Diversity of cultured photosynthetic flagellates in the northeast Pacific and Arctic Oceans in summer

During the MALINA cruise (summer 2009), an extensive effort was undertaken to isolate phytoplankton strains from the northeast (NE) Pacific Ocean, the Bering Strait, the Chukchi Sea, and the Beaufort Sea. In order to characterise the main photosynthetic microorganisms occurring in the Arctic during...

Full description

Bibliographic Details
Published in:Biogeosciences
Main Authors: Balzano, S., Gourvil, P., Siano, Raffaele, Chanoine, M., Marie, D., Lessard, S., Sarno, D., Vaulot, Daniel
Format: Article in Journal/Newspaper
Language:English
Published: Copernicus Gesellschaft Mbh 2012
Subjects:
Online Access:https://archimer.ifremer.fr/doc/00114/22491/20172.pdf
https://archimer.ifremer.fr/doc/00114/22491/20173.pdf
https://doi.org/10.5194/bg-9-4553-2012
https://archimer.ifremer.fr/doc/00114/22491/
id ftarchimer:oai:archimer.ifremer.fr:22491
record_format openpolar
spelling ftarchimer:oai:archimer.ifremer.fr:22491 2023-05-15T14:46:06+02:00 Diversity of cultured photosynthetic flagellates in the northeast Pacific and Arctic Oceans in summer Balzano, S. Gourvil, P. Siano, Raffaele Chanoine, M. Marie, D. Lessard, S. Sarno, D. Vaulot, Daniel 2012 application/pdf https://archimer.ifremer.fr/doc/00114/22491/20172.pdf https://archimer.ifremer.fr/doc/00114/22491/20173.pdf https://doi.org/10.5194/bg-9-4553-2012 https://archimer.ifremer.fr/doc/00114/22491/ eng eng Copernicus Gesellschaft Mbh https://archimer.ifremer.fr/doc/00114/22491/20172.pdf https://archimer.ifremer.fr/doc/00114/22491/20173.pdf doi:10.5194/bg-9-4553-2012 https://archimer.ifremer.fr/doc/00114/22491/ Author(s) 2012. CC Attribution 3.0 License. info:eu-repo/semantics/openAccess restricted use CC-BY Biogeosciences (1726-4170) (Copernicus Gesellschaft Mbh), 2012 , Vol. 9 , N. 11 , P. 4553-4571 text Publication info:eu-repo/semantics/article 2012 ftarchimer https://doi.org/10.5194/bg-9-4553-2012 2021-09-23T20:22:04Z During the MALINA cruise (summer 2009), an extensive effort was undertaken to isolate phytoplankton strains from the northeast (NE) Pacific Ocean, the Bering Strait, the Chukchi Sea, and the Beaufort Sea. In order to characterise the main photosynthetic microorganisms occurring in the Arctic during the summer season, strains were isolated by flow cytometry sorting (FCS) and single cell pipetting before or after phytoplankton enrichment of seawater samples. Strains were isolated both onboard and back in the laboratory and cultured at 4 °C under light/dark conditions. Overall, we isolated and characterised by light microscopy and 18 S rRNA gene sequencing 104 strains of photosynthetic flagellates which grouped into 21 genotypes (defined by 99.5% 18 S rRNA gene sequence similarity), mainly affiliated to Chlorophyta and Heterokontophyta. The taxon most frequently isolated was an Arctic ecotype of the green algal genus Micromonas (Arctic Micromonas), which was nearly the only phytoplankter recovered within the picoplankton (<2 μm) size range. Strains of Arctic Micromonas as well as other strains from the same class (Mamiellophyceae) were identified in further detail by sequencing the internal transcribed spacer (ITS) region of the rRNA operon. The MALINA Micromonas strains share identical 18 S rRNA and ITS sequences suggesting high genetic homogeneity within Arctic Micromonas. Three other Mamiellophyceae strains likely belong to a new genus. Other green algae from the genera Nephroselmis, Chlamydomonas, and Pyramimonas were also isolated, whereas Heterokontophyta included some unidentified Pelagophyceae, Dictyochophyceae (Pedinellales), and Chrysophyceae (Dinobryon faculiferum). Moreover, we isolated some Cryptophyceae (Rhodomonas sp.) as well as a few Prymnesiophyceae and dinoflagellates.We identified the dinoflagellateWoloszynskia cincta by scanning electron microscopy (SEM) and 28 S rRNA gene sequencing. Our morphological analyses show that this species possess the diagnostic features of the genus Biecheleria, and the 28 S rRNA gene topology corroborates this affiliation. We thus propose the transfer of W. cincta to the genus Biecheleria and its recombination as Biecheleria cincta. Article in Journal/Newspaper Arctic Beaufort Sea Bering Strait Chukchi Chukchi Sea Phytoplankton Archimer (Archive Institutionnelle de l'Ifremer - Institut français de recherche pour l'exploitation de la mer) Arctic Bering Strait Chukchi Sea Pacific Biogeosciences 9 11 4553 4571
institution Open Polar
collection Archimer (Archive Institutionnelle de l'Ifremer - Institut français de recherche pour l'exploitation de la mer)
op_collection_id ftarchimer
language English
description During the MALINA cruise (summer 2009), an extensive effort was undertaken to isolate phytoplankton strains from the northeast (NE) Pacific Ocean, the Bering Strait, the Chukchi Sea, and the Beaufort Sea. In order to characterise the main photosynthetic microorganisms occurring in the Arctic during the summer season, strains were isolated by flow cytometry sorting (FCS) and single cell pipetting before or after phytoplankton enrichment of seawater samples. Strains were isolated both onboard and back in the laboratory and cultured at 4 °C under light/dark conditions. Overall, we isolated and characterised by light microscopy and 18 S rRNA gene sequencing 104 strains of photosynthetic flagellates which grouped into 21 genotypes (defined by 99.5% 18 S rRNA gene sequence similarity), mainly affiliated to Chlorophyta and Heterokontophyta. The taxon most frequently isolated was an Arctic ecotype of the green algal genus Micromonas (Arctic Micromonas), which was nearly the only phytoplankter recovered within the picoplankton (<2 μm) size range. Strains of Arctic Micromonas as well as other strains from the same class (Mamiellophyceae) were identified in further detail by sequencing the internal transcribed spacer (ITS) region of the rRNA operon. The MALINA Micromonas strains share identical 18 S rRNA and ITS sequences suggesting high genetic homogeneity within Arctic Micromonas. Three other Mamiellophyceae strains likely belong to a new genus. Other green algae from the genera Nephroselmis, Chlamydomonas, and Pyramimonas were also isolated, whereas Heterokontophyta included some unidentified Pelagophyceae, Dictyochophyceae (Pedinellales), and Chrysophyceae (Dinobryon faculiferum). Moreover, we isolated some Cryptophyceae (Rhodomonas sp.) as well as a few Prymnesiophyceae and dinoflagellates.We identified the dinoflagellateWoloszynskia cincta by scanning electron microscopy (SEM) and 28 S rRNA gene sequencing. Our morphological analyses show that this species possess the diagnostic features of the genus Biecheleria, and the 28 S rRNA gene topology corroborates this affiliation. We thus propose the transfer of W. cincta to the genus Biecheleria and its recombination as Biecheleria cincta.
format Article in Journal/Newspaper
author Balzano, S.
Gourvil, P.
Siano, Raffaele
Chanoine, M.
Marie, D.
Lessard, S.
Sarno, D.
Vaulot, Daniel
spellingShingle Balzano, S.
Gourvil, P.
Siano, Raffaele
Chanoine, M.
Marie, D.
Lessard, S.
Sarno, D.
Vaulot, Daniel
Diversity of cultured photosynthetic flagellates in the northeast Pacific and Arctic Oceans in summer
author_facet Balzano, S.
Gourvil, P.
Siano, Raffaele
Chanoine, M.
Marie, D.
Lessard, S.
Sarno, D.
Vaulot, Daniel
author_sort Balzano, S.
title Diversity of cultured photosynthetic flagellates in the northeast Pacific and Arctic Oceans in summer
title_short Diversity of cultured photosynthetic flagellates in the northeast Pacific and Arctic Oceans in summer
title_full Diversity of cultured photosynthetic flagellates in the northeast Pacific and Arctic Oceans in summer
title_fullStr Diversity of cultured photosynthetic flagellates in the northeast Pacific and Arctic Oceans in summer
title_full_unstemmed Diversity of cultured photosynthetic flagellates in the northeast Pacific and Arctic Oceans in summer
title_sort diversity of cultured photosynthetic flagellates in the northeast pacific and arctic oceans in summer
publisher Copernicus Gesellschaft Mbh
publishDate 2012
url https://archimer.ifremer.fr/doc/00114/22491/20172.pdf
https://archimer.ifremer.fr/doc/00114/22491/20173.pdf
https://doi.org/10.5194/bg-9-4553-2012
https://archimer.ifremer.fr/doc/00114/22491/
geographic Arctic
Bering Strait
Chukchi Sea
Pacific
geographic_facet Arctic
Bering Strait
Chukchi Sea
Pacific
genre Arctic
Beaufort Sea
Bering Strait
Chukchi
Chukchi Sea
Phytoplankton
genre_facet Arctic
Beaufort Sea
Bering Strait
Chukchi
Chukchi Sea
Phytoplankton
op_source Biogeosciences (1726-4170) (Copernicus Gesellschaft Mbh), 2012 , Vol. 9 , N. 11 , P. 4553-4571
op_relation https://archimer.ifremer.fr/doc/00114/22491/20172.pdf
https://archimer.ifremer.fr/doc/00114/22491/20173.pdf
doi:10.5194/bg-9-4553-2012
https://archimer.ifremer.fr/doc/00114/22491/
op_rights Author(s) 2012. CC Attribution 3.0 License.
info:eu-repo/semantics/openAccess
restricted use
op_rightsnorm CC-BY
op_doi https://doi.org/10.5194/bg-9-4553-2012
container_title Biogeosciences
container_volume 9
container_issue 11
container_start_page 4553
op_container_end_page 4571
_version_ 1766317374087102464