DNA barcoding and molecular systematics of the benthic and demersal organisms of the CEAMARC survey.
15 pages International audience The Dumont d'Urville Sea (East Antarctic region) has been less investigated for DNA barcoding and molecular taxonomy than other parts of the Southern Ocean, such as the Ross Sea and the Antarctic Peninsula. The Collaborative East Antarctic MARine Census (CEAMARC)...
Published in: | Polar Science |
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Main Authors: | , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , |
Other Authors: | , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , |
Format: | Article in Journal/Newspaper |
Language: | English |
Published: |
HAL CCSD
2011
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Subjects: | |
Online Access: | https://hal.archives-ouvertes.fr/hal-00614982 https://hal.archives-ouvertes.fr/hal-00614982/document https://hal.archives-ouvertes.fr/hal-00614982/file/2011_Dettai_Polar%20Science_pr_DNA%20Barcoding%20and%20molecular%20systematics%20of%20the%20benthic%20and%20demersal%20organisms%20of%20the%20CEAMARC%20survey.pdf https://doi.org/10.1016/j.polar.2011.02.002 |
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ftccsdartic:oai:HAL:hal-00614982v1 |
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Open Polar |
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Archive ouverte HAL (Hyper Article en Ligne, CCSD - Centre pour la Communication Scientifique Directe) |
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ftccsdartic |
language |
English |
topic |
Cytochrome oxidase 1 CEAMARC Taxonomy Systematics Barcode [SDV.GEN.GPO]Life Sciences [q-bio]/Genetics/Populations and Evolution [q-bio.PE] [SDV.BID.SPT]Life Sciences [q-bio]/Biodiversity/Systematics Phylogenetics and taxonomy |
spellingShingle |
Cytochrome oxidase 1 CEAMARC Taxonomy Systematics Barcode [SDV.GEN.GPO]Life Sciences [q-bio]/Genetics/Populations and Evolution [q-bio.PE] [SDV.BID.SPT]Life Sciences [q-bio]/Biodiversity/Systematics Phylogenetics and taxonomy Dettaï, Agnès Adamowizc, Sarah J. Allcock, Louise Arango, Claudia P. Barnes, David K.A. Barratt, Iain Chenuil, Anne Couloux, Arnaud Cruaud, Corinne DAVID, Bruno Denis, Françoise Denys, Gaël Díaz, Angie Eléaume, Marc Féral, Jean-Pierre Froger, Aurélie Gallut, Cyril Grant, Rachel Griffiths, Huw J. Held, Christoph Hemery, Lenaïg G. Hosie, Graham Kuklinski, Piotr Lecointre, Guillaume Linse, Katrin Lozouet, Pierre Mah, Christopher Monniot, Françoise Norman, Mark D. O'Hara, Timothy Ozouf-Costaz, Catherine Piedallu, Claire Pierrat, Benjamin Poulin, Elie Puillandre, Nicolas Riddle, Martin Samadi, Sarah Saucède, Thomas Schubart, Christoph Smith, Peter J. Stevens, Darren W. Steinke, Dirk Strugnell, Jan M. Tarnowska, Katarzyna Wadley, Victoria Améziane, Nadia DNA barcoding and molecular systematics of the benthic and demersal organisms of the CEAMARC survey. |
topic_facet |
Cytochrome oxidase 1 CEAMARC Taxonomy Systematics Barcode [SDV.GEN.GPO]Life Sciences [q-bio]/Genetics/Populations and Evolution [q-bio.PE] [SDV.BID.SPT]Life Sciences [q-bio]/Biodiversity/Systematics Phylogenetics and taxonomy |
description |
15 pages International audience The Dumont d'Urville Sea (East Antarctic region) has been less investigated for DNA barcoding and molecular taxonomy than other parts of the Southern Ocean, such as the Ross Sea and the Antarctic Peninsula. The Collaborative East Antarctic MARine Census (CEAMARC) took place in this area during the austral summer of 2007e2008. The Australian vessel RSVAurora Australis collected very diverse samples of demersal and benthic organisms. The specimens were sorted centrally, and then distributed to taxonomic experts for molecular and morphological taxonomy and identification, especially barcoding. The COI sequences generated from CEAMARC material provide a sizeable proportion of the Census of Antarctic Marine Life barcodes although the studies are still ongoing, and represent the only source of sequences for a number of species. Barcoding appears to be a valuable method for identification within most groups, despite low divergences and haplotype sharing in a few species, and it is also useful as a preliminary taxonomic exploration method. Several new species are being described. CEAMARC samples have already provided new material for phylogeographic and phylogenetic studies in cephalopods, pycnogonids, teleost fish, crinoids and sea urchins, helping these studies to provide a better insight in the patterns of evolution in the Southern Ocean. |
author2 |
Systématique, adaptation, évolution (SAE) Université Pierre et Marie Curie - Paris 6 (UPMC)-Centre National de la Recherche Scientifique (CNRS) Canadian Centre for DNA Barcoding University of Guelph Martin Ryan Marine Science Institute National University of Ireland Galway (NUI Galway) School of Biological Sciences Queen's University Belfast (QUB) Natural Environments Program Queensland Museum British Antarctic Survey (BAS) Natural Environment Research Council (NERC) Diversité, évolution et écologie fonctionnelle marine (DIMAR) Centre National de la Recherche Scientifique (CNRS)-Université de la Méditerranée - Aix-Marseille 2 Genoscope - Centre national de séquençage Evry (GENOSCOPE) Université Paris-Saclay-Direction de Recherche Fondamentale (CEA) (DRF (CEA)) Commissariat à l'énergie atomique et aux énergies alternatives (CEA)-Commissariat à l'énergie atomique et aux énergies alternatives (CEA) Biogéosciences UMR 6282 Dijon (BGS) Université de Bourgogne (UB)-AgroSup Dijon - Institut National Supérieur des Sciences Agronomiques, de l'Alimentation et de l'Environnement-Centre National de la Recherche Scientifique (CNRS) Le Mans Université (UM) Biologie des Organismes et Ecosystèmes Aquatiques (BOREA) Centre National de la Recherche Scientifique (CNRS)-Université des Antilles (UA)-Muséum national d'Histoire naturelle (MNHN)-Institut de Recherche pour le Développement (IRD)-Sorbonne Université (SU)-Université de Caen Normandie (UNICAEN) Normandie Université (NU)-Normandie Université (NU) Instituto de Ecología y Biodiversidad Biologie des organismes marins et écosystèmes (BOME) Centre National de la Recherche Scientifique (CNRS)-Université Pierre et Marie Curie - Paris 6 (UPMC)-Muséum national d'Histoire naturelle (MNHN) Scott Polar Research Institute University of Cambridge UK (CAM) Functional Ecology Alfred-Wegener-Institut, Helmholtz-Zentrum für Polar- und Meeresforschung (AWI) Australian Antarctic Division (AAD) Australian Government, Department of the Environment and Energy The Natural History Museum London (NHM) Institute of Oceanology Polska Akademia Nauk = Polish Academy of Sciences (PAN) Department of Invertebrate Zoology Smithsonian Institution-National Museum of Natural History Museum Victoria Museum Victoria Melbourne Biologie 1 Universität Regensburg (UR) National Institute of Water and Atmospheric Research Wellington (NIWA) Department of Zoology |
format |
Article in Journal/Newspaper |
author |
Dettaï, Agnès Adamowizc, Sarah J. Allcock, Louise Arango, Claudia P. Barnes, David K.A. Barratt, Iain Chenuil, Anne Couloux, Arnaud Cruaud, Corinne DAVID, Bruno Denis, Françoise Denys, Gaël Díaz, Angie Eléaume, Marc Féral, Jean-Pierre Froger, Aurélie Gallut, Cyril Grant, Rachel Griffiths, Huw J. Held, Christoph Hemery, Lenaïg G. Hosie, Graham Kuklinski, Piotr Lecointre, Guillaume Linse, Katrin Lozouet, Pierre Mah, Christopher Monniot, Françoise Norman, Mark D. O'Hara, Timothy Ozouf-Costaz, Catherine Piedallu, Claire Pierrat, Benjamin Poulin, Elie Puillandre, Nicolas Riddle, Martin Samadi, Sarah Saucède, Thomas Schubart, Christoph Smith, Peter J. Stevens, Darren W. Steinke, Dirk Strugnell, Jan M. Tarnowska, Katarzyna Wadley, Victoria Améziane, Nadia |
author_facet |
Dettaï, Agnès Adamowizc, Sarah J. Allcock, Louise Arango, Claudia P. Barnes, David K.A. Barratt, Iain Chenuil, Anne Couloux, Arnaud Cruaud, Corinne DAVID, Bruno Denis, Françoise Denys, Gaël Díaz, Angie Eléaume, Marc Féral, Jean-Pierre Froger, Aurélie Gallut, Cyril Grant, Rachel Griffiths, Huw J. Held, Christoph Hemery, Lenaïg G. Hosie, Graham Kuklinski, Piotr Lecointre, Guillaume Linse, Katrin Lozouet, Pierre Mah, Christopher Monniot, Françoise Norman, Mark D. O'Hara, Timothy Ozouf-Costaz, Catherine Piedallu, Claire Pierrat, Benjamin Poulin, Elie Puillandre, Nicolas Riddle, Martin Samadi, Sarah Saucède, Thomas Schubart, Christoph Smith, Peter J. Stevens, Darren W. Steinke, Dirk Strugnell, Jan M. Tarnowska, Katarzyna Wadley, Victoria Améziane, Nadia |
author_sort |
Dettaï, Agnès |
title |
DNA barcoding and molecular systematics of the benthic and demersal organisms of the CEAMARC survey. |
title_short |
DNA barcoding and molecular systematics of the benthic and demersal organisms of the CEAMARC survey. |
title_full |
DNA barcoding and molecular systematics of the benthic and demersal organisms of the CEAMARC survey. |
title_fullStr |
DNA barcoding and molecular systematics of the benthic and demersal organisms of the CEAMARC survey. |
title_full_unstemmed |
DNA barcoding and molecular systematics of the benthic and demersal organisms of the CEAMARC survey. |
title_sort |
dna barcoding and molecular systematics of the benthic and demersal organisms of the ceamarc survey. |
publisher |
HAL CCSD |
publishDate |
2011 |
url |
https://hal.archives-ouvertes.fr/hal-00614982 https://hal.archives-ouvertes.fr/hal-00614982/document https://hal.archives-ouvertes.fr/hal-00614982/file/2011_Dettai_Polar%20Science_pr_DNA%20Barcoding%20and%20molecular%20systematics%20of%20the%20benthic%20and%20demersal%20organisms%20of%20the%20CEAMARC%20survey.pdf https://doi.org/10.1016/j.polar.2011.02.002 |
long_lat |
ENVELOPE(140.017,140.017,-66.667,-66.667) ENVELOPE(140.013,140.013,-66.667,-66.667) ENVELOPE(140.000,140.000,-65.000,-65.000) |
geographic |
Antarctic Southern Ocean The Antarctic Antarctic Peninsula Austral Ross Sea Dumont d'Urville Dumont-d'Urville D'Urville Sea |
geographic_facet |
Antarctic Southern Ocean The Antarctic Antarctic Peninsula Austral Ross Sea Dumont d'Urville Dumont-d'Urville D'Urville Sea |
genre |
Antarc* Antarctic Antarctic Peninsula D'Urville Sea Dumont D'Urville Sea Polar Science Polar Science Ross Sea Southern Ocean |
genre_facet |
Antarc* Antarctic Antarctic Peninsula D'Urville Sea Dumont D'Urville Sea Polar Science Polar Science Ross Sea Southern Ocean |
op_source |
ISSN: 1873-9652 Polar Science https://hal.archives-ouvertes.fr/hal-00614982 Polar Science, Elsevier, 2011, 38 (8), pp.298-312. ⟨10.1016/j.polar.2011.02.002⟩ |
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info:eu-repo/semantics/altIdentifier/doi/10.1016/j.polar.2011.02.002 hal-00614982 https://hal.archives-ouvertes.fr/hal-00614982 https://hal.archives-ouvertes.fr/hal-00614982/document https://hal.archives-ouvertes.fr/hal-00614982/file/2011_Dettai_Polar%20Science_pr_DNA%20Barcoding%20and%20molecular%20systematics%20of%20the%20benthic%20and%20demersal%20organisms%20of%20the%20CEAMARC%20survey.pdf doi:10.1016/j.polar.2011.02.002 |
op_rights |
info:eu-repo/semantics/OpenAccess |
op_doi |
https://doi.org/10.1016/j.polar.2011.02.002 |
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Polar Science |
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5 |
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container_start_page |
298 |
op_container_end_page |
312 |
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ftccsdartic:oai:HAL:hal-00614982v1 2023-05-15T13:58:31+02:00 DNA barcoding and molecular systematics of the benthic and demersal organisms of the CEAMARC survey. Dettaï, Agnès Adamowizc, Sarah J. Allcock, Louise Arango, Claudia P. Barnes, David K.A. Barratt, Iain Chenuil, Anne Couloux, Arnaud Cruaud, Corinne DAVID, Bruno Denis, Françoise Denys, Gaël Díaz, Angie Eléaume, Marc Féral, Jean-Pierre Froger, Aurélie Gallut, Cyril Grant, Rachel Griffiths, Huw J. Held, Christoph Hemery, Lenaïg G. Hosie, Graham Kuklinski, Piotr Lecointre, Guillaume Linse, Katrin Lozouet, Pierre Mah, Christopher Monniot, Françoise Norman, Mark D. O'Hara, Timothy Ozouf-Costaz, Catherine Piedallu, Claire Pierrat, Benjamin Poulin, Elie Puillandre, Nicolas Riddle, Martin Samadi, Sarah Saucède, Thomas Schubart, Christoph Smith, Peter J. Stevens, Darren W. Steinke, Dirk Strugnell, Jan M. Tarnowska, Katarzyna Wadley, Victoria Améziane, Nadia Systématique, adaptation, évolution (SAE) Université Pierre et Marie Curie - Paris 6 (UPMC)-Centre National de la Recherche Scientifique (CNRS) Canadian Centre for DNA Barcoding University of Guelph Martin Ryan Marine Science Institute National University of Ireland Galway (NUI Galway) School of Biological Sciences Queen's University Belfast (QUB) Natural Environments Program Queensland Museum British Antarctic Survey (BAS) Natural Environment Research Council (NERC) Diversité, évolution et écologie fonctionnelle marine (DIMAR) Centre National de la Recherche Scientifique (CNRS)-Université de la Méditerranée - Aix-Marseille 2 Genoscope - Centre national de séquençage Evry (GENOSCOPE) Université Paris-Saclay-Direction de Recherche Fondamentale (CEA) (DRF (CEA)) Commissariat à l'énergie atomique et aux énergies alternatives (CEA)-Commissariat à l'énergie atomique et aux énergies alternatives (CEA) Biogéosciences UMR 6282 Dijon (BGS) Université de Bourgogne (UB)-AgroSup Dijon - Institut National Supérieur des Sciences Agronomiques, de l'Alimentation et de l'Environnement-Centre National de la Recherche Scientifique (CNRS) Le Mans Université (UM) Biologie des Organismes et Ecosystèmes Aquatiques (BOREA) Centre National de la Recherche Scientifique (CNRS)-Université des Antilles (UA)-Muséum national d'Histoire naturelle (MNHN)-Institut de Recherche pour le Développement (IRD)-Sorbonne Université (SU)-Université de Caen Normandie (UNICAEN) Normandie Université (NU)-Normandie Université (NU) Instituto de Ecología y Biodiversidad Biologie des organismes marins et écosystèmes (BOME) Centre National de la Recherche Scientifique (CNRS)-Université Pierre et Marie Curie - Paris 6 (UPMC)-Muséum national d'Histoire naturelle (MNHN) Scott Polar Research Institute University of Cambridge UK (CAM) Functional Ecology Alfred-Wegener-Institut, Helmholtz-Zentrum für Polar- und Meeresforschung (AWI) Australian Antarctic Division (AAD) Australian Government, Department of the Environment and Energy The Natural History Museum London (NHM) Institute of Oceanology Polska Akademia Nauk = Polish Academy of Sciences (PAN) Department of Invertebrate Zoology Smithsonian Institution-National Museum of Natural History Museum Victoria Museum Victoria Melbourne Biologie 1 Universität Regensburg (UR) National Institute of Water and Atmospheric Research Wellington (NIWA) Department of Zoology 2011-08 https://hal.archives-ouvertes.fr/hal-00614982 https://hal.archives-ouvertes.fr/hal-00614982/document https://hal.archives-ouvertes.fr/hal-00614982/file/2011_Dettai_Polar%20Science_pr_DNA%20Barcoding%20and%20molecular%20systematics%20of%20the%20benthic%20and%20demersal%20organisms%20of%20the%20CEAMARC%20survey.pdf https://doi.org/10.1016/j.polar.2011.02.002 en eng HAL CCSD Elsevier info:eu-repo/semantics/altIdentifier/doi/10.1016/j.polar.2011.02.002 hal-00614982 https://hal.archives-ouvertes.fr/hal-00614982 https://hal.archives-ouvertes.fr/hal-00614982/document https://hal.archives-ouvertes.fr/hal-00614982/file/2011_Dettai_Polar%20Science_pr_DNA%20Barcoding%20and%20molecular%20systematics%20of%20the%20benthic%20and%20demersal%20organisms%20of%20the%20CEAMARC%20survey.pdf doi:10.1016/j.polar.2011.02.002 info:eu-repo/semantics/OpenAccess ISSN: 1873-9652 Polar Science https://hal.archives-ouvertes.fr/hal-00614982 Polar Science, Elsevier, 2011, 38 (8), pp.298-312. ⟨10.1016/j.polar.2011.02.002⟩ Cytochrome oxidase 1 CEAMARC Taxonomy Systematics Barcode [SDV.GEN.GPO]Life Sciences [q-bio]/Genetics/Populations and Evolution [q-bio.PE] [SDV.BID.SPT]Life Sciences [q-bio]/Biodiversity/Systematics Phylogenetics and taxonomy info:eu-repo/semantics/article Journal articles 2011 ftccsdartic https://doi.org/10.1016/j.polar.2011.02.002 2021-12-19T02:13:42Z 15 pages International audience The Dumont d'Urville Sea (East Antarctic region) has been less investigated for DNA barcoding and molecular taxonomy than other parts of the Southern Ocean, such as the Ross Sea and the Antarctic Peninsula. The Collaborative East Antarctic MARine Census (CEAMARC) took place in this area during the austral summer of 2007e2008. The Australian vessel RSVAurora Australis collected very diverse samples of demersal and benthic organisms. The specimens were sorted centrally, and then distributed to taxonomic experts for molecular and morphological taxonomy and identification, especially barcoding. The COI sequences generated from CEAMARC material provide a sizeable proportion of the Census of Antarctic Marine Life barcodes although the studies are still ongoing, and represent the only source of sequences for a number of species. Barcoding appears to be a valuable method for identification within most groups, despite low divergences and haplotype sharing in a few species, and it is also useful as a preliminary taxonomic exploration method. Several new species are being described. CEAMARC samples have already provided new material for phylogeographic and phylogenetic studies in cephalopods, pycnogonids, teleost fish, crinoids and sea urchins, helping these studies to provide a better insight in the patterns of evolution in the Southern Ocean. Article in Journal/Newspaper Antarc* Antarctic Antarctic Peninsula D'Urville Sea Dumont D'Urville Sea Polar Science Polar Science Ross Sea Southern Ocean Archive ouverte HAL (Hyper Article en Ligne, CCSD - Centre pour la Communication Scientifique Directe) Antarctic Southern Ocean The Antarctic Antarctic Peninsula Austral Ross Sea Dumont d'Urville ENVELOPE(140.017,140.017,-66.667,-66.667) Dumont-d'Urville ENVELOPE(140.013,140.013,-66.667,-66.667) D'Urville Sea ENVELOPE(140.000,140.000,-65.000,-65.000) Polar Science 5 2 298 312 |