Investigations of reaction kinetics for immobilized enzymes - identification of parameters in the presence of diffusion limitation

A method is proposed for identification of kinetic parameters when diffusion of substrates is limiting in reactions catalyzed by immobilized enzymes. This method overcomes conventional sequential procedures, which assume immobilization does not affect the conformation of the enzyme and, thus, consid...

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Main Authors: Berendsen, Wouter R, Lapin, Alexei, Reuss, Matthias
Other Authors: Institute of Biochemical Engineering (IBVT), University of Stuttgart
Format: Article in Journal/Newspaper
Language:English
Published: HAL CCSD 2006
Subjects:
Online Access:https://hal.archives-ouvertes.fr/hal-00294425
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spelling ftccsdartic:oai:HAL:hal-00294425v1 2023-05-15T13:40:44+02:00 Investigations of reaction kinetics for immobilized enzymes - identification of parameters in the presence of diffusion limitation Berendsen, Wouter R Lapin, Alexei Reuss, Matthias Institute of Biochemical Engineering (IBVT) University of Stuttgart 2006 https://hal.archives-ouvertes.fr/hal-00294425 en eng HAL CCSD Wiley info:eu-repo/semantics/altIdentifier/pmid/17022668 hal-00294425 https://hal.archives-ouvertes.fr/hal-00294425 PUBMED: 17022668 ISSN: 8756-7938 Biotechnology Progress https://hal.archives-ouvertes.fr/hal-00294425 Biotechnology Progress, Wiley, 2006 [SDV.OT]Life Sciences [q-bio]/Other [q-bio.OT] info:eu-repo/semantics/article Journal articles 2006 ftccsdartic 2020-12-26T14:08:46Z A method is proposed for identification of kinetic parameters when diffusion of substrates is limiting in reactions catalyzed by immobilized enzymes. This method overcomes conventional sequential procedures, which assume immobilization does not affect the conformation of the enzyme and, thus, consider intrinsic and inherent kinetics to be the same. The coupled equations describing intraparticle mass transport are solved simultaneously using numerical methods and are used for direct estimation of kinetic parameters by fitting modeling results to time-course measurements in a stirred tank reactor. While most traditional procedures were based on Michaelis-Menten kinetics, the method presented here is applicable to more complex kinetic mechanisms involving multiple state variables, such as ping-pong bi-bi. The method is applied to the kinetic resolution of (R/S)-1-methoxy-2-propanol with vinyl acetate catalyzed by Candida antarctica lipase B. A mathematical model is developed consisting of irreversible ping-pong bi-bi kinetics, including competitive inhibition of both enantiomers. The kinetic model, which fits to experimental data over a wide range of both substrates (5-95%) and temperatures (5-56 degrees C), is used for simulations to study typical behavior of immobilized enzyme systems. Article in Journal/Newspaper Antarc* Antarctica Archive ouverte HAL (Hyper Article en Ligne, CCSD - Centre pour la Communication Scientifique Directe)
institution Open Polar
collection Archive ouverte HAL (Hyper Article en Ligne, CCSD - Centre pour la Communication Scientifique Directe)
op_collection_id ftccsdartic
language English
topic [SDV.OT]Life Sciences [q-bio]/Other [q-bio.OT]
spellingShingle [SDV.OT]Life Sciences [q-bio]/Other [q-bio.OT]
Berendsen, Wouter R
Lapin, Alexei
Reuss, Matthias
Investigations of reaction kinetics for immobilized enzymes - identification of parameters in the presence of diffusion limitation
topic_facet [SDV.OT]Life Sciences [q-bio]/Other [q-bio.OT]
description A method is proposed for identification of kinetic parameters when diffusion of substrates is limiting in reactions catalyzed by immobilized enzymes. This method overcomes conventional sequential procedures, which assume immobilization does not affect the conformation of the enzyme and, thus, consider intrinsic and inherent kinetics to be the same. The coupled equations describing intraparticle mass transport are solved simultaneously using numerical methods and are used for direct estimation of kinetic parameters by fitting modeling results to time-course measurements in a stirred tank reactor. While most traditional procedures were based on Michaelis-Menten kinetics, the method presented here is applicable to more complex kinetic mechanisms involving multiple state variables, such as ping-pong bi-bi. The method is applied to the kinetic resolution of (R/S)-1-methoxy-2-propanol with vinyl acetate catalyzed by Candida antarctica lipase B. A mathematical model is developed consisting of irreversible ping-pong bi-bi kinetics, including competitive inhibition of both enantiomers. The kinetic model, which fits to experimental data over a wide range of both substrates (5-95%) and temperatures (5-56 degrees C), is used for simulations to study typical behavior of immobilized enzyme systems.
author2 Institute of Biochemical Engineering (IBVT)
University of Stuttgart
format Article in Journal/Newspaper
author Berendsen, Wouter R
Lapin, Alexei
Reuss, Matthias
author_facet Berendsen, Wouter R
Lapin, Alexei
Reuss, Matthias
author_sort Berendsen, Wouter R
title Investigations of reaction kinetics for immobilized enzymes - identification of parameters in the presence of diffusion limitation
title_short Investigations of reaction kinetics for immobilized enzymes - identification of parameters in the presence of diffusion limitation
title_full Investigations of reaction kinetics for immobilized enzymes - identification of parameters in the presence of diffusion limitation
title_fullStr Investigations of reaction kinetics for immobilized enzymes - identification of parameters in the presence of diffusion limitation
title_full_unstemmed Investigations of reaction kinetics for immobilized enzymes - identification of parameters in the presence of diffusion limitation
title_sort investigations of reaction kinetics for immobilized enzymes - identification of parameters in the presence of diffusion limitation
publisher HAL CCSD
publishDate 2006
url https://hal.archives-ouvertes.fr/hal-00294425
genre Antarc*
Antarctica
genre_facet Antarc*
Antarctica
op_source ISSN: 8756-7938
Biotechnology Progress
https://hal.archives-ouvertes.fr/hal-00294425
Biotechnology Progress, Wiley, 2006
op_relation info:eu-repo/semantics/altIdentifier/pmid/17022668
hal-00294425
https://hal.archives-ouvertes.fr/hal-00294425
PUBMED: 17022668
_version_ 1766139246095106048