Understanding microalgal composition and contributions in Antarctic glacial meltwater through rbcL sequencing

Microbial mats are found globally in dynamic aquatic environments. Visually different morphotypes (orange-red and black-green) also show different rates of nitrogen fixation and biogeochemical activity. Glacial meltwater communities in the McMurdo Dry Valleys (MDV) of Antarctica present unique oppor...

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Main Author: Kathryn Megan Barretto
Other Authors: Edward J. Carpenter, Jose de la Torre, Jonathon Stillman
Format: Master Thesis
Language:English
Published: San Francisco State University 2016
Subjects:
Online Access:http://hdl.handle.net/10211.3/181251
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spelling ftcalifstateuniv:oai:scholarworks:qn59q5551 2024-09-30T14:26:41+00:00 Understanding microalgal composition and contributions in Antarctic glacial meltwater through rbcL sequencing Kathryn Megan Barretto Edward J. Carpenter Jose de la Torre Jonathon Stillman 2016 http://hdl.handle.net/10211.3/181251 English eng San Francisco State University Science & Engineering Biology: Concentration in Integrative Biology http://hdl.handle.net/10211.3/181251 Copyright by Kathryn Megan Barretto, 2016 AS36 2016 BIOL .B37 Masters Thesis 2016 ftcalifstateuniv 2024-09-10T17:06:15Z Microbial mats are found globally in dynamic aquatic environments. Visually different morphotypes (orange-red and black-green) also show different rates of nitrogen fixation and biogeochemical activity. Glacial meltwater communities in the McMurdo Dry Valleys (MDV) of Antarctica present unique opportunities to study microbial mats, due to limited grazing effects and their sensitivity to climate change. Microscopy has yielded a poor understanding of species composition and diversity. I sought to address this limited understanding through deep sequencing of photosynthetic genes such as cbbL, and the 16S rRNA V4 hypervariable region. A total of 15 transects from five valleys were used, with samples representing stream-associated (submerged) or transiently wetted (hyporheic) transect points. While stream position is a clear driver of mat morphotype, morphotype was not associated with microbial community composition. Microbial mat communities exhibit temporal shifts in relative abundance, but not diversity of microorganisms present. We propose that unique mat morphotypes are not distinct communities, but rather a continuum of the same overall community ranging from submerged to hyporheic habitats. As such, microalgal mats have the potential for morphotypic and biogeochemical functional plasticity with changing hydrogeological conditions. Master Thesis Antarc* Antarctic Antarctica McMurdo Dry Valleys Scholarworks from California State University Antarctic McMurdo Dry Valleys
institution Open Polar
collection Scholarworks from California State University
op_collection_id ftcalifstateuniv
language English
description Microbial mats are found globally in dynamic aquatic environments. Visually different morphotypes (orange-red and black-green) also show different rates of nitrogen fixation and biogeochemical activity. Glacial meltwater communities in the McMurdo Dry Valleys (MDV) of Antarctica present unique opportunities to study microbial mats, due to limited grazing effects and their sensitivity to climate change. Microscopy has yielded a poor understanding of species composition and diversity. I sought to address this limited understanding through deep sequencing of photosynthetic genes such as cbbL, and the 16S rRNA V4 hypervariable region. A total of 15 transects from five valleys were used, with samples representing stream-associated (submerged) or transiently wetted (hyporheic) transect points. While stream position is a clear driver of mat morphotype, morphotype was not associated with microbial community composition. Microbial mat communities exhibit temporal shifts in relative abundance, but not diversity of microorganisms present. We propose that unique mat morphotypes are not distinct communities, but rather a continuum of the same overall community ranging from submerged to hyporheic habitats. As such, microalgal mats have the potential for morphotypic and biogeochemical functional plasticity with changing hydrogeological conditions.
author2 Edward J. Carpenter
Jose de la Torre
Jonathon Stillman
format Master Thesis
author Kathryn Megan Barretto
spellingShingle Kathryn Megan Barretto
Understanding microalgal composition and contributions in Antarctic glacial meltwater through rbcL sequencing
author_facet Kathryn Megan Barretto
author_sort Kathryn Megan Barretto
title Understanding microalgal composition and contributions in Antarctic glacial meltwater through rbcL sequencing
title_short Understanding microalgal composition and contributions in Antarctic glacial meltwater through rbcL sequencing
title_full Understanding microalgal composition and contributions in Antarctic glacial meltwater through rbcL sequencing
title_fullStr Understanding microalgal composition and contributions in Antarctic glacial meltwater through rbcL sequencing
title_full_unstemmed Understanding microalgal composition and contributions in Antarctic glacial meltwater through rbcL sequencing
title_sort understanding microalgal composition and contributions in antarctic glacial meltwater through rbcl sequencing
publisher San Francisco State University
publishDate 2016
url http://hdl.handle.net/10211.3/181251
geographic Antarctic
McMurdo Dry Valleys
geographic_facet Antarctic
McMurdo Dry Valleys
genre Antarc*
Antarctic
Antarctica
McMurdo Dry Valleys
genre_facet Antarc*
Antarctic
Antarctica
McMurdo Dry Valleys
op_source AS36 2016 BIOL .B37
op_relation http://hdl.handle.net/10211.3/181251
op_rights Copyright by Kathryn Megan Barretto, 2016
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