A total of 219 metagenome-assembled genomes of microorganisms from Icelandic marine waters

<jats:p>Marine microorganisms contribute to the health of the global ocean by supporting the marine food web and regulating biogeochemical cycles. Assessing marine microbial diversity is a crucial step towards understanding the global ocean. The waters surrounding Iceland are a complex environ...

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Published in:PeerJ
Main Authors: Jégousse, Clara, Vannier, Pauline, Groben, René, Glöckner, Frank Oliver, Marteinsson, Viggó
Format: Article in Journal/Newspaper
Language:unknown
Published: PeerJ 2021
Subjects:
Online Access:https://epic.awi.de/id/eprint/57488/
https://epic.awi.de/id/eprint/57488/1/A%20total%20of%20219%20metagenome-assembled%20genomes%20of%20microorganisms%20from%20Icelandic%20marine%20waters.pdf
https://hdl.handle.net/10013/epic.4623ba9d-61de-4472-8300-addb2c5d0f56
id ftawi:oai:epic.awi.de:57488
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spelling ftawi:oai:epic.awi.de:57488 2023-07-16T03:59:09+02:00 A total of 219 metagenome-assembled genomes of microorganisms from Icelandic marine waters Jégousse, Clara Vannier, Pauline Groben, René Glöckner, Frank Oliver Marteinsson, Viggó 2021-04-02 application/pdf https://epic.awi.de/id/eprint/57488/ https://epic.awi.de/id/eprint/57488/1/A%20total%20of%20219%20metagenome-assembled%20genomes%20of%20microorganisms%20from%20Icelandic%20marine%20waters.pdf https://hdl.handle.net/10013/epic.4623ba9d-61de-4472-8300-addb2c5d0f56 unknown PeerJ https://epic.awi.de/id/eprint/57488/1/A%20total%20of%20219%20metagenome-assembled%20genomes%20of%20microorganisms%20from%20Icelandic%20marine%20waters.pdf Jégousse, C. , Vannier, P. , Groben, R. , Glöckner, F. O. orcid:0000-0001-8528-9023 and Marteinsson, V. (2021) A total of 219 metagenome-assembled genomes of microorganisms from Icelandic marine waters , PeerJ, 9 , e11112-e11112 . doi:10.7717/peerj.11112 <https://doi.org/10.7717/peerj.11112> , hdl:10013/epic.4623ba9d-61de-4472-8300-addb2c5d0f56 EPIC3PeerJ, PeerJ, 9, pp. e11112-e11112, ISSN: 2167-8359 Article NonPeerReviewed 2021 ftawi https://doi.org/10.7717/peerj.11112 2023-06-25T23:19:57Z <jats:p>Marine microorganisms contribute to the health of the global ocean by supporting the marine food web and regulating biogeochemical cycles. Assessing marine microbial diversity is a crucial step towards understanding the global ocean. The waters surrounding Iceland are a complex environment where relatively warm salty waters from the Atlantic cool down and sink down to the deep. Microbial studies in this area have focused on photosynthetic micro- and nanoplankton mainly using microscopy and chlorophyll measurements. However, the diversity and function of the bacterial and archaeal picoplankton remains unknown. Here, we used a co-assembly approach supported by a marine mock community to reconstruct metagenome-assembled genomes (MAGs) from 31 metagenomes from the sea surface and seafloor of four oceanographic sampling stations sampled between 2015 and 2018. The resulting 219 MAGs include 191 bacterial, 26 archaeal and two eukaryotic MAGs to bridge the gap in our current knowledge of the global marine microbiome.</jats:p> Article in Journal/Newspaper Iceland Alfred Wegener Institute for Polar- and Marine Research (AWI): ePIC (electronic Publication Information Center) PeerJ 9 e11112
institution Open Polar
collection Alfred Wegener Institute for Polar- and Marine Research (AWI): ePIC (electronic Publication Information Center)
op_collection_id ftawi
language unknown
description <jats:p>Marine microorganisms contribute to the health of the global ocean by supporting the marine food web and regulating biogeochemical cycles. Assessing marine microbial diversity is a crucial step towards understanding the global ocean. The waters surrounding Iceland are a complex environment where relatively warm salty waters from the Atlantic cool down and sink down to the deep. Microbial studies in this area have focused on photosynthetic micro- and nanoplankton mainly using microscopy and chlorophyll measurements. However, the diversity and function of the bacterial and archaeal picoplankton remains unknown. Here, we used a co-assembly approach supported by a marine mock community to reconstruct metagenome-assembled genomes (MAGs) from 31 metagenomes from the sea surface and seafloor of four oceanographic sampling stations sampled between 2015 and 2018. The resulting 219 MAGs include 191 bacterial, 26 archaeal and two eukaryotic MAGs to bridge the gap in our current knowledge of the global marine microbiome.</jats:p>
format Article in Journal/Newspaper
author Jégousse, Clara
Vannier, Pauline
Groben, René
Glöckner, Frank Oliver
Marteinsson, Viggó
spellingShingle Jégousse, Clara
Vannier, Pauline
Groben, René
Glöckner, Frank Oliver
Marteinsson, Viggó
A total of 219 metagenome-assembled genomes of microorganisms from Icelandic marine waters
author_facet Jégousse, Clara
Vannier, Pauline
Groben, René
Glöckner, Frank Oliver
Marteinsson, Viggó
author_sort Jégousse, Clara
title A total of 219 metagenome-assembled genomes of microorganisms from Icelandic marine waters
title_short A total of 219 metagenome-assembled genomes of microorganisms from Icelandic marine waters
title_full A total of 219 metagenome-assembled genomes of microorganisms from Icelandic marine waters
title_fullStr A total of 219 metagenome-assembled genomes of microorganisms from Icelandic marine waters
title_full_unstemmed A total of 219 metagenome-assembled genomes of microorganisms from Icelandic marine waters
title_sort total of 219 metagenome-assembled genomes of microorganisms from icelandic marine waters
publisher PeerJ
publishDate 2021
url https://epic.awi.de/id/eprint/57488/
https://epic.awi.de/id/eprint/57488/1/A%20total%20of%20219%20metagenome-assembled%20genomes%20of%20microorganisms%20from%20Icelandic%20marine%20waters.pdf
https://hdl.handle.net/10013/epic.4623ba9d-61de-4472-8300-addb2c5d0f56
genre Iceland
genre_facet Iceland
op_source EPIC3PeerJ, PeerJ, 9, pp. e11112-e11112, ISSN: 2167-8359
op_relation https://epic.awi.de/id/eprint/57488/1/A%20total%20of%20219%20metagenome-assembled%20genomes%20of%20microorganisms%20from%20Icelandic%20marine%20waters.pdf
Jégousse, C. , Vannier, P. , Groben, R. , Glöckner, F. O. orcid:0000-0001-8528-9023 and Marteinsson, V. (2021) A total of 219 metagenome-assembled genomes of microorganisms from Icelandic marine waters , PeerJ, 9 , e11112-e11112 . doi:10.7717/peerj.11112 <https://doi.org/10.7717/peerj.11112> , hdl:10013/epic.4623ba9d-61de-4472-8300-addb2c5d0f56
op_doi https://doi.org/10.7717/peerj.11112
container_title PeerJ
container_volume 9
container_start_page e11112
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