Metagenome-assembled genomes from active layer in Ny Ålesund, Svalbard (79°N) show population dynamics related to seasonal thawing and soil depth

The active layer of permafrost in Ny Ålesund, Svalbard (79°N), is increasing in thickness at a rate of ~one vertical centimeter per year in most locations around the Bayelva River in the Leirhaugen glacier moraine. Microbes in the active layers may drive organic carbon degradation and greenhouse gas...

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Main Authors: Sipes, Katie, Tomaino, Michael, Paul, Raegan, Liang, Renxing, Garcia, Sarahi, Onstott, Tullis C., Boike, Julia, Vishnivetskaya, Tatiana A., Lloyd, Karen G.
Format: Conference Object
Language:unknown
Published: 2021
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Online Access:https://epic.awi.de/id/eprint/55410/
https://hdl.handle.net/10013/epic.6fd3f75a-f873-4460-a410-584b93a25f14
id ftawi:oai:epic.awi.de:55410
record_format openpolar
spelling ftawi:oai:epic.awi.de:55410 2024-09-15T18:07:57+00:00 Metagenome-assembled genomes from active layer in Ny Ålesund, Svalbard (79°N) show population dynamics related to seasonal thawing and soil depth Sipes, Katie Tomaino, Michael Paul, Raegan Liang, Renxing Garcia, Sarahi Onstott, Tullis C. Boike, Julia Vishnivetskaya, Tatiana A. Lloyd, Karen G. 2021-12-13 https://epic.awi.de/id/eprint/55410/ https://hdl.handle.net/10013/epic.6fd3f75a-f873-4460-a410-584b93a25f14 unknown Sipes, K. , Tomaino, M. , Paul, R. , Liang, R. , Garcia, S. , Onstott, T. C. , Boike, J. orcid:0000-0002-5875-2112 , Vishnivetskaya, T. A. and Lloyd, K. G. (2021) Metagenome-assembled genomes from active layer in Ny Ålesund, Svalbard (79°N) show population dynamics related to seasonal thawing and soil depth , AGU Fall Meeting, New Orleans, LA, USA/Online, 13 December 2021 - 17 December 2021 . hdl:10013/epic.6fd3f75a-f873-4460-a410-584b93a25f14 EPIC3AGU Fall Meeting, New Orleans, LA, USA/Online, 2021-12-13-2021-12-17 Conference notRev 2021 ftawi 2024-06-24T04:27:29Z The active layer of permafrost in Ny Ålesund, Svalbard (79°N), is increasing in thickness at a rate of ~one vertical centimeter per year in most locations around the Bayelva River in the Leirhaugen glacier moraine. Microbes in the active layers may drive organic carbon degradation and greenhouse gas production, creating a positive feedback on climate change. However, the microbial metabolisms relating to the environmental geochemistry and population dynamics have not been well characterized. We tested if organismal abundance was related to site or stratigraphy by analyzing metagenome assembled genomes (MAGs) from 56 highly resolved intervals of five active layer permafrost sites. Two sites were collected in the winter time (April 2018) and three were collected in the summer (September 2019). The MAGs’ read recruitment to metagenome libraries showed an Actinobacteria population that was dominant when the soils were thawed (September 2019) and when the surface soil were covered in snow (April 2018). Inversely, another group of Actinobacteria dominated the deeper depths while the soils were frozen and were nearly absent during the thawed/summer season. We show that microbial populations in the Svalbard active layer shift by depth and season, maintaining populations of continuously metabolically active microbes at all depths, year-round. Conference Object glacier Ny Ålesund Ny-Ålesund permafrost Svalbard Alfred Wegener Institute for Polar- and Marine Research (AWI): ePIC (electronic Publication Information Center)
institution Open Polar
collection Alfred Wegener Institute for Polar- and Marine Research (AWI): ePIC (electronic Publication Information Center)
op_collection_id ftawi
language unknown
description The active layer of permafrost in Ny Ålesund, Svalbard (79°N), is increasing in thickness at a rate of ~one vertical centimeter per year in most locations around the Bayelva River in the Leirhaugen glacier moraine. Microbes in the active layers may drive organic carbon degradation and greenhouse gas production, creating a positive feedback on climate change. However, the microbial metabolisms relating to the environmental geochemistry and population dynamics have not been well characterized. We tested if organismal abundance was related to site or stratigraphy by analyzing metagenome assembled genomes (MAGs) from 56 highly resolved intervals of five active layer permafrost sites. Two sites were collected in the winter time (April 2018) and three were collected in the summer (September 2019). The MAGs’ read recruitment to metagenome libraries showed an Actinobacteria population that was dominant when the soils were thawed (September 2019) and when the surface soil were covered in snow (April 2018). Inversely, another group of Actinobacteria dominated the deeper depths while the soils were frozen and were nearly absent during the thawed/summer season. We show that microbial populations in the Svalbard active layer shift by depth and season, maintaining populations of continuously metabolically active microbes at all depths, year-round.
format Conference Object
author Sipes, Katie
Tomaino, Michael
Paul, Raegan
Liang, Renxing
Garcia, Sarahi
Onstott, Tullis C.
Boike, Julia
Vishnivetskaya, Tatiana A.
Lloyd, Karen G.
spellingShingle Sipes, Katie
Tomaino, Michael
Paul, Raegan
Liang, Renxing
Garcia, Sarahi
Onstott, Tullis C.
Boike, Julia
Vishnivetskaya, Tatiana A.
Lloyd, Karen G.
Metagenome-assembled genomes from active layer in Ny Ålesund, Svalbard (79°N) show population dynamics related to seasonal thawing and soil depth
author_facet Sipes, Katie
Tomaino, Michael
Paul, Raegan
Liang, Renxing
Garcia, Sarahi
Onstott, Tullis C.
Boike, Julia
Vishnivetskaya, Tatiana A.
Lloyd, Karen G.
author_sort Sipes, Katie
title Metagenome-assembled genomes from active layer in Ny Ålesund, Svalbard (79°N) show population dynamics related to seasonal thawing and soil depth
title_short Metagenome-assembled genomes from active layer in Ny Ålesund, Svalbard (79°N) show population dynamics related to seasonal thawing and soil depth
title_full Metagenome-assembled genomes from active layer in Ny Ålesund, Svalbard (79°N) show population dynamics related to seasonal thawing and soil depth
title_fullStr Metagenome-assembled genomes from active layer in Ny Ålesund, Svalbard (79°N) show population dynamics related to seasonal thawing and soil depth
title_full_unstemmed Metagenome-assembled genomes from active layer in Ny Ålesund, Svalbard (79°N) show population dynamics related to seasonal thawing and soil depth
title_sort metagenome-assembled genomes from active layer in ny ålesund, svalbard (79°n) show population dynamics related to seasonal thawing and soil depth
publishDate 2021
url https://epic.awi.de/id/eprint/55410/
https://hdl.handle.net/10013/epic.6fd3f75a-f873-4460-a410-584b93a25f14
genre glacier
Ny Ålesund
Ny-Ålesund
permafrost
Svalbard
genre_facet glacier
Ny Ålesund
Ny-Ålesund
permafrost
Svalbard
op_source EPIC3AGU Fall Meeting, New Orleans, LA, USA/Online, 2021-12-13-2021-12-17
op_relation Sipes, K. , Tomaino, M. , Paul, R. , Liang, R. , Garcia, S. , Onstott, T. C. , Boike, J. orcid:0000-0002-5875-2112 , Vishnivetskaya, T. A. and Lloyd, K. G. (2021) Metagenome-assembled genomes from active layer in Ny Ålesund, Svalbard (79°N) show population dynamics related to seasonal thawing and soil depth , AGU Fall Meeting, New Orleans, LA, USA/Online, 13 December 2021 - 17 December 2021 . hdl:10013/epic.6fd3f75a-f873-4460-a410-584b93a25f14
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