Analysis of organellar genomes in brown algae reveals an independent introduction of similar foreign sequences into the mitochondrial genome

Kelp species (Laminariales, Phaeophyceae) are globally widespread along temperate to Polar rocky coastal lines. Here we analyse the mitochondrial and chloroplast genomes of Laminaria rodriguezii, in comparison to the organellar genomes of other kelp species. We also provide the complete mitochondria...

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Published in:Genomics
Main Authors: Shivani, Rana, Valentin, Klaus-Ulrich, Riehl, Jana, Blanfuné, Aurélie, Reynes, Lauric, Thibaut, Thierry, Bartsch, Inka, Eichinger, Ludwig, Gloeckner, Gernot
Format: Article in Journal/Newspaper
Language:unknown
Published: Elsvier 2021
Subjects:
Online Access:https://epic.awi.de/id/eprint/53580/
https://epic.awi.de/id/eprint/53580/1/RanaetalGenomics.pdf
https://doi.org/10.1016/j.ygeno.2021.01.003
https://hdl.handle.net/10013/epic.3da49c87-0571-4844-8a79-64261a14fc7a
id ftawi:oai:epic.awi.de:53580
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spelling ftawi:oai:epic.awi.de:53580 2024-09-09T19:25:10+00:00 Analysis of organellar genomes in brown algae reveals an independent introduction of similar foreign sequences into the mitochondrial genome Shivani, Rana Valentin, Klaus-Ulrich Riehl, Jana Blanfuné, Aurélie Reynes, Lauric Thibaut, Thierry Bartsch, Inka Eichinger, Ludwig Gloeckner, Gernot 2021-01-22 application/pdf https://epic.awi.de/id/eprint/53580/ https://epic.awi.de/id/eprint/53580/1/RanaetalGenomics.pdf https://doi.org/10.1016/j.ygeno.2021.01.003 https://hdl.handle.net/10013/epic.3da49c87-0571-4844-8a79-64261a14fc7a unknown Elsvier https://epic.awi.de/id/eprint/53580/1/RanaetalGenomics.pdf Shivani, R. , Valentin, K. U. , Riehl, J. , Blanfuné, A. , Reynes, L. , Thibaut, T. , Bartsch, I. orcid:0000-0001-7609-2149 , Eichinger, L. and Gloeckner, G. (2021) Analysis of organellar genomes in brown algae reveals an independent introduction of similar foreign sequences into the mitochondrial genome , Genomics, 113 , pp. 646-654 . doi:10.1016/j.ygeno.2021.01.003 <https://doi.org/10.1016/j.ygeno.2021.01.003> , hdl:10013/epic.3da49c87-0571-4844-8a79-64261a14fc7a EPIC3Genomics, Elsvier, 113, pp. 646-654 Article peerRev info:eu-repo/semantics/article 2021 ftawi https://doi.org/10.1016/j.ygeno.2021.01.003 2024-06-24T04:26:11Z Kelp species (Laminariales, Phaeophyceae) are globally widespread along temperate to Polar rocky coastal lines. Here we analyse the mitochondrial and chloroplast genomes of Laminaria rodriguezii, in comparison to the organellar genomes of other kelp species. We also provide the complete mitochondrial genome sequence of another endemic kelp species from a Polar habitat, the Arctic Laminaria solidungula. We compare phylogenetic trees derived from twenty complete mitochondrial and seven complete chloroplast kelp genomes. Interestingly, we found a stretch of more than 700 bp in the mitochondrial genome of L.rodriguezii, which is not present in any other yet sequenced member of the Phaeophyceae. This stretch matches a protein coding region in the mitochondrial genome from Desmarestia viridis, another brown seaweed. Their high similarity suggests that these sequences originated through independent introduction into the two species. Their origin could have been by infection by yet unknown similar mitoviruses, currently only known from fungi and plants. Article in Journal/Newspaper Arctic Alfred Wegener Institute for Polar- and Marine Research (AWI): ePIC (electronic Publication Information Center) Arctic Genomics 113 2 646 654
institution Open Polar
collection Alfred Wegener Institute for Polar- and Marine Research (AWI): ePIC (electronic Publication Information Center)
op_collection_id ftawi
language unknown
description Kelp species (Laminariales, Phaeophyceae) are globally widespread along temperate to Polar rocky coastal lines. Here we analyse the mitochondrial and chloroplast genomes of Laminaria rodriguezii, in comparison to the organellar genomes of other kelp species. We also provide the complete mitochondrial genome sequence of another endemic kelp species from a Polar habitat, the Arctic Laminaria solidungula. We compare phylogenetic trees derived from twenty complete mitochondrial and seven complete chloroplast kelp genomes. Interestingly, we found a stretch of more than 700 bp in the mitochondrial genome of L.rodriguezii, which is not present in any other yet sequenced member of the Phaeophyceae. This stretch matches a protein coding region in the mitochondrial genome from Desmarestia viridis, another brown seaweed. Their high similarity suggests that these sequences originated through independent introduction into the two species. Their origin could have been by infection by yet unknown similar mitoviruses, currently only known from fungi and plants.
format Article in Journal/Newspaper
author Shivani, Rana
Valentin, Klaus-Ulrich
Riehl, Jana
Blanfuné, Aurélie
Reynes, Lauric
Thibaut, Thierry
Bartsch, Inka
Eichinger, Ludwig
Gloeckner, Gernot
spellingShingle Shivani, Rana
Valentin, Klaus-Ulrich
Riehl, Jana
Blanfuné, Aurélie
Reynes, Lauric
Thibaut, Thierry
Bartsch, Inka
Eichinger, Ludwig
Gloeckner, Gernot
Analysis of organellar genomes in brown algae reveals an independent introduction of similar foreign sequences into the mitochondrial genome
author_facet Shivani, Rana
Valentin, Klaus-Ulrich
Riehl, Jana
Blanfuné, Aurélie
Reynes, Lauric
Thibaut, Thierry
Bartsch, Inka
Eichinger, Ludwig
Gloeckner, Gernot
author_sort Shivani, Rana
title Analysis of organellar genomes in brown algae reveals an independent introduction of similar foreign sequences into the mitochondrial genome
title_short Analysis of organellar genomes in brown algae reveals an independent introduction of similar foreign sequences into the mitochondrial genome
title_full Analysis of organellar genomes in brown algae reveals an independent introduction of similar foreign sequences into the mitochondrial genome
title_fullStr Analysis of organellar genomes in brown algae reveals an independent introduction of similar foreign sequences into the mitochondrial genome
title_full_unstemmed Analysis of organellar genomes in brown algae reveals an independent introduction of similar foreign sequences into the mitochondrial genome
title_sort analysis of organellar genomes in brown algae reveals an independent introduction of similar foreign sequences into the mitochondrial genome
publisher Elsvier
publishDate 2021
url https://epic.awi.de/id/eprint/53580/
https://epic.awi.de/id/eprint/53580/1/RanaetalGenomics.pdf
https://doi.org/10.1016/j.ygeno.2021.01.003
https://hdl.handle.net/10013/epic.3da49c87-0571-4844-8a79-64261a14fc7a
geographic Arctic
geographic_facet Arctic
genre Arctic
genre_facet Arctic
op_source EPIC3Genomics, Elsvier, 113, pp. 646-654
op_relation https://epic.awi.de/id/eprint/53580/1/RanaetalGenomics.pdf
Shivani, R. , Valentin, K. U. , Riehl, J. , Blanfuné, A. , Reynes, L. , Thibaut, T. , Bartsch, I. orcid:0000-0001-7609-2149 , Eichinger, L. and Gloeckner, G. (2021) Analysis of organellar genomes in brown algae reveals an independent introduction of similar foreign sequences into the mitochondrial genome , Genomics, 113 , pp. 646-654 . doi:10.1016/j.ygeno.2021.01.003 <https://doi.org/10.1016/j.ygeno.2021.01.003> , hdl:10013/epic.3da49c87-0571-4844-8a79-64261a14fc7a
op_doi https://doi.org/10.1016/j.ygeno.2021.01.003
container_title Genomics
container_volume 113
container_issue 2
container_start_page 646
op_container_end_page 654
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