Clock gene expression patterns in brain and eyestalk tissue of freshly caught Antarctic krill, Euphausia superba, during winter.

The high-latitude Antarctic krill, Euphausia superba, is a key species in the Southern Ocean, a region with extreme seasonal and daily changes in photoperiod (day length), light intensity, sea-ice extent, and food availability. In particular, changes in environmental light regimes have been shown to...

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Main Author: Constanze, Bark
Format: Thesis
Language:unknown
Published: Constanze Bark 2019
Subjects:
Online Access:https://epic.awi.de/id/eprint/52180/
https://epic.awi.de/id/eprint/52180/1/MA_Constanze_Bark.pdf
https://hdl.handle.net/10013/epic.974d375b-3623-4ec9-963c-2b9f4917803a
https://hdl.handle.net/
id ftawi:oai:epic.awi.de:52180
record_format openpolar
spelling ftawi:oai:epic.awi.de:52180 2023-05-15T13:45:21+02:00 Clock gene expression patterns in brain and eyestalk tissue of freshly caught Antarctic krill, Euphausia superba, during winter. Constanze, Bark 2019-09-09 application/pdf https://epic.awi.de/id/eprint/52180/ https://epic.awi.de/id/eprint/52180/1/MA_Constanze_Bark.pdf https://hdl.handle.net/10013/epic.974d375b-3623-4ec9-963c-2b9f4917803a https://hdl.handle.net/ unknown Constanze Bark https://epic.awi.de/id/eprint/52180/1/MA_Constanze_Bark.pdf https://hdl.handle.net/ Constanze, B. (2019) Clock gene expression patterns in brain and eyestalk tissue of freshly caught Antarctic krill, Euphausia superba, during winter. , Master thesis, University of Oldenburg. hdl:10013/epic.974d375b-3623-4ec9-963c-2b9f4917803a EPIC3Constanze Bark, 63 p. Thesis notRev 2019 ftawi 2021-12-24T15:45:36Z The high-latitude Antarctic krill, Euphausia superba, is a key species in the Southern Ocean, a region with extreme seasonal and daily changes in photoperiod (day length), light intensity, sea-ice extent, and food availability. In particular, changes in environmental light regimes have been shown to strongly influence krill circadian clock mechanisms and, by extension, synchronized metabolic or physiological output functions. However, knowledge of clock gene functions and regulations in Antarctic krill is still limited, especially with regard to clock gene products, their distribution, and their impact on oscillatory rhythmicity and chronobiological functions. In particular, it is still unclear whether or not the circadian clock might be functioning in krill during summer and winter, when due to the high latitude krill are exposed to near constant light and near constant darkness respectively. This study aims to provide a first basic insight into clock gene expression in wild Antarctic krill during winter conditions. Besides, methodological optimization was attempted to identify putative tissue-specific rhythmic gene expression patterns in brain and eyestalks. In summary, significant 24 h and 16 h oscillatory rhythms could be identified in the relative gene expression of three important clock genes, Cyc, Sgg, and Tim, as well as in the metabolic gene Atpg in both krill brain and eyestalks. Additionally, nine of ten tested clock genes displayed a general tendency for upregulation in the early night in both tissues during low to even absent light regime. The results of the present study suggest that krill brain and eyestalks are equally important for clock gene expression due to similar detected amplitudes and therefore the analysis of whole krill heads is recommended for further studies. Furthermore, the results suggest that the circadian clock might be still active in wild krill during winter, despite the extremely low levels of day light to which the animals might be exposed. Future investigations concerning the regulation of endogenous timing systems and rhythmic functions in Antarctic krill might help to understand how circadian functions might be preserved during summer and winter at high latitudes and also how these might be affected by potential environmental alternations driven by climate change. Thesis Antarc* Antarctic Antarctic Krill Euphausia superba Sea ice Southern Ocean Alfred Wegener Institute for Polar- and Marine Research (AWI): ePIC (electronic Publication Information Center) Antarctic Southern Ocean
institution Open Polar
collection Alfred Wegener Institute for Polar- and Marine Research (AWI): ePIC (electronic Publication Information Center)
op_collection_id ftawi
language unknown
description The high-latitude Antarctic krill, Euphausia superba, is a key species in the Southern Ocean, a region with extreme seasonal and daily changes in photoperiod (day length), light intensity, sea-ice extent, and food availability. In particular, changes in environmental light regimes have been shown to strongly influence krill circadian clock mechanisms and, by extension, synchronized metabolic or physiological output functions. However, knowledge of clock gene functions and regulations in Antarctic krill is still limited, especially with regard to clock gene products, their distribution, and their impact on oscillatory rhythmicity and chronobiological functions. In particular, it is still unclear whether or not the circadian clock might be functioning in krill during summer and winter, when due to the high latitude krill are exposed to near constant light and near constant darkness respectively. This study aims to provide a first basic insight into clock gene expression in wild Antarctic krill during winter conditions. Besides, methodological optimization was attempted to identify putative tissue-specific rhythmic gene expression patterns in brain and eyestalks. In summary, significant 24 h and 16 h oscillatory rhythms could be identified in the relative gene expression of three important clock genes, Cyc, Sgg, and Tim, as well as in the metabolic gene Atpg in both krill brain and eyestalks. Additionally, nine of ten tested clock genes displayed a general tendency for upregulation in the early night in both tissues during low to even absent light regime. The results of the present study suggest that krill brain and eyestalks are equally important for clock gene expression due to similar detected amplitudes and therefore the analysis of whole krill heads is recommended for further studies. Furthermore, the results suggest that the circadian clock might be still active in wild krill during winter, despite the extremely low levels of day light to which the animals might be exposed. Future investigations concerning the regulation of endogenous timing systems and rhythmic functions in Antarctic krill might help to understand how circadian functions might be preserved during summer and winter at high latitudes and also how these might be affected by potential environmental alternations driven by climate change.
format Thesis
author Constanze, Bark
spellingShingle Constanze, Bark
Clock gene expression patterns in brain and eyestalk tissue of freshly caught Antarctic krill, Euphausia superba, during winter.
author_facet Constanze, Bark
author_sort Constanze, Bark
title Clock gene expression patterns in brain and eyestalk tissue of freshly caught Antarctic krill, Euphausia superba, during winter.
title_short Clock gene expression patterns in brain and eyestalk tissue of freshly caught Antarctic krill, Euphausia superba, during winter.
title_full Clock gene expression patterns in brain and eyestalk tissue of freshly caught Antarctic krill, Euphausia superba, during winter.
title_fullStr Clock gene expression patterns in brain and eyestalk tissue of freshly caught Antarctic krill, Euphausia superba, during winter.
title_full_unstemmed Clock gene expression patterns in brain and eyestalk tissue of freshly caught Antarctic krill, Euphausia superba, during winter.
title_sort clock gene expression patterns in brain and eyestalk tissue of freshly caught antarctic krill, euphausia superba, during winter.
publisher Constanze Bark
publishDate 2019
url https://epic.awi.de/id/eprint/52180/
https://epic.awi.de/id/eprint/52180/1/MA_Constanze_Bark.pdf
https://hdl.handle.net/10013/epic.974d375b-3623-4ec9-963c-2b9f4917803a
https://hdl.handle.net/
geographic Antarctic
Southern Ocean
geographic_facet Antarctic
Southern Ocean
genre Antarc*
Antarctic
Antarctic Krill
Euphausia superba
Sea ice
Southern Ocean
genre_facet Antarc*
Antarctic
Antarctic Krill
Euphausia superba
Sea ice
Southern Ocean
op_source EPIC3Constanze Bark, 63 p.
op_relation https://epic.awi.de/id/eprint/52180/1/MA_Constanze_Bark.pdf
https://hdl.handle.net/
Constanze, B. (2019) Clock gene expression patterns in brain and eyestalk tissue of freshly caught Antarctic krill, Euphausia superba, during winter. , Master thesis, University of Oldenburg. hdl:10013/epic.974d375b-3623-4ec9-963c-2b9f4917803a
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