Diversity and functional specialization of oyster immune cells uncovered by integrative single cell level investigations
Mollusks are a major component of animal biodiversity and play a critical role in ecosystems and global food security. The Pacific oyster,Crassostrea (Magallana) gigas, is the most farmed bivalve mollusk in the world and is becoming a model species for invertebrate biology. Despite the extensive res...
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Cold Spring Harbor Laboratory
2024
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ftarchimer:oai:archimer.ifremer.fr:101808 2024-10-06T13:51:59+00:00 Diversity and functional specialization of oyster immune cells uncovered by integrative single cell level investigations De La Forest Divonne, Sebastien Pouzadoux, Juliette Romatif, Oceane Montagnani, Caroline Mitta, Guillaume Destoumieux Garzon, Delphine Gourbal, Benjamin Charrière, Guillaume M. Vignal, Emmanuel 2024-07-23 application/pdf https://archimer.ifremer.fr/doc/00906/101808/112833.pdf https://archimer.ifremer.fr/doc/00906/101808/112834.csv https://archimer.ifremer.fr/doc/00906/101808/112835.gz https://archimer.ifremer.fr/doc/00906/101808/112836.csv https://doi.org/10.1101/2024.07.19.604245 https://archimer.ifremer.fr/doc/00906/101808/ eng eng Cold Spring Harbor Laboratory https://archimer.ifremer.fr/doc/00906/101808/112833.pdf https://archimer.ifremer.fr/doc/00906/101808/112834.csv https://archimer.ifremer.fr/doc/00906/101808/112835.gz https://archimer.ifremer.fr/doc/00906/101808/112836.csv doi:10.1101/2024.07.19.604245 https://archimer.ifremer.fr/doc/00906/101808/ info:eu-repo/semantics/openAccess restricted use bioRxiv (Cold Spring Harbor Laboratory) In Press text Article info:eu-repo/semantics/article 2024 ftarchimer https://doi.org/10.1101/2024.07.19.604245 2024-09-11T00:12:19Z Mollusks are a major component of animal biodiversity and play a critical role in ecosystems and global food security. The Pacific oyster,Crassostrea (Magallana) gigas, is the most farmed bivalve mollusk in the world and is becoming a model species for invertebrate biology. Despite the extensive research on hemocytes, the immune cells of bivalves, their characterization remains elusive. Here we were able to extensively characterize the diverse hemocytes and identified at least seven functionally distinct cell types and three hematopoietic lineages. A combination of single-cell RNA sequencing, quantitative cytology, cell sorting, functional assays and pseudo-time analyses was used to deliver a comprehensive view of the distinct hemocyte types. This integrative analysis enabled us to reconcile molecular and cellular data and identify distinct cell types performing specialized immune functions, such as phagocytosis, reactive oxygen species production, copper accumulation, and expression of antimicrobial peptides. This study emphasized the need for more in depth studies of cellular immunity in mollusks and non-model invertebrates and set the ground for further comparative immunology studies at the cellular level. Article in Journal/Newspaper Pacific oyster Archimer (Archive Institutionnelle de l'Ifremer - Institut français de recherche pour l'exploitation de la mer) Pacific |
institution |
Open Polar |
collection |
Archimer (Archive Institutionnelle de l'Ifremer - Institut français de recherche pour l'exploitation de la mer) |
op_collection_id |
ftarchimer |
language |
English |
description |
Mollusks are a major component of animal biodiversity and play a critical role in ecosystems and global food security. The Pacific oyster,Crassostrea (Magallana) gigas, is the most farmed bivalve mollusk in the world and is becoming a model species for invertebrate biology. Despite the extensive research on hemocytes, the immune cells of bivalves, their characterization remains elusive. Here we were able to extensively characterize the diverse hemocytes and identified at least seven functionally distinct cell types and three hematopoietic lineages. A combination of single-cell RNA sequencing, quantitative cytology, cell sorting, functional assays and pseudo-time analyses was used to deliver a comprehensive view of the distinct hemocyte types. This integrative analysis enabled us to reconcile molecular and cellular data and identify distinct cell types performing specialized immune functions, such as phagocytosis, reactive oxygen species production, copper accumulation, and expression of antimicrobial peptides. This study emphasized the need for more in depth studies of cellular immunity in mollusks and non-model invertebrates and set the ground for further comparative immunology studies at the cellular level. |
format |
Article in Journal/Newspaper |
author |
De La Forest Divonne, Sebastien Pouzadoux, Juliette Romatif, Oceane Montagnani, Caroline Mitta, Guillaume Destoumieux Garzon, Delphine Gourbal, Benjamin Charrière, Guillaume M. Vignal, Emmanuel |
spellingShingle |
De La Forest Divonne, Sebastien Pouzadoux, Juliette Romatif, Oceane Montagnani, Caroline Mitta, Guillaume Destoumieux Garzon, Delphine Gourbal, Benjamin Charrière, Guillaume M. Vignal, Emmanuel Diversity and functional specialization of oyster immune cells uncovered by integrative single cell level investigations |
author_facet |
De La Forest Divonne, Sebastien Pouzadoux, Juliette Romatif, Oceane Montagnani, Caroline Mitta, Guillaume Destoumieux Garzon, Delphine Gourbal, Benjamin Charrière, Guillaume M. Vignal, Emmanuel |
author_sort |
De La Forest Divonne, Sebastien |
title |
Diversity and functional specialization of oyster immune cells uncovered by integrative single cell level investigations |
title_short |
Diversity and functional specialization of oyster immune cells uncovered by integrative single cell level investigations |
title_full |
Diversity and functional specialization of oyster immune cells uncovered by integrative single cell level investigations |
title_fullStr |
Diversity and functional specialization of oyster immune cells uncovered by integrative single cell level investigations |
title_full_unstemmed |
Diversity and functional specialization of oyster immune cells uncovered by integrative single cell level investigations |
title_sort |
diversity and functional specialization of oyster immune cells uncovered by integrative single cell level investigations |
publisher |
Cold Spring Harbor Laboratory |
publishDate |
2024 |
url |
https://archimer.ifremer.fr/doc/00906/101808/112833.pdf https://archimer.ifremer.fr/doc/00906/101808/112834.csv https://archimer.ifremer.fr/doc/00906/101808/112835.gz https://archimer.ifremer.fr/doc/00906/101808/112836.csv https://doi.org/10.1101/2024.07.19.604245 https://archimer.ifremer.fr/doc/00906/101808/ |
geographic |
Pacific |
geographic_facet |
Pacific |
genre |
Pacific oyster |
genre_facet |
Pacific oyster |
op_source |
bioRxiv (Cold Spring Harbor Laboratory) In Press |
op_relation |
https://archimer.ifremer.fr/doc/00906/101808/112833.pdf https://archimer.ifremer.fr/doc/00906/101808/112834.csv https://archimer.ifremer.fr/doc/00906/101808/112835.gz https://archimer.ifremer.fr/doc/00906/101808/112836.csv doi:10.1101/2024.07.19.604245 https://archimer.ifremer.fr/doc/00906/101808/ |
op_rights |
info:eu-repo/semantics/openAccess restricted use |
op_doi |
https://doi.org/10.1101/2024.07.19.604245 |
_version_ |
1812180302244610048 |