Understanding microalgal composition and contributions in Antarctic glacial meltwater through rbcL sequencing

Microbial mats are found globally in dynamic aquatic environments. Visually different morphotypes (orange-red and black-green) also show different rates of nitrogen fixation and biogeochemical activity. Glacial meltwater communities in the McMurdo Dry Valleys (MDV) of Antarctica present unique oppor...

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Bibliographic Details
Main Author: Barretto, Kathryn Megan
Other Authors: Biology
Format: Thesis
Language:English
Published: San Francisco State University 2016
Subjects:
Online Access:http://hdl.handle.net/10211.3/181251
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spelling ftcalifstateuniv:oai:dspace.calstate.edu:10211.3/181251 2023-05-15T13:52:30+02:00 Understanding microalgal composition and contributions in Antarctic glacial meltwater through rbcL sequencing Barretto, Kathryn Megan Biology 2016 http://hdl.handle.net/10211.3/181251 en_US eng San Francisco State University http://hdl.handle.net/10211.3/181251 Copyright by Kathryn Megan Barretto, 2016 AS36 2016 BIOL .B37 Thesis 2016 ftcalifstateuniv 2022-04-13T11:32:02Z Microbial mats are found globally in dynamic aquatic environments. Visually different morphotypes (orange-red and black-green) also show different rates of nitrogen fixation and biogeochemical activity. Glacial meltwater communities in the McMurdo Dry Valleys (MDV) of Antarctica present unique opportunities to study microbial mats, due to limited grazing effects and their sensitivity to climate change. Microscopy has yielded a poor understanding of species composition and diversity. I sought to address this limited understanding through deep sequencing of photosynthetic genes such as cbbL, and the 16S rRNA V4 hypervariable region. A total of 15 transects from five valleys were used, with samples representing stream-associated (submerged) or transiently wetted (hyporheic) transect points. While stream position is a clear driver of mat morphotype, morphotype was not associated with microbial community composition. Microbial mat communities exhibit temporal shifts in relative abundance, but not diversity of microorganisms present. We propose that unique mat morphotypes are not distinct communities, but rather a continuum of the same overall community ranging from submerged to hyporheic habitats. As such, microalgal mats have the potential for morphotypic and biogeochemical functional plasticity with changing hydrogeological conditions. Thesis Antarc* Antarctic Antarctica McMurdo Dry Valleys California State University (CSU): DSpace Antarctic McMurdo Dry Valleys
institution Open Polar
collection California State University (CSU): DSpace
op_collection_id ftcalifstateuniv
language English
description Microbial mats are found globally in dynamic aquatic environments. Visually different morphotypes (orange-red and black-green) also show different rates of nitrogen fixation and biogeochemical activity. Glacial meltwater communities in the McMurdo Dry Valleys (MDV) of Antarctica present unique opportunities to study microbial mats, due to limited grazing effects and their sensitivity to climate change. Microscopy has yielded a poor understanding of species composition and diversity. I sought to address this limited understanding through deep sequencing of photosynthetic genes such as cbbL, and the 16S rRNA V4 hypervariable region. A total of 15 transects from five valleys were used, with samples representing stream-associated (submerged) or transiently wetted (hyporheic) transect points. While stream position is a clear driver of mat morphotype, morphotype was not associated with microbial community composition. Microbial mat communities exhibit temporal shifts in relative abundance, but not diversity of microorganisms present. We propose that unique mat morphotypes are not distinct communities, but rather a continuum of the same overall community ranging from submerged to hyporheic habitats. As such, microalgal mats have the potential for morphotypic and biogeochemical functional plasticity with changing hydrogeological conditions.
author2 Biology
format Thesis
author Barretto, Kathryn Megan
spellingShingle Barretto, Kathryn Megan
Understanding microalgal composition and contributions in Antarctic glacial meltwater through rbcL sequencing
author_facet Barretto, Kathryn Megan
author_sort Barretto, Kathryn Megan
title Understanding microalgal composition and contributions in Antarctic glacial meltwater through rbcL sequencing
title_short Understanding microalgal composition and contributions in Antarctic glacial meltwater through rbcL sequencing
title_full Understanding microalgal composition and contributions in Antarctic glacial meltwater through rbcL sequencing
title_fullStr Understanding microalgal composition and contributions in Antarctic glacial meltwater through rbcL sequencing
title_full_unstemmed Understanding microalgal composition and contributions in Antarctic glacial meltwater through rbcL sequencing
title_sort understanding microalgal composition and contributions in antarctic glacial meltwater through rbcl sequencing
publisher San Francisco State University
publishDate 2016
url http://hdl.handle.net/10211.3/181251
geographic Antarctic
McMurdo Dry Valleys
geographic_facet Antarctic
McMurdo Dry Valleys
genre Antarc*
Antarctic
Antarctica
McMurdo Dry Valleys
genre_facet Antarc*
Antarctic
Antarctica
McMurdo Dry Valleys
op_source AS36 2016 BIOL .B37
op_relation http://hdl.handle.net/10211.3/181251
op_rights Copyright by Kathryn Megan Barretto, 2016
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