F-statistics under alternation of sexual and asexual reproduction: a model and data from schistosomes (platyhelminth parasites).

Accurate inferences on population genetics data require a sound underlying theoretical null model. Nearly nothing is known about the gene dynamics of organisms with complex life cycles precluding any biological interpretation of population genetics parameters. In this article, we used an infinite is...

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Published in:Molecular Ecology
Main Authors: Prugnolle, Franck, Roze, Denis, Théron, André, DE Meeûs, Thierry
Other Authors: Génétique et évolution des maladies infectieuses (GEMI), Centre National de la Recherche Scientifique (CNRS)-Université Montpellier 1 (UM1)-Institut de Recherche pour le Développement (IRD France-Sud ), Centre d'Etude sur le Polymorphisme des Micro-Organismes, UMR CNRS-IRD 9926 (CEPM), Centre National de la Recherche Scientifique (CNRS)-Institut de Recherche pour le Développement (IRD France-Sud ), Parasitologie fonctionnelle et évolutive 2003-2006 (PFE), Centre National de la Recherche Scientifique (CNRS)-Université de Perpignan Via Domitia (UPVD)
Format: Article in Journal/Newspaper
Language:English
Published: HAL CCSD 2005
Subjects:
Online Access:https://hal.archives-ouvertes.fr/hal-00104523
https://doi.org/10.1111/j.1365-294X.2005.02541.x
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spelling ftccsdartic:oai:HAL:hal-00104523v1 2023-05-15T18:05:43+02:00 F-statistics under alternation of sexual and asexual reproduction: a model and data from schistosomes (platyhelminth parasites). Prugnolle, Franck Roze, Denis Théron, André DE Meeûs, Thierry Génétique et évolution des maladies infectieuses (GEMI) Centre National de la Recherche Scientifique (CNRS)-Université Montpellier 1 (UM1)-Institut de Recherche pour le Développement (IRD France-Sud ) Centre d'Etude sur le Polymorphisme des Micro-Organismes, UMR CNRS-IRD 9926 (CEPM) Centre National de la Recherche Scientifique (CNRS)-Institut de Recherche pour le Développement (IRD France-Sud ) Parasitologie fonctionnelle et évolutive 2003-2006 (PFE) Centre National de la Recherche Scientifique (CNRS)-Université de Perpignan Via Domitia (UPVD) 2005-04 https://hal.archives-ouvertes.fr/hal-00104523 https://doi.org/10.1111/j.1365-294X.2005.02541.x en eng HAL CCSD info:eu-repo/semantics/altIdentifier/doi/10.1111/j.1365-294X.2005.02541.x info:eu-repo/semantics/altIdentifier/pmid/15813776 hal-00104523 https://hal.archives-ouvertes.fr/hal-00104523 doi:10.1111/j.1365-294X.2005.02541.x PUBMED: 15813776 Mol Ecol https://hal.archives-ouvertes.fr/hal-00104523 Mol Ecol, 2005, 14 (5), pp.1355-65. ⟨10.1111/j.1365-294X.2005.02541.x⟩ Asexual reproduction Complex life cycle F-statistics Heterozygote excesses Schistosomes MESH: Animals MESH: Comparative Study MESH: Rats MESH: Reproduction MESH: Research Support Non-U.S. Gov't MESH: Schistosoma MESH: Sex Factors MESH: Variation (Genetics) MESH: Female MESH: Genetics Population MESH: Guadeloupe MESH: Male MESH: Models Genetic MESH: Muridae MESH: Platyhelminths MESH: Population Dynamics [SDV.BID.EVO]Life Sciences [q-bio]/Biodiversity/Populations and Evolution [q-bio.PE] info:eu-repo/semantics/article Journal articles 2005 ftccsdartic https://doi.org/10.1111/j.1365-294X.2005.02541.x 2021-12-05T04:08:24Z Accurate inferences on population genetics data require a sound underlying theoretical null model. Nearly nothing is known about the gene dynamics of organisms with complex life cycles precluding any biological interpretation of population genetics parameters. In this article, we used an infinite island model to derive the expectations of those parameters for the life cycle of a dioecious organism obligatorily alternating sexual and asexual reproductions as it is the case for schistosomes (plathyhelminth parasites). This model allowed us to investigate the effects of the degree of mixing among individuals coming from different subpopulations at each new generation (represented in the model by the migration rates before and after clonal reproductions) and the variance in the reproductive success of individuals during the clonal phase. We also consider the effects of different migration rates and degrees of clonal reproductive skew between male and female individuals. Results show that the variance in the reproductive success of clones is very important in shaping the distribution of the genetic variability both within and among subpopulations. Thus, higher variance in the reproductive success of clones generates heterozygous excesses within subpopulations and also increases genetic differentiation between them. Migration occurring before and after asexual reproduction has different effects on the patterns of F(IS) and F(ST). When males and females display different degrees of reproductive skew or migration rates, we observe differences in their respective population genetic structure. While results of the model apply to any organism alternating sexual and clonal reproductions (e.g. all parasitic trematodes, many plants, and all aphididae), we finally confront some of these theoretical expectations to empirical data from Schistosoma mansoni infecting Rattus rattus in Guadeloupe. Article in Journal/Newspaper Rattus rattus Archive ouverte HAL (Hyper Article en Ligne, CCSD - Centre pour la Communication Scientifique Directe) Molecular Ecology 14 5 1355 1365
institution Open Polar
collection Archive ouverte HAL (Hyper Article en Ligne, CCSD - Centre pour la Communication Scientifique Directe)
op_collection_id ftccsdartic
language English
topic Asexual reproduction
Complex life cycle
F-statistics
Heterozygote excesses
Schistosomes
MESH: Animals
MESH: Comparative Study
MESH: Rats
MESH: Reproduction
MESH: Research Support
Non-U.S. Gov't
MESH: Schistosoma
MESH: Sex Factors
MESH: Variation (Genetics)
MESH: Female
MESH: Genetics
Population
MESH: Guadeloupe
MESH: Male
MESH: Models
Genetic
MESH: Muridae
MESH: Platyhelminths
MESH: Population Dynamics
[SDV.BID.EVO]Life Sciences [q-bio]/Biodiversity/Populations and Evolution [q-bio.PE]
spellingShingle Asexual reproduction
Complex life cycle
F-statistics
Heterozygote excesses
Schistosomes
MESH: Animals
MESH: Comparative Study
MESH: Rats
MESH: Reproduction
MESH: Research Support
Non-U.S. Gov't
MESH: Schistosoma
MESH: Sex Factors
MESH: Variation (Genetics)
MESH: Female
MESH: Genetics
Population
MESH: Guadeloupe
MESH: Male
MESH: Models
Genetic
MESH: Muridae
MESH: Platyhelminths
MESH: Population Dynamics
[SDV.BID.EVO]Life Sciences [q-bio]/Biodiversity/Populations and Evolution [q-bio.PE]
Prugnolle, Franck
Roze, Denis
Théron, André
DE Meeûs, Thierry
F-statistics under alternation of sexual and asexual reproduction: a model and data from schistosomes (platyhelminth parasites).
topic_facet Asexual reproduction
Complex life cycle
F-statistics
Heterozygote excesses
Schistosomes
MESH: Animals
MESH: Comparative Study
MESH: Rats
MESH: Reproduction
MESH: Research Support
Non-U.S. Gov't
MESH: Schistosoma
MESH: Sex Factors
MESH: Variation (Genetics)
MESH: Female
MESH: Genetics
Population
MESH: Guadeloupe
MESH: Male
MESH: Models
Genetic
MESH: Muridae
MESH: Platyhelminths
MESH: Population Dynamics
[SDV.BID.EVO]Life Sciences [q-bio]/Biodiversity/Populations and Evolution [q-bio.PE]
description Accurate inferences on population genetics data require a sound underlying theoretical null model. Nearly nothing is known about the gene dynamics of organisms with complex life cycles precluding any biological interpretation of population genetics parameters. In this article, we used an infinite island model to derive the expectations of those parameters for the life cycle of a dioecious organism obligatorily alternating sexual and asexual reproductions as it is the case for schistosomes (plathyhelminth parasites). This model allowed us to investigate the effects of the degree of mixing among individuals coming from different subpopulations at each new generation (represented in the model by the migration rates before and after clonal reproductions) and the variance in the reproductive success of individuals during the clonal phase. We also consider the effects of different migration rates and degrees of clonal reproductive skew between male and female individuals. Results show that the variance in the reproductive success of clones is very important in shaping the distribution of the genetic variability both within and among subpopulations. Thus, higher variance in the reproductive success of clones generates heterozygous excesses within subpopulations and also increases genetic differentiation between them. Migration occurring before and after asexual reproduction has different effects on the patterns of F(IS) and F(ST). When males and females display different degrees of reproductive skew or migration rates, we observe differences in their respective population genetic structure. While results of the model apply to any organism alternating sexual and clonal reproductions (e.g. all parasitic trematodes, many plants, and all aphididae), we finally confront some of these theoretical expectations to empirical data from Schistosoma mansoni infecting Rattus rattus in Guadeloupe.
author2 Génétique et évolution des maladies infectieuses (GEMI)
Centre National de la Recherche Scientifique (CNRS)-Université Montpellier 1 (UM1)-Institut de Recherche pour le Développement (IRD France-Sud )
Centre d'Etude sur le Polymorphisme des Micro-Organismes, UMR CNRS-IRD 9926 (CEPM)
Centre National de la Recherche Scientifique (CNRS)-Institut de Recherche pour le Développement (IRD France-Sud )
Parasitologie fonctionnelle et évolutive 2003-2006 (PFE)
Centre National de la Recherche Scientifique (CNRS)-Université de Perpignan Via Domitia (UPVD)
format Article in Journal/Newspaper
author Prugnolle, Franck
Roze, Denis
Théron, André
DE Meeûs, Thierry
author_facet Prugnolle, Franck
Roze, Denis
Théron, André
DE Meeûs, Thierry
author_sort Prugnolle, Franck
title F-statistics under alternation of sexual and asexual reproduction: a model and data from schistosomes (platyhelminth parasites).
title_short F-statistics under alternation of sexual and asexual reproduction: a model and data from schistosomes (platyhelminth parasites).
title_full F-statistics under alternation of sexual and asexual reproduction: a model and data from schistosomes (platyhelminth parasites).
title_fullStr F-statistics under alternation of sexual and asexual reproduction: a model and data from schistosomes (platyhelminth parasites).
title_full_unstemmed F-statistics under alternation of sexual and asexual reproduction: a model and data from schistosomes (platyhelminth parasites).
title_sort f-statistics under alternation of sexual and asexual reproduction: a model and data from schistosomes (platyhelminth parasites).
publisher HAL CCSD
publishDate 2005
url https://hal.archives-ouvertes.fr/hal-00104523
https://doi.org/10.1111/j.1365-294X.2005.02541.x
genre Rattus rattus
genre_facet Rattus rattus
op_source Mol Ecol
https://hal.archives-ouvertes.fr/hal-00104523
Mol Ecol, 2005, 14 (5), pp.1355-65. ⟨10.1111/j.1365-294X.2005.02541.x⟩
op_relation info:eu-repo/semantics/altIdentifier/doi/10.1111/j.1365-294X.2005.02541.x
info:eu-repo/semantics/altIdentifier/pmid/15813776
hal-00104523
https://hal.archives-ouvertes.fr/hal-00104523
doi:10.1111/j.1365-294X.2005.02541.x
PUBMED: 15813776
op_doi https://doi.org/10.1111/j.1365-294X.2005.02541.x
container_title Molecular Ecology
container_volume 14
container_issue 5
container_start_page 1355
op_container_end_page 1365
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