Comparison of Three Algorithms to Estimate Tree Stem Diameter from Terrestrial Laser Scanner Data

International audience Terrestrial laser scanners provide accurate and detailed point clouds of forest plots, which can be used as an alternative to destructive measurements during forest inventories. Various specialized algorithms have been developed to provide automatic and objective estimates of...

Full description

Bibliographic Details
Published in:Forests
Main Authors: Ravaglia, Joris, Fournier, Richard, A, Bac, Alexandra, Véga, Cédric, Côté, Jean-François, Piboule, Alexandre, Rémillard, Ulysse
Other Authors: Aix Marseille Université (AMU), Université de Sherbrooke (UdeS), Laboratoire d’Inventaire Forestier (LIF), École nationale des sciences géographiques (ENSG), Institut National de l'Information Géographique et Forestière IGN (IGN)-Institut National de l'Information Géographique et Forestière IGN (IGN), Canadian Forest Service - CFS (CANADA), Office national des forêts (ONF), ANR-11-LABX-0002,ARBRE,Recherches Avancées sur l'Arbre et les Ecosytèmes Forestiers(2011)
Format: Article in Journal/Newspaper
Language:English
Published: HAL CCSD 2019
Subjects:
Online Access:https://hal.science/hal-03325416
https://hal.science/hal-03325416/document
https://hal.science/hal-03325416/file/forests-10-00599-v2.pdf
https://doi.org/10.3390/f10070599
id ftanrparis:oai:HAL:hal-03325416v1
record_format openpolar
spelling ftanrparis:oai:HAL:hal-03325416v1 2024-06-16T07:41:35+00:00 Comparison of Three Algorithms to Estimate Tree Stem Diameter from Terrestrial Laser Scanner Data Ravaglia, Joris Fournier, Richard, A Bac, Alexandra Véga, Cédric Côté, Jean-François Piboule, Alexandre Rémillard, Ulysse Aix Marseille Université (AMU) Université de Sherbrooke (UdeS) Laboratoire d’Inventaire Forestier (LIF) École nationale des sciences géographiques (ENSG) Institut National de l'Information Géographique et Forestière IGN (IGN)-Institut National de l'Information Géographique et Forestière IGN (IGN) Canadian Forest Service - CFS (CANADA) Office national des forêts (ONF) ANR-11-LABX-0002,ARBRE,Recherches Avancées sur l'Arbre et les Ecosytèmes Forestiers(2011) 2019-07 https://hal.science/hal-03325416 https://hal.science/hal-03325416/document https://hal.science/hal-03325416/file/forests-10-00599-v2.pdf https://doi.org/10.3390/f10070599 en eng HAL CCSD MDPI info:eu-repo/semantics/altIdentifier/doi/10.3390/f10070599 hal-03325416 https://hal.science/hal-03325416 https://hal.science/hal-03325416/document https://hal.science/hal-03325416/file/forests-10-00599-v2.pdf doi:10.3390/f10070599 http://creativecommons.org/licenses/by/ info:eu-repo/semantics/OpenAccess ISSN: 1999-4907 Forests https://hal.science/hal-03325416 Forests, 2019, 10 (7), pp.599. ⟨10.3390/f10070599⟩ forest inventory stem diameter diameter at breast height (DBH) terrestrial laser scanner STEP algorithm CompuTree SimpleTree LiDAR [SDV.EE]Life Sciences [q-bio]/Ecology environment info:eu-repo/semantics/article Journal articles 2019 ftanrparis https://doi.org/10.3390/f10070599 2024-05-22T23:47:04Z International audience Terrestrial laser scanners provide accurate and detailed point clouds of forest plots, which can be used as an alternative to destructive measurements during forest inventories. Various specialized algorithms have been developed to provide automatic and objective estimates of forest attributes from point clouds. The STEP (Snakes for Tuboid Extraction from Point cloud) algorithm was developed to estimate both stem diameter at breast height and stem diameters along the bole length. Here, we evaluate the accuracy of this algorithm and compare its performance with two other state-of-the-art algorithms that were designed for the same purpose (i.e., the CompuTree and SimpleTree algorithms). We tested each algorithm against point clouds that incorporated various degrees of noise and occlusion. We applied these algorithms to three contrasting test sites: (1) simulated scenes of coniferous stands in Newfoundland (Canada), (2) test sites of deciduous stands in Phalsbourg (France), and (3) coniferous plantations in Quebec, Canada. In most cases, the STEP algorithm predicted diameter at breast height with higher R2 and lower RMSE than the other two algorithms. The STEP algorithm also achieved greater accuracy when estimating stem diameter in occluded and noisy point clouds, with mean errors in the range of 1.1 cm to 2.28 cm. The CompuTree and SimpleTree algorithms respectively produced errors in the range of 2.62 cm to 6.1 cm and 1.03 cm to 3.34 cm, respectively. Unlike CompuTree or SimpleTree, the STEP algorithm was not able to estimate trunk diameter in the uppermost portions of the trees. Our results show that the STEP algorithm is more adapted to extract DBH and stem diameter automatically from occluded and noisy point clouds. Our study also highlights that SimpleTree and CompuTree require data filtering and results corrections. Conversely, none of these procedures were applied for the implementation of the STEP algorithm. Article in Journal/Newspaper Newfoundland Portail HAL-ANR (Agence Nationale de la Recherche) Canada Forests 10 7 599
institution Open Polar
collection Portail HAL-ANR (Agence Nationale de la Recherche)
op_collection_id ftanrparis
language English
topic forest inventory
stem diameter
diameter at breast height (DBH)
terrestrial laser scanner
STEP algorithm
CompuTree
SimpleTree
LiDAR
[SDV.EE]Life Sciences [q-bio]/Ecology
environment
spellingShingle forest inventory
stem diameter
diameter at breast height (DBH)
terrestrial laser scanner
STEP algorithm
CompuTree
SimpleTree
LiDAR
[SDV.EE]Life Sciences [q-bio]/Ecology
environment
Ravaglia, Joris
Fournier, Richard, A
Bac, Alexandra
Véga, Cédric
Côté, Jean-François
Piboule, Alexandre
Rémillard, Ulysse
Comparison of Three Algorithms to Estimate Tree Stem Diameter from Terrestrial Laser Scanner Data
topic_facet forest inventory
stem diameter
diameter at breast height (DBH)
terrestrial laser scanner
STEP algorithm
CompuTree
SimpleTree
LiDAR
[SDV.EE]Life Sciences [q-bio]/Ecology
environment
description International audience Terrestrial laser scanners provide accurate and detailed point clouds of forest plots, which can be used as an alternative to destructive measurements during forest inventories. Various specialized algorithms have been developed to provide automatic and objective estimates of forest attributes from point clouds. The STEP (Snakes for Tuboid Extraction from Point cloud) algorithm was developed to estimate both stem diameter at breast height and stem diameters along the bole length. Here, we evaluate the accuracy of this algorithm and compare its performance with two other state-of-the-art algorithms that were designed for the same purpose (i.e., the CompuTree and SimpleTree algorithms). We tested each algorithm against point clouds that incorporated various degrees of noise and occlusion. We applied these algorithms to three contrasting test sites: (1) simulated scenes of coniferous stands in Newfoundland (Canada), (2) test sites of deciduous stands in Phalsbourg (France), and (3) coniferous plantations in Quebec, Canada. In most cases, the STEP algorithm predicted diameter at breast height with higher R2 and lower RMSE than the other two algorithms. The STEP algorithm also achieved greater accuracy when estimating stem diameter in occluded and noisy point clouds, with mean errors in the range of 1.1 cm to 2.28 cm. The CompuTree and SimpleTree algorithms respectively produced errors in the range of 2.62 cm to 6.1 cm and 1.03 cm to 3.34 cm, respectively. Unlike CompuTree or SimpleTree, the STEP algorithm was not able to estimate trunk diameter in the uppermost portions of the trees. Our results show that the STEP algorithm is more adapted to extract DBH and stem diameter automatically from occluded and noisy point clouds. Our study also highlights that SimpleTree and CompuTree require data filtering and results corrections. Conversely, none of these procedures were applied for the implementation of the STEP algorithm.
author2 Aix Marseille Université (AMU)
Université de Sherbrooke (UdeS)
Laboratoire d’Inventaire Forestier (LIF)
École nationale des sciences géographiques (ENSG)
Institut National de l'Information Géographique et Forestière IGN (IGN)-Institut National de l'Information Géographique et Forestière IGN (IGN)
Canadian Forest Service - CFS (CANADA)
Office national des forêts (ONF)
ANR-11-LABX-0002,ARBRE,Recherches Avancées sur l'Arbre et les Ecosytèmes Forestiers(2011)
format Article in Journal/Newspaper
author Ravaglia, Joris
Fournier, Richard, A
Bac, Alexandra
Véga, Cédric
Côté, Jean-François
Piboule, Alexandre
Rémillard, Ulysse
author_facet Ravaglia, Joris
Fournier, Richard, A
Bac, Alexandra
Véga, Cédric
Côté, Jean-François
Piboule, Alexandre
Rémillard, Ulysse
author_sort Ravaglia, Joris
title Comparison of Three Algorithms to Estimate Tree Stem Diameter from Terrestrial Laser Scanner Data
title_short Comparison of Three Algorithms to Estimate Tree Stem Diameter from Terrestrial Laser Scanner Data
title_full Comparison of Three Algorithms to Estimate Tree Stem Diameter from Terrestrial Laser Scanner Data
title_fullStr Comparison of Three Algorithms to Estimate Tree Stem Diameter from Terrestrial Laser Scanner Data
title_full_unstemmed Comparison of Three Algorithms to Estimate Tree Stem Diameter from Terrestrial Laser Scanner Data
title_sort comparison of three algorithms to estimate tree stem diameter from terrestrial laser scanner data
publisher HAL CCSD
publishDate 2019
url https://hal.science/hal-03325416
https://hal.science/hal-03325416/document
https://hal.science/hal-03325416/file/forests-10-00599-v2.pdf
https://doi.org/10.3390/f10070599
geographic Canada
geographic_facet Canada
genre Newfoundland
genre_facet Newfoundland
op_source ISSN: 1999-4907
Forests
https://hal.science/hal-03325416
Forests, 2019, 10 (7), pp.599. ⟨10.3390/f10070599⟩
op_relation info:eu-repo/semantics/altIdentifier/doi/10.3390/f10070599
hal-03325416
https://hal.science/hal-03325416
https://hal.science/hal-03325416/document
https://hal.science/hal-03325416/file/forests-10-00599-v2.pdf
doi:10.3390/f10070599
op_rights http://creativecommons.org/licenses/by/
info:eu-repo/semantics/OpenAccess
op_doi https://doi.org/10.3390/f10070599
container_title Forests
container_volume 10
container_issue 7
container_start_page 599
_version_ 1802008823746002944