The affiliation of Hexasterias problematica and Halodinium verrucatum sp. nov. to ciliate cysts based on molecular phylogeny and cyst wall composition

Species in the genera Hexasterias and Halodinium have been recorded over the last decades as acritarchs in palynological and/or plankton studies. In paleoenvironmental studies, these resting stages are often interpreted as indicators of freshwater input. The biological affinity of these genera has n...

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Published in:European Journal of Protistology
Main Authors: Gurdebeke, Pieter R., Mertens, Kenneth, Takano, Yoshihito, Yamaguchi, Aika, Bogus, Kara, Dunthorn, Micah, Matsuoka, Kazumi, Vrielinck, Henk, Louwye, Stephen
Format: Article in Journal/Newspaper
Language:English
Published: Elsevier Gmbh, Urban & Fischer Verlag 2018
Subjects:
Online Access:https://archimer.ifremer.fr/doc/00468/57970/64186.pdf
https://doi.org/10.1016/j.ejop.2018.09.002
https://archimer.ifremer.fr/doc/00468/57970/
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spelling ftarchimer:oai:archimer.ifremer.fr:57970 2023-05-15T15:08:36+02:00 The affiliation of Hexasterias problematica and Halodinium verrucatum sp. nov. to ciliate cysts based on molecular phylogeny and cyst wall composition Gurdebeke, Pieter R. Mertens, Kenneth Takano, Yoshihito Yamaguchi, Aika Bogus, Kara Dunthorn, Micah Matsuoka, Kazumi Vrielinck, Henk Louwye, Stephen 2018-10 application/pdf https://archimer.ifremer.fr/doc/00468/57970/64186.pdf https://doi.org/10.1016/j.ejop.2018.09.002 https://archimer.ifremer.fr/doc/00468/57970/ eng eng Elsevier Gmbh, Urban & Fischer Verlag https://archimer.ifremer.fr/doc/00468/57970/64186.pdf doi:10.1016/j.ejop.2018.09.002 https://archimer.ifremer.fr/doc/00468/57970/ info:eu-repo/semantics/openAccess restricted use European Journal Of Protistology (0932-4739) (Elsevier Gmbh, Urban & Fischer Verlag), 2018-10 , Vol. 66 , P. 115-135 Acritarch Ciliate cyst FTIR LSU-SSU rDNA Prostomatida Taxonomy text Publication info:eu-repo/semantics/article 2018 ftarchimer https://doi.org/10.1016/j.ejop.2018.09.002 2021-09-23T20:31:51Z Species in the genera Hexasterias and Halodinium have been recorded over the last decades as acritarchs in palynological and/or plankton studies. In paleoenvironmental studies, these resting stages are often interpreted as indicators of freshwater input. The biological affinity of these genera has never been definitely established. Here, a new species, Halodinium verrucatum sp. nov., is described and molecular evidence (single specimen SSU and LSU rDNA sequencing) reveals that both this new species and Hexasterias problematica, collected from sediment samples in the Skagerrak and Baltic Sea, are resting stages of prorodontid ciliates. Additionally, infrared spectroscopic analysis (micro-FTIR) of Hexasterias problematica and Halodinium spp. specimens indicates a carbohydrate-based composition of the cyst wall with evidence for nitrogen-containing functional groups. A similar composition is recorded for tintinnid loricae, which further supports the placement of Hexasterias and Halodinium as ciliate cysts, and the composition is consistent with the heterotrophic nature of ciliates. The morphologically similar species Radiosperma corbiferum has a comparable composition, suggesting a similar ciliate affinity and indicating the utility of micro-FTIR in understanding acritarch affinity. Hexasterias problematica typically occurs in coastal waters from temperate to arctic regions. Halodinium verrucatum sp. nov. is observed in temperate estuarine sediments in the northern hemisphere. Article in Journal/Newspaper Arctic Archimer (Archive Institutionnelle de l'Ifremer - Institut français de recherche pour l'exploitation de la mer) Arctic European Journal of Protistology 66 115 135
institution Open Polar
collection Archimer (Archive Institutionnelle de l'Ifremer - Institut français de recherche pour l'exploitation de la mer)
op_collection_id ftarchimer
language English
topic Acritarch
Ciliate cyst
FTIR
LSU-SSU rDNA
Prostomatida
Taxonomy
spellingShingle Acritarch
Ciliate cyst
FTIR
LSU-SSU rDNA
Prostomatida
Taxonomy
Gurdebeke, Pieter R.
Mertens, Kenneth
Takano, Yoshihito
Yamaguchi, Aika
Bogus, Kara
Dunthorn, Micah
Matsuoka, Kazumi
Vrielinck, Henk
Louwye, Stephen
The affiliation of Hexasterias problematica and Halodinium verrucatum sp. nov. to ciliate cysts based on molecular phylogeny and cyst wall composition
topic_facet Acritarch
Ciliate cyst
FTIR
LSU-SSU rDNA
Prostomatida
Taxonomy
description Species in the genera Hexasterias and Halodinium have been recorded over the last decades as acritarchs in palynological and/or plankton studies. In paleoenvironmental studies, these resting stages are often interpreted as indicators of freshwater input. The biological affinity of these genera has never been definitely established. Here, a new species, Halodinium verrucatum sp. nov., is described and molecular evidence (single specimen SSU and LSU rDNA sequencing) reveals that both this new species and Hexasterias problematica, collected from sediment samples in the Skagerrak and Baltic Sea, are resting stages of prorodontid ciliates. Additionally, infrared spectroscopic analysis (micro-FTIR) of Hexasterias problematica and Halodinium spp. specimens indicates a carbohydrate-based composition of the cyst wall with evidence for nitrogen-containing functional groups. A similar composition is recorded for tintinnid loricae, which further supports the placement of Hexasterias and Halodinium as ciliate cysts, and the composition is consistent with the heterotrophic nature of ciliates. The morphologically similar species Radiosperma corbiferum has a comparable composition, suggesting a similar ciliate affinity and indicating the utility of micro-FTIR in understanding acritarch affinity. Hexasterias problematica typically occurs in coastal waters from temperate to arctic regions. Halodinium verrucatum sp. nov. is observed in temperate estuarine sediments in the northern hemisphere.
format Article in Journal/Newspaper
author Gurdebeke, Pieter R.
Mertens, Kenneth
Takano, Yoshihito
Yamaguchi, Aika
Bogus, Kara
Dunthorn, Micah
Matsuoka, Kazumi
Vrielinck, Henk
Louwye, Stephen
author_facet Gurdebeke, Pieter R.
Mertens, Kenneth
Takano, Yoshihito
Yamaguchi, Aika
Bogus, Kara
Dunthorn, Micah
Matsuoka, Kazumi
Vrielinck, Henk
Louwye, Stephen
author_sort Gurdebeke, Pieter R.
title The affiliation of Hexasterias problematica and Halodinium verrucatum sp. nov. to ciliate cysts based on molecular phylogeny and cyst wall composition
title_short The affiliation of Hexasterias problematica and Halodinium verrucatum sp. nov. to ciliate cysts based on molecular phylogeny and cyst wall composition
title_full The affiliation of Hexasterias problematica and Halodinium verrucatum sp. nov. to ciliate cysts based on molecular phylogeny and cyst wall composition
title_fullStr The affiliation of Hexasterias problematica and Halodinium verrucatum sp. nov. to ciliate cysts based on molecular phylogeny and cyst wall composition
title_full_unstemmed The affiliation of Hexasterias problematica and Halodinium verrucatum sp. nov. to ciliate cysts based on molecular phylogeny and cyst wall composition
title_sort affiliation of hexasterias problematica and halodinium verrucatum sp. nov. to ciliate cysts based on molecular phylogeny and cyst wall composition
publisher Elsevier Gmbh, Urban & Fischer Verlag
publishDate 2018
url https://archimer.ifremer.fr/doc/00468/57970/64186.pdf
https://doi.org/10.1016/j.ejop.2018.09.002
https://archimer.ifremer.fr/doc/00468/57970/
geographic Arctic
geographic_facet Arctic
genre Arctic
genre_facet Arctic
op_source European Journal Of Protistology (0932-4739) (Elsevier Gmbh, Urban & Fischer Verlag), 2018-10 , Vol. 66 , P. 115-135
op_relation https://archimer.ifremer.fr/doc/00468/57970/64186.pdf
doi:10.1016/j.ejop.2018.09.002
https://archimer.ifremer.fr/doc/00468/57970/
op_rights info:eu-repo/semantics/openAccess
restricted use
op_doi https://doi.org/10.1016/j.ejop.2018.09.002
container_title European Journal of Protistology
container_volume 66
container_start_page 115
op_container_end_page 135
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