Prokaryotic Diversity and Community Patterns in Antarctic Continental Shelf Sponges

Marine sponges (Phylum Porifera) are globally distributed within marine and freshwater ecosystems. In addition, sponges host dense and diverse prokaryotic communities, which are potential sources of novel bioactive metabolites and other complex compounds. Those sponge-derived natural products can sp...

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Published in:Frontiers in Marine Science
Main Authors: Steinert, Georg, Wemheuer, Bernd, Janussen, Dorte, Erpenbeck, Dirk, Daniel, Rolf, Simon, Meinhard, Brinkhoff, Thorsten, Schupp, Peter
Format: Article in Journal/Newspaper
Language:unknown
Published: Frontiers Media S.A. 2019
Subjects:
Online Access:https://epic.awi.de/id/eprint/49892/
https://epic.awi.de/id/eprint/49892/1/Steinert_et_al_2019_Prokaryotic_Diversity_and_Community_Patterns_in_Antarctic_Continental_Shelf_Sponges.pdf
https://hdl.handle.net/10013/epic.316e682a-e505-4478-93ce-e3063f9b4648
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spelling ftawi:oai:epic.awi.de:49892 2024-09-15T17:47:09+00:00 Prokaryotic Diversity and Community Patterns in Antarctic Continental Shelf Sponges Steinert, Georg Wemheuer, Bernd Janussen, Dorte Erpenbeck, Dirk Daniel, Rolf Simon, Meinhard Brinkhoff, Thorsten Schupp, Peter 2019-06-05 application/pdf https://epic.awi.de/id/eprint/49892/ https://epic.awi.de/id/eprint/49892/1/Steinert_et_al_2019_Prokaryotic_Diversity_and_Community_Patterns_in_Antarctic_Continental_Shelf_Sponges.pdf https://hdl.handle.net/10013/epic.316e682a-e505-4478-93ce-e3063f9b4648 unknown Frontiers Media S.A. https://epic.awi.de/id/eprint/49892/1/Steinert_et_al_2019_Prokaryotic_Diversity_and_Community_Patterns_in_Antarctic_Continental_Shelf_Sponges.pdf Steinert, G. , Wemheuer, B. , Janussen, D. , Erpenbeck, D. , Daniel, R. , Simon, M. , Brinkhoff, T. and Schupp, P. (2019) Prokaryotic Diversity and Community Patterns in Antarctic Continental Shelf Sponges , Frontiers in Marine Science, 6 (297) . doi:10.3389/fmars.2019.00297 <https://doi.org/10.3389/fmars.2019.00297> , hdl:10013/epic.316e682a-e505-4478-93ce-e3063f9b4648 EPIC3Frontiers in Marine Science, Frontiers Media S.A., 6(297), ISSN: 2296-7745 Article isiRev 2019 ftawi https://doi.org/10.3389/fmars.2019.00297 2024-06-24T04:22:11Z Marine sponges (Phylum Porifera) are globally distributed within marine and freshwater ecosystems. In addition, sponges host dense and diverse prokaryotic communities, which are potential sources of novel bioactive metabolites and other complex compounds. Those sponge-derived natural products can span a broad spectrum of bioactivities, from antibacterial and antifungal to antitumor and antiviral compounds. However, most analyses concerning sponge-associated prokaryotes have mainly focused on conveniently accessible relatively shallow sampling locations for sponges. Hence, knowledge of community composition, host-relatedness and biotechnological potential of prokaryotic associations in temperate and cold-water sponges from greater depths (mesophotic to mesopelagic zones) is still scarce. Therefore, we analyzed the prokaryotic community diversity of four phylogenetically divergent sponge taxa from mesophotic to mesopelagic depths of Antarctic shelf at different depths and locations in the region of the South Shetland Islands using 16S rRNA gene amplicon-based sequencing. In addition, we predicted functional profiles applying Tax4Fun from metagenomic 16S rRNA gene data to estimate their biotechnological capability and possible roles as sources of novel bioactive compounds. We found indications that cold and deep-water sponges exhibit host-specific prokaryotic communities, despite different sampling sites and depths. Functional prediction analysis suggests that the associated prokaryotes may enhance the roles of sponges in biodegradation processes of xenobiotics and their involvement in the biosynthesis of secondary metabolites. Article in Journal/Newspaper Antarc* Antarctic South Shetland Islands Alfred Wegener Institute for Polar- and Marine Research (AWI): ePIC (electronic Publication Information Center) Frontiers in Marine Science 6
institution Open Polar
collection Alfred Wegener Institute for Polar- and Marine Research (AWI): ePIC (electronic Publication Information Center)
op_collection_id ftawi
language unknown
description Marine sponges (Phylum Porifera) are globally distributed within marine and freshwater ecosystems. In addition, sponges host dense and diverse prokaryotic communities, which are potential sources of novel bioactive metabolites and other complex compounds. Those sponge-derived natural products can span a broad spectrum of bioactivities, from antibacterial and antifungal to antitumor and antiviral compounds. However, most analyses concerning sponge-associated prokaryotes have mainly focused on conveniently accessible relatively shallow sampling locations for sponges. Hence, knowledge of community composition, host-relatedness and biotechnological potential of prokaryotic associations in temperate and cold-water sponges from greater depths (mesophotic to mesopelagic zones) is still scarce. Therefore, we analyzed the prokaryotic community diversity of four phylogenetically divergent sponge taxa from mesophotic to mesopelagic depths of Antarctic shelf at different depths and locations in the region of the South Shetland Islands using 16S rRNA gene amplicon-based sequencing. In addition, we predicted functional profiles applying Tax4Fun from metagenomic 16S rRNA gene data to estimate their biotechnological capability and possible roles as sources of novel bioactive compounds. We found indications that cold and deep-water sponges exhibit host-specific prokaryotic communities, despite different sampling sites and depths. Functional prediction analysis suggests that the associated prokaryotes may enhance the roles of sponges in biodegradation processes of xenobiotics and their involvement in the biosynthesis of secondary metabolites.
format Article in Journal/Newspaper
author Steinert, Georg
Wemheuer, Bernd
Janussen, Dorte
Erpenbeck, Dirk
Daniel, Rolf
Simon, Meinhard
Brinkhoff, Thorsten
Schupp, Peter
spellingShingle Steinert, Georg
Wemheuer, Bernd
Janussen, Dorte
Erpenbeck, Dirk
Daniel, Rolf
Simon, Meinhard
Brinkhoff, Thorsten
Schupp, Peter
Prokaryotic Diversity and Community Patterns in Antarctic Continental Shelf Sponges
author_facet Steinert, Georg
Wemheuer, Bernd
Janussen, Dorte
Erpenbeck, Dirk
Daniel, Rolf
Simon, Meinhard
Brinkhoff, Thorsten
Schupp, Peter
author_sort Steinert, Georg
title Prokaryotic Diversity and Community Patterns in Antarctic Continental Shelf Sponges
title_short Prokaryotic Diversity and Community Patterns in Antarctic Continental Shelf Sponges
title_full Prokaryotic Diversity and Community Patterns in Antarctic Continental Shelf Sponges
title_fullStr Prokaryotic Diversity and Community Patterns in Antarctic Continental Shelf Sponges
title_full_unstemmed Prokaryotic Diversity and Community Patterns in Antarctic Continental Shelf Sponges
title_sort prokaryotic diversity and community patterns in antarctic continental shelf sponges
publisher Frontiers Media S.A.
publishDate 2019
url https://epic.awi.de/id/eprint/49892/
https://epic.awi.de/id/eprint/49892/1/Steinert_et_al_2019_Prokaryotic_Diversity_and_Community_Patterns_in_Antarctic_Continental_Shelf_Sponges.pdf
https://hdl.handle.net/10013/epic.316e682a-e505-4478-93ce-e3063f9b4648
genre Antarc*
Antarctic
South Shetland Islands
genre_facet Antarc*
Antarctic
South Shetland Islands
op_source EPIC3Frontiers in Marine Science, Frontiers Media S.A., 6(297), ISSN: 2296-7745
op_relation https://epic.awi.de/id/eprint/49892/1/Steinert_et_al_2019_Prokaryotic_Diversity_and_Community_Patterns_in_Antarctic_Continental_Shelf_Sponges.pdf
Steinert, G. , Wemheuer, B. , Janussen, D. , Erpenbeck, D. , Daniel, R. , Simon, M. , Brinkhoff, T. and Schupp, P. (2019) Prokaryotic Diversity and Community Patterns in Antarctic Continental Shelf Sponges , Frontiers in Marine Science, 6 (297) . doi:10.3389/fmars.2019.00297 <https://doi.org/10.3389/fmars.2019.00297> , hdl:10013/epic.316e682a-e505-4478-93ce-e3063f9b4648
op_doi https://doi.org/10.3389/fmars.2019.00297
container_title Frontiers in Marine Science
container_volume 6
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