Identification of Saccharina groenlandica (Phaeophyceae) Around the Svalbard Archipelago: DNA Barcoding Using Cytochrome C Oxidase Subunit 1 (COI)

In the Arctic, brown algae (kelps) and seaweeds are ecologically important: providing habitat, protection, and nutrients for invertebrate and vertebrate species living in nearshore environments. Migrations of biota between the North Pacific and North Atlantic Oceans have occurred periodically during...

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Main Author: Lydon, Anniken
Format: Text
Language:unknown
Published: DigitalCommons@CalPoly 2015
Subjects:
Online Access:https://digitalcommons.calpoly.edu/theses/1368
https://doi.org/10.15368/theses.2015.22
https://digitalcommons.calpoly.edu/context/theses/article/2478/viewcontent/Thesis_ALydon_150320_F_edited150527.pdf
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spelling ftcalpoly:oai:digitalcommons.calpoly.edu:theses-2478 2023-11-12T04:11:17+01:00 Identification of Saccharina groenlandica (Phaeophyceae) Around the Svalbard Archipelago: DNA Barcoding Using Cytochrome C Oxidase Subunit 1 (COI) Lydon, Anniken 2015-03-01T08:00:00Z application/pdf https://digitalcommons.calpoly.edu/theses/1368 https://doi.org/10.15368/theses.2015.22 https://digitalcommons.calpoly.edu/context/theses/article/2478/viewcontent/Thesis_ALydon_150320_F_edited150527.pdf unknown DigitalCommons@CalPoly https://digitalcommons.calpoly.edu/theses/1368 doi:10.15368/theses.2015.22 https://digitalcommons.calpoly.edu/context/theses/article/2478/viewcontent/Thesis_ALydon_150320_F_edited150527.pdf Master's Theses Saccharina groenlandica Laminaria digitata kelp Arctic algae Biodiversity Biology Marine Biology Other Ecology and Evolutionary Biology text 2015 ftcalpoly https://doi.org/10.15368/theses.2015.22 2023-10-17T10:33:42Z In the Arctic, brown algae (kelps) and seaweeds are ecologically important: providing habitat, protection, and nutrients for invertebrate and vertebrate species living in nearshore environments. Migrations of biota between the North Pacific and North Atlantic Oceans have occurred periodically during Earth’s history leading to colonization of the Arctic Ocean. Around 3.5 Mya the “Great Trans-Arctic Biotic Interchange” occurred and the Laminariales order of kelp, thought to be of North Pacific origin, underwent a massive radiation and speciation event around the Arctic Ocean. Phylogenetic analysis performed on “Laminaria-like” specimens collected from six sampling locations around the Svalbard Archipelago identified both the presence of Saccharina groenlandica and Laminaria digitata. This research represents new records for the presence of S. groenlandica around the Svalbard Archipelago. S. groenlandica and L. digitata exhibit phenotypic similarities such that these two species can be difficult to tell apart in the field. In this study we have shown that the COI gene region can be used for DNA barcoding and can provide species level resolution between these two cryptic species. Prior to this study and Lund (2014), a number of biodiversity studies conducted around the Svalbard Archipelago identified the presence of L. digitata in a number of locations around the archipelago, however S. groenlandica was not identified in any of these prior studies. Phylogenetic analysis conducted here showed that all Svalbard specimens of S. groenlandica had identical COI sequences and up to 0.30% sequence diversity with S. groenlandica specimens from other parts of the Arctic Ocean. Further analysis is needed to understand the abundance of this newly recorded species around the archipelago and to investigate both the timing of arrival and mechanisms of colonization. Text Arctic Arctic Ocean North Atlantic Svalbard DigitalCommons@CalPoly (California Polytechnic State University, San Luis Obispo) Arctic Arctic Ocean Pacific Svalbard Svalbard Archipelago
institution Open Polar
collection DigitalCommons@CalPoly (California Polytechnic State University, San Luis Obispo)
op_collection_id ftcalpoly
language unknown
topic Saccharina groenlandica
Laminaria digitata
kelp
Arctic
algae
Biodiversity
Biology
Marine Biology
Other Ecology and Evolutionary Biology
spellingShingle Saccharina groenlandica
Laminaria digitata
kelp
Arctic
algae
Biodiversity
Biology
Marine Biology
Other Ecology and Evolutionary Biology
Lydon, Anniken
Identification of Saccharina groenlandica (Phaeophyceae) Around the Svalbard Archipelago: DNA Barcoding Using Cytochrome C Oxidase Subunit 1 (COI)
topic_facet Saccharina groenlandica
Laminaria digitata
kelp
Arctic
algae
Biodiversity
Biology
Marine Biology
Other Ecology and Evolutionary Biology
description In the Arctic, brown algae (kelps) and seaweeds are ecologically important: providing habitat, protection, and nutrients for invertebrate and vertebrate species living in nearshore environments. Migrations of biota between the North Pacific and North Atlantic Oceans have occurred periodically during Earth’s history leading to colonization of the Arctic Ocean. Around 3.5 Mya the “Great Trans-Arctic Biotic Interchange” occurred and the Laminariales order of kelp, thought to be of North Pacific origin, underwent a massive radiation and speciation event around the Arctic Ocean. Phylogenetic analysis performed on “Laminaria-like” specimens collected from six sampling locations around the Svalbard Archipelago identified both the presence of Saccharina groenlandica and Laminaria digitata. This research represents new records for the presence of S. groenlandica around the Svalbard Archipelago. S. groenlandica and L. digitata exhibit phenotypic similarities such that these two species can be difficult to tell apart in the field. In this study we have shown that the COI gene region can be used for DNA barcoding and can provide species level resolution between these two cryptic species. Prior to this study and Lund (2014), a number of biodiversity studies conducted around the Svalbard Archipelago identified the presence of L. digitata in a number of locations around the archipelago, however S. groenlandica was not identified in any of these prior studies. Phylogenetic analysis conducted here showed that all Svalbard specimens of S. groenlandica had identical COI sequences and up to 0.30% sequence diversity with S. groenlandica specimens from other parts of the Arctic Ocean. Further analysis is needed to understand the abundance of this newly recorded species around the archipelago and to investigate both the timing of arrival and mechanisms of colonization.
format Text
author Lydon, Anniken
author_facet Lydon, Anniken
author_sort Lydon, Anniken
title Identification of Saccharina groenlandica (Phaeophyceae) Around the Svalbard Archipelago: DNA Barcoding Using Cytochrome C Oxidase Subunit 1 (COI)
title_short Identification of Saccharina groenlandica (Phaeophyceae) Around the Svalbard Archipelago: DNA Barcoding Using Cytochrome C Oxidase Subunit 1 (COI)
title_full Identification of Saccharina groenlandica (Phaeophyceae) Around the Svalbard Archipelago: DNA Barcoding Using Cytochrome C Oxidase Subunit 1 (COI)
title_fullStr Identification of Saccharina groenlandica (Phaeophyceae) Around the Svalbard Archipelago: DNA Barcoding Using Cytochrome C Oxidase Subunit 1 (COI)
title_full_unstemmed Identification of Saccharina groenlandica (Phaeophyceae) Around the Svalbard Archipelago: DNA Barcoding Using Cytochrome C Oxidase Subunit 1 (COI)
title_sort identification of saccharina groenlandica (phaeophyceae) around the svalbard archipelago: dna barcoding using cytochrome c oxidase subunit 1 (coi)
publisher DigitalCommons@CalPoly
publishDate 2015
url https://digitalcommons.calpoly.edu/theses/1368
https://doi.org/10.15368/theses.2015.22
https://digitalcommons.calpoly.edu/context/theses/article/2478/viewcontent/Thesis_ALydon_150320_F_edited150527.pdf
geographic Arctic
Arctic Ocean
Pacific
Svalbard
Svalbard Archipelago
geographic_facet Arctic
Arctic Ocean
Pacific
Svalbard
Svalbard Archipelago
genre Arctic
Arctic Ocean
North Atlantic
Svalbard
genre_facet Arctic
Arctic Ocean
North Atlantic
Svalbard
op_source Master's Theses
op_relation https://digitalcommons.calpoly.edu/theses/1368
doi:10.15368/theses.2015.22
https://digitalcommons.calpoly.edu/context/theses/article/2478/viewcontent/Thesis_ALydon_150320_F_edited150527.pdf
op_doi https://doi.org/10.15368/theses.2015.22
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