L.) (Bivalvia)

International audience The aim of the study was to determine genetic diversity in the soft-shell clam Mya arenaria on a widegeographical scale using mtDNA COI gene sequences. Low levels of genetic diversity was found, whichcan most likely be explained by a bottleneck effect during Pleistocene glacia...

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Published in:Estuarine, Coastal and Shelf Science
Main Authors: Lasota, Rafal, Pierscieniak, Karolina, Garcia, Pascale, Simon-Bouhet, Benoit, Wolowicz, Maciej
Other Authors: University of Gdansk, Institute of Oceanography-Department of Marie Ecosystem Functionning, LIttoral ENvironnement et Sociétés - UMRi 7266 (LIENSs), Université de La Rochelle (ULR)-Centre National de la Recherche Scientifique (CNRS), Centre d'Études Biologiques de Chizé - UMR 7372 (CEBC), Université de La Rochelle (ULR)-Centre National de la Recherche Scientifique (CNRS)-Institut National de Recherche pour l’Agriculture, l’Alimentation et l’Environnement (INRAE)
Format: Article in Journal/Newspaper
Language:English
Published: HAL CCSD 2016
Subjects:
Online Access:https://hal.archives-ouvertes.fr/hal-01548817
https://doi.org/10.1016/j.ecss.2016.08.033
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spelling ftccsdartic:oai:HAL:hal-01548817v1 2023-05-15T18:43:53+02:00 Large-scale mitochondrial COI gene sequence variability reflects the complex colonization history of the invasive soft-shell clam, Mya arenaria (L.) (Bivalvia) Lasota, Rafal Pierscieniak, Karolina Garcia, Pascale Simon-Bouhet, Benoit Wolowicz, Maciej University of Gdansk Institute of Oceanography-Department of Marie Ecosystem Functionning LIttoral ENvironnement et Sociétés - UMRi 7266 (LIENSs) Université de La Rochelle (ULR)-Centre National de la Recherche Scientifique (CNRS) Centre d'Études Biologiques de Chizé - UMR 7372 (CEBC) Université de La Rochelle (ULR)-Centre National de la Recherche Scientifique (CNRS)-Institut National de Recherche pour l’Agriculture, l’Alimentation et l’Environnement (INRAE) 2016 https://hal.archives-ouvertes.fr/hal-01548817 https://doi.org/10.1016/j.ecss.2016.08.033 en eng HAL CCSD Elsevier info:eu-repo/semantics/altIdentifier/doi/10.1016/j.ecss.2016.08.033 hal-01548817 https://hal.archives-ouvertes.fr/hal-01548817 doi:10.1016/j.ecss.2016.08.033 ISSN: 0272-7714 EISSN: 1096-0015 Estuarine, Coastal and Shelf Science https://hal.archives-ouvertes.fr/hal-01548817 Estuarine, Coastal and Shelf Science, Elsevier, 2016, 181, pp.256-265. ⟨10.1016/j.ecss.2016.08.033⟩ Spread Founder effect Bottleneck effect Introduction mtDNA Population genetics [SDE]Environmental Sciences info:eu-repo/semantics/article Journal articles 2016 ftccsdartic https://doi.org/10.1016/j.ecss.2016.08.033 2021-11-07T03:50:07Z International audience The aim of the study was to determine genetic diversity in the soft-shell clam Mya arenaria on a widegeographical scale using mtDNA COI gene sequences. Low levels of genetic diversity was found, whichcan most likely be explained by a bottleneck effect during Pleistocene glaciations and/or selection. Thegeographical genetic structuring of the studied populations was also very low. The star-like phylogeny ofthe haplotypes indicates a relatively recent, rapid population expansion following the glaciation periodand repeated expansion following the founder effect(s) after the initial introduction of the soft-shell clamto Europe. North American populations are characterized by the largest number of haplotypes, includingrare ones, as expected for native populations. Because of the founder effect connected with initial andrepeated expansion events, European populations have significantly lower numbers of haplotypes incomparison with those of North America. We also observed subtle differentiations among populationsfrom the North and Baltic seas. The recently founded soft-shell clam population in the Black Seaexhibited the highest genetic similarity to Baltic populations, which confirmed the hypothesis thatM. arenaria was introduced to the Gulf of Odessa from the Baltic Sea. The most enigmatic results wereobtained for populations from the White Sea, which were characterized by high genetic affinity withAmerican populations. Article in Journal/Newspaper White Sea Archive ouverte HAL (Hyper Article en Ligne, CCSD - Centre pour la Communication Scientifique Directe) White Sea Estuarine, Coastal and Shelf Science 181 256 265
institution Open Polar
collection Archive ouverte HAL (Hyper Article en Ligne, CCSD - Centre pour la Communication Scientifique Directe)
op_collection_id ftccsdartic
language English
topic Spread
Founder effect
Bottleneck effect
Introduction
mtDNA
Population genetics
[SDE]Environmental Sciences
spellingShingle Spread
Founder effect
Bottleneck effect
Introduction
mtDNA
Population genetics
[SDE]Environmental Sciences
Lasota, Rafal
Pierscieniak, Karolina
Garcia, Pascale
Simon-Bouhet, Benoit
Wolowicz, Maciej
Large-scale mitochondrial COI gene sequence variability reflects the complex colonization history of the invasive soft-shell clam, Mya arenaria (L.) (Bivalvia)
topic_facet Spread
Founder effect
Bottleneck effect
Introduction
mtDNA
Population genetics
[SDE]Environmental Sciences
description International audience The aim of the study was to determine genetic diversity in the soft-shell clam Mya arenaria on a widegeographical scale using mtDNA COI gene sequences. Low levels of genetic diversity was found, whichcan most likely be explained by a bottleneck effect during Pleistocene glaciations and/or selection. Thegeographical genetic structuring of the studied populations was also very low. The star-like phylogeny ofthe haplotypes indicates a relatively recent, rapid population expansion following the glaciation periodand repeated expansion following the founder effect(s) after the initial introduction of the soft-shell clamto Europe. North American populations are characterized by the largest number of haplotypes, includingrare ones, as expected for native populations. Because of the founder effect connected with initial andrepeated expansion events, European populations have significantly lower numbers of haplotypes incomparison with those of North America. We also observed subtle differentiations among populationsfrom the North and Baltic seas. The recently founded soft-shell clam population in the Black Seaexhibited the highest genetic similarity to Baltic populations, which confirmed the hypothesis thatM. arenaria was introduced to the Gulf of Odessa from the Baltic Sea. The most enigmatic results wereobtained for populations from the White Sea, which were characterized by high genetic affinity withAmerican populations.
author2 University of Gdansk
Institute of Oceanography-Department of Marie Ecosystem Functionning
LIttoral ENvironnement et Sociétés - UMRi 7266 (LIENSs)
Université de La Rochelle (ULR)-Centre National de la Recherche Scientifique (CNRS)
Centre d'Études Biologiques de Chizé - UMR 7372 (CEBC)
Université de La Rochelle (ULR)-Centre National de la Recherche Scientifique (CNRS)-Institut National de Recherche pour l’Agriculture, l’Alimentation et l’Environnement (INRAE)
format Article in Journal/Newspaper
author Lasota, Rafal
Pierscieniak, Karolina
Garcia, Pascale
Simon-Bouhet, Benoit
Wolowicz, Maciej
author_facet Lasota, Rafal
Pierscieniak, Karolina
Garcia, Pascale
Simon-Bouhet, Benoit
Wolowicz, Maciej
author_sort Lasota, Rafal
title Large-scale mitochondrial COI gene sequence variability reflects the complex colonization history of the invasive soft-shell clam, Mya arenaria (L.) (Bivalvia)
title_short Large-scale mitochondrial COI gene sequence variability reflects the complex colonization history of the invasive soft-shell clam, Mya arenaria (L.) (Bivalvia)
title_full Large-scale mitochondrial COI gene sequence variability reflects the complex colonization history of the invasive soft-shell clam, Mya arenaria (L.) (Bivalvia)
title_fullStr Large-scale mitochondrial COI gene sequence variability reflects the complex colonization history of the invasive soft-shell clam, Mya arenaria (L.) (Bivalvia)
title_full_unstemmed Large-scale mitochondrial COI gene sequence variability reflects the complex colonization history of the invasive soft-shell clam, Mya arenaria (L.) (Bivalvia)
title_sort large-scale mitochondrial coi gene sequence variability reflects the complex colonization history of the invasive soft-shell clam, mya arenaria (l.) (bivalvia)
publisher HAL CCSD
publishDate 2016
url https://hal.archives-ouvertes.fr/hal-01548817
https://doi.org/10.1016/j.ecss.2016.08.033
geographic White Sea
geographic_facet White Sea
genre White Sea
genre_facet White Sea
op_source ISSN: 0272-7714
EISSN: 1096-0015
Estuarine, Coastal and Shelf Science
https://hal.archives-ouvertes.fr/hal-01548817
Estuarine, Coastal and Shelf Science, Elsevier, 2016, 181, pp.256-265. ⟨10.1016/j.ecss.2016.08.033⟩
op_relation info:eu-repo/semantics/altIdentifier/doi/10.1016/j.ecss.2016.08.033
hal-01548817
https://hal.archives-ouvertes.fr/hal-01548817
doi:10.1016/j.ecss.2016.08.033
op_doi https://doi.org/10.1016/j.ecss.2016.08.033
container_title Estuarine, Coastal and Shelf Science
container_volume 181
container_start_page 256
op_container_end_page 265
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