Granulosicoccus coccoides sp. nov., isolated from leaves of seagrass (Zostera marina).
International audience A non-pigmented, motile, Gram-negative bacterium, strain Z 271(T), was isolated from the surface of leaves of the seagrass Zostera marina which was collected in Troitza Bay (Sea of Japan, Pacific Ocean). The new isolate grew between 5 degrees C and 28 degrees C and was slightl...
Published in: | International Journal of Systematic and Evolutionary Microbiology |
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Online Access: | https://hal.archives-ouvertes.fr/hal-00484169 https://doi.org/10.1099/ijs.0.013516-0 |
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ftccsdartic:oai:HAL:hal-00484169v1 2023-05-15T13:40:52+02:00 Granulosicoccus coccoides sp. nov., isolated from leaves of seagrass (Zostera marina). Kurilenko, Valerie V Christen, Richard Zhukova, Natalia V Kalinovskaya, Nataliya I Mikhailov, Valery V Crawford, Russell J Ivanova, Elena P Institut de signalisation, biologie du développement et cancer (ISBDC) Centre National de la Recherche Scientifique (CNRS)-Université Nice Sophia Antipolis (. - 2019) (UNS) COMUE Université Côte d'Azur (2015-2019) (COMUE UCA)-COMUE Université Côte d'Azur (2015-2019) (COMUE UCA)-Université Côte d'Azur (UCA) Pacific Institute of Bioorganic Chemistry Far Eastern Branch of the Russian Academy of Sciences (FEB RAS) Swinburne University of Technology Melbourne 2010-04 https://hal.archives-ouvertes.fr/hal-00484169 https://doi.org/10.1099/ijs.0.013516-0 en eng HAL CCSD Microbiology Society info:eu-repo/semantics/altIdentifier/doi/10.1099/ijs.0.013516-0 info:eu-repo/semantics/altIdentifier/pmid/19661498 hal-00484169 https://hal.archives-ouvertes.fr/hal-00484169 doi:10.1099/ijs.0.013516-0 PUBMED: 19661498 ISSN: 1466-5026 EISSN: 1466-5034 International Journal of Systematic and Evolutionary Microbiology https://hal.archives-ouvertes.fr/hal-00484169 International Journal of Systematic and Evolutionary Microbiology, Microbiology Society, 2010, 60 (Pt 4), pp.972-6. ⟨10.1099/ijs.0.013516-0⟩ [SDV.BDD]Life Sciences [q-bio]/Development Biology info:eu-repo/semantics/article Journal articles 2010 ftccsdartic https://doi.org/10.1099/ijs.0.013516-0 2021-12-12T06:00:40Z International audience A non-pigmented, motile, Gram-negative bacterium, strain Z 271(T), was isolated from the surface of leaves of the seagrass Zostera marina which was collected in Troitza Bay (Sea of Japan, Pacific Ocean). The new isolate grew between 5 degrees C and 28 degrees C and was slightly halophilic, tolerating environments containing up to 5 % (w/v) NaCl. Strain Z 271(T) was able to degrade Tweens 20, 40 and 80 and partially degrade gelatin, but was unable to degrade casein. Phosphatidylethanolamine (36.9 %) and phosphatidylglycerol (63.1 %) were the predominant phospholipids. The major fatty acids included C(18 : 1)omega7c (43.7 %), C(16 : 1)omega7c (31.1 %) and C(16 : 0) (16.8 %). The main respiratory quinone was Q-8. The DNA-DNA relatedness value of strain Z 271(T) with Granulosicoccus antarcticus IMCC3135(T) was 35 %. The G+C content of the DNA of strain Z 271(T) was 60.2 mol%. On the basis of phenotypic and genotypic characteristics and 16S rRNA gene sequence analysis, strain Z 271(T) represents a novel species of the genus Granulosicoccus for which the name Granulosicoccus coccoides sp. nov. is proposed. The type strain is Z 271(T) (=KMM 6014(T)=CIP 109923(T)). Article in Journal/Newspaper Antarc* antarcticus Archive ouverte HAL (Hyper Article en Ligne, CCSD - Centre pour la Communication Scientifique Directe) Pacific International Journal of Systematic and Evolutionary Microbiology 60 4 972 976 |
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Open Polar |
collection |
Archive ouverte HAL (Hyper Article en Ligne, CCSD - Centre pour la Communication Scientifique Directe) |
op_collection_id |
ftccsdartic |
language |
English |
topic |
[SDV.BDD]Life Sciences [q-bio]/Development Biology |
spellingShingle |
[SDV.BDD]Life Sciences [q-bio]/Development Biology Kurilenko, Valerie V Christen, Richard Zhukova, Natalia V Kalinovskaya, Nataliya I Mikhailov, Valery V Crawford, Russell J Ivanova, Elena P Granulosicoccus coccoides sp. nov., isolated from leaves of seagrass (Zostera marina). |
topic_facet |
[SDV.BDD]Life Sciences [q-bio]/Development Biology |
description |
International audience A non-pigmented, motile, Gram-negative bacterium, strain Z 271(T), was isolated from the surface of leaves of the seagrass Zostera marina which was collected in Troitza Bay (Sea of Japan, Pacific Ocean). The new isolate grew between 5 degrees C and 28 degrees C and was slightly halophilic, tolerating environments containing up to 5 % (w/v) NaCl. Strain Z 271(T) was able to degrade Tweens 20, 40 and 80 and partially degrade gelatin, but was unable to degrade casein. Phosphatidylethanolamine (36.9 %) and phosphatidylglycerol (63.1 %) were the predominant phospholipids. The major fatty acids included C(18 : 1)omega7c (43.7 %), C(16 : 1)omega7c (31.1 %) and C(16 : 0) (16.8 %). The main respiratory quinone was Q-8. The DNA-DNA relatedness value of strain Z 271(T) with Granulosicoccus antarcticus IMCC3135(T) was 35 %. The G+C content of the DNA of strain Z 271(T) was 60.2 mol%. On the basis of phenotypic and genotypic characteristics and 16S rRNA gene sequence analysis, strain Z 271(T) represents a novel species of the genus Granulosicoccus for which the name Granulosicoccus coccoides sp. nov. is proposed. The type strain is Z 271(T) (=KMM 6014(T)=CIP 109923(T)). |
author2 |
Institut de signalisation, biologie du développement et cancer (ISBDC) Centre National de la Recherche Scientifique (CNRS)-Université Nice Sophia Antipolis (. - 2019) (UNS) COMUE Université Côte d'Azur (2015-2019) (COMUE UCA)-COMUE Université Côte d'Azur (2015-2019) (COMUE UCA)-Université Côte d'Azur (UCA) Pacific Institute of Bioorganic Chemistry Far Eastern Branch of the Russian Academy of Sciences (FEB RAS) Swinburne University of Technology Melbourne |
format |
Article in Journal/Newspaper |
author |
Kurilenko, Valerie V Christen, Richard Zhukova, Natalia V Kalinovskaya, Nataliya I Mikhailov, Valery V Crawford, Russell J Ivanova, Elena P |
author_facet |
Kurilenko, Valerie V Christen, Richard Zhukova, Natalia V Kalinovskaya, Nataliya I Mikhailov, Valery V Crawford, Russell J Ivanova, Elena P |
author_sort |
Kurilenko, Valerie V |
title |
Granulosicoccus coccoides sp. nov., isolated from leaves of seagrass (Zostera marina). |
title_short |
Granulosicoccus coccoides sp. nov., isolated from leaves of seagrass (Zostera marina). |
title_full |
Granulosicoccus coccoides sp. nov., isolated from leaves of seagrass (Zostera marina). |
title_fullStr |
Granulosicoccus coccoides sp. nov., isolated from leaves of seagrass (Zostera marina). |
title_full_unstemmed |
Granulosicoccus coccoides sp. nov., isolated from leaves of seagrass (Zostera marina). |
title_sort |
granulosicoccus coccoides sp. nov., isolated from leaves of seagrass (zostera marina). |
publisher |
HAL CCSD |
publishDate |
2010 |
url |
https://hal.archives-ouvertes.fr/hal-00484169 https://doi.org/10.1099/ijs.0.013516-0 |
geographic |
Pacific |
geographic_facet |
Pacific |
genre |
Antarc* antarcticus |
genre_facet |
Antarc* antarcticus |
op_source |
ISSN: 1466-5026 EISSN: 1466-5034 International Journal of Systematic and Evolutionary Microbiology https://hal.archives-ouvertes.fr/hal-00484169 International Journal of Systematic and Evolutionary Microbiology, Microbiology Society, 2010, 60 (Pt 4), pp.972-6. ⟨10.1099/ijs.0.013516-0⟩ |
op_relation |
info:eu-repo/semantics/altIdentifier/doi/10.1099/ijs.0.013516-0 info:eu-repo/semantics/altIdentifier/pmid/19661498 hal-00484169 https://hal.archives-ouvertes.fr/hal-00484169 doi:10.1099/ijs.0.013516-0 PUBMED: 19661498 |
op_doi |
https://doi.org/10.1099/ijs.0.013516-0 |
container_title |
International Journal of Systematic and Evolutionary Microbiology |
container_volume |
60 |
container_issue |
4 |
container_start_page |
972 |
op_container_end_page |
976 |
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1766141732837130240 |