Subglacial Lake Vostok (Antarctica) Accretion Ice Contains a Diverse Set of Sequences from Aquatic, Marine and Sediment-Inhabiting Bacteria and Eukarya

Lake Vostok, the 7th largest (by volume) and 4th deepest lake on Earth, is covered by more than 3,700 m of ice, making it the largest subglacial lake known. The combination of cold, heat (from possible hydrothermal activity), pressure (from the overriding glacier), limited nutrients and complete dar...

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Published in:PLoS ONE
Main Authors: Rogers, Scott O., Shtarkman, Yury M., Koçer, Zeynep A, Edgar, Robyn, Veerapneni, Ram S., D'Elia, Tom, Morris, Paul F.
Format: Text
Language:unknown
Published: ScholarWorks@BGSU 2013
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Online Access:https://scholarworks.bgsu.edu/bio_sci_pub/10
https://doi.org/10.1371/journal.pone.0067221
https://scholarworks.bgsu.edu/context/bio_sci_pub/article/1014/viewcontent/rogers_subglacial.pdf
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spelling ftbgstateuniv:oai:scholarworks.bgsu.edu:bio_sci_pub-1014 2023-11-05T03:36:54+01:00 Subglacial Lake Vostok (Antarctica) Accretion Ice Contains a Diverse Set of Sequences from Aquatic, Marine and Sediment-Inhabiting Bacteria and Eukarya Rogers, Scott O. Shtarkman, Yury M. Koçer, Zeynep A Edgar, Robyn Veerapneni, Ram S. D'Elia, Tom Morris, Paul F. 2013-07-01T07:00:00Z application/pdf https://scholarworks.bgsu.edu/bio_sci_pub/10 https://doi.org/10.1371/journal.pone.0067221 https://scholarworks.bgsu.edu/context/bio_sci_pub/article/1014/viewcontent/rogers_subglacial.pdf unknown ScholarWorks@BGSU https://scholarworks.bgsu.edu/bio_sci_pub/10 doi:10.1371/journal.pone.0067221 https://scholarworks.bgsu.edu/context/bio_sci_pub/article/1014/viewcontent/rogers_subglacial.pdf http://creativecommons.org/licenses/by/3.0/ Biological Sciences Faculty Publications Biology text 2013 ftbgstateuniv https://doi.org/10.1371/journal.pone.0067221 2023-10-10T11:27:48Z Lake Vostok, the 7th largest (by volume) and 4th deepest lake on Earth, is covered by more than 3,700 m of ice, making it the largest subglacial lake known. The combination of cold, heat (from possible hydrothermal activity), pressure (from the overriding glacier), limited nutrients and complete darkness presents extreme challenges to life. Here, we report metagenomic/metatranscriptomic sequence analyses from four accretion ice sections from the Vostok 5G ice core. Two sections accreted in the vicinity of an embayment on the southwestern end of the lake, and the other two represented part of the southern main basin. We obtained 3,507 unique gene sequences from concentrates of 500 ml of 0.22 μm-filtered accretion ice meltwater. Taxonomic classifications (to genus and/or species) were possible for 1,623 of the sequences. Species determinations in combination with mRNA gene sequence results allowed deduction of the metabolic pathways represented in the accretion ice and, by extension, in the lake. Approximately 94% of the sequences were from Bacteria and 6% were from Eukarya. Only two sequences were from Archaea. In general, the taxa were similar to organisms previously described from lakes, brackish water, marine environments, soil, glaciers, ice, lake sediments, deep-sea sediments, deep-sea thermal vents, animals and plants. Sequences from aerobic, anaerobic, psychrophilic, thermophilic, halophilic, alkaliphilic, acidophilic, desiccation-resistant, autotrophic and heterotrophic organisms were present, including a number from multicellular eukaryotes. © 2013 Shtarkman et al. Text Antarc* Antarctica ice core Bowling Green State University: ScholarWorks@BGSU PLoS ONE 8 7 e67221
institution Open Polar
collection Bowling Green State University: ScholarWorks@BGSU
op_collection_id ftbgstateuniv
language unknown
topic Biology
spellingShingle Biology
Rogers, Scott O.
Shtarkman, Yury M.
Koçer, Zeynep A
Edgar, Robyn
Veerapneni, Ram S.
D'Elia, Tom
Morris, Paul F.
Subglacial Lake Vostok (Antarctica) Accretion Ice Contains a Diverse Set of Sequences from Aquatic, Marine and Sediment-Inhabiting Bacteria and Eukarya
topic_facet Biology
description Lake Vostok, the 7th largest (by volume) and 4th deepest lake on Earth, is covered by more than 3,700 m of ice, making it the largest subglacial lake known. The combination of cold, heat (from possible hydrothermal activity), pressure (from the overriding glacier), limited nutrients and complete darkness presents extreme challenges to life. Here, we report metagenomic/metatranscriptomic sequence analyses from four accretion ice sections from the Vostok 5G ice core. Two sections accreted in the vicinity of an embayment on the southwestern end of the lake, and the other two represented part of the southern main basin. We obtained 3,507 unique gene sequences from concentrates of 500 ml of 0.22 μm-filtered accretion ice meltwater. Taxonomic classifications (to genus and/or species) were possible for 1,623 of the sequences. Species determinations in combination with mRNA gene sequence results allowed deduction of the metabolic pathways represented in the accretion ice and, by extension, in the lake. Approximately 94% of the sequences were from Bacteria and 6% were from Eukarya. Only two sequences were from Archaea. In general, the taxa were similar to organisms previously described from lakes, brackish water, marine environments, soil, glaciers, ice, lake sediments, deep-sea sediments, deep-sea thermal vents, animals and plants. Sequences from aerobic, anaerobic, psychrophilic, thermophilic, halophilic, alkaliphilic, acidophilic, desiccation-resistant, autotrophic and heterotrophic organisms were present, including a number from multicellular eukaryotes. © 2013 Shtarkman et al.
format Text
author Rogers, Scott O.
Shtarkman, Yury M.
Koçer, Zeynep A
Edgar, Robyn
Veerapneni, Ram S.
D'Elia, Tom
Morris, Paul F.
author_facet Rogers, Scott O.
Shtarkman, Yury M.
Koçer, Zeynep A
Edgar, Robyn
Veerapneni, Ram S.
D'Elia, Tom
Morris, Paul F.
author_sort Rogers, Scott O.
title Subglacial Lake Vostok (Antarctica) Accretion Ice Contains a Diverse Set of Sequences from Aquatic, Marine and Sediment-Inhabiting Bacteria and Eukarya
title_short Subglacial Lake Vostok (Antarctica) Accretion Ice Contains a Diverse Set of Sequences from Aquatic, Marine and Sediment-Inhabiting Bacteria and Eukarya
title_full Subglacial Lake Vostok (Antarctica) Accretion Ice Contains a Diverse Set of Sequences from Aquatic, Marine and Sediment-Inhabiting Bacteria and Eukarya
title_fullStr Subglacial Lake Vostok (Antarctica) Accretion Ice Contains a Diverse Set of Sequences from Aquatic, Marine and Sediment-Inhabiting Bacteria and Eukarya
title_full_unstemmed Subglacial Lake Vostok (Antarctica) Accretion Ice Contains a Diverse Set of Sequences from Aquatic, Marine and Sediment-Inhabiting Bacteria and Eukarya
title_sort subglacial lake vostok (antarctica) accretion ice contains a diverse set of sequences from aquatic, marine and sediment-inhabiting bacteria and eukarya
publisher ScholarWorks@BGSU
publishDate 2013
url https://scholarworks.bgsu.edu/bio_sci_pub/10
https://doi.org/10.1371/journal.pone.0067221
https://scholarworks.bgsu.edu/context/bio_sci_pub/article/1014/viewcontent/rogers_subglacial.pdf
genre Antarc*
Antarctica
ice core
genre_facet Antarc*
Antarctica
ice core
op_source Biological Sciences Faculty Publications
op_relation https://scholarworks.bgsu.edu/bio_sci_pub/10
doi:10.1371/journal.pone.0067221
https://scholarworks.bgsu.edu/context/bio_sci_pub/article/1014/viewcontent/rogers_subglacial.pdf
op_rights http://creativecommons.org/licenses/by/3.0/
op_doi https://doi.org/10.1371/journal.pone.0067221
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