From high‑resolution to low‑resolution dive datasets: a new index to quantify the foraging effort of marine predators

International audience BackgroundIn the last decade, thousands of satellite-relayed data loggers (SRDLs) have been deployed, providing large datasets on marine predator movement patterns at sea and their diving behaviour. However, the latter is in a highly summarised, low-resolution form, from which...

Full description

Bibliographic Details
Published in:Animal Biotelemetry
Main Authors: Heerah, Karine, Hindell, Mark A., Guinet, Christophe, Charrassin, Jean-Benoit
Other Authors: Processus de couplage à Petite Echelle, Ecosystèmes et Prédateurs Supérieurs (PEPS), Laboratoire d'Océanographie et du Climat : Expérimentations et Approches Numériques (LOCEAN), Muséum national d'Histoire naturelle (MNHN)-Institut de Recherche pour le Développement (IRD)-Université Pierre et Marie Curie - Paris 6 (UPMC)-Institut national des sciences de l'Univers (INSU - CNRS)-Centre National de la Recherche Scientifique (CNRS)-Institut Pierre-Simon-Laplace (IPSL (FR_636)), École normale supérieure - Paris (ENS-PSL), Université Paris Sciences et Lettres (PSL)-Université Paris Sciences et Lettres (PSL)-Université de Versailles Saint-Quentin-en-Yvelines (UVSQ)-Commissariat à l'énergie atomique et aux énergies alternatives (CEA)-Institut national des sciences de l'Univers (INSU - CNRS)-Université Paris Diderot - Paris 7 (UPD7)-École polytechnique (X)-Centre National d'Études Spatiales Toulouse (CNES)-Sorbonne Université (SU)-Centre National de la Recherche Scientifique (CNRS)-École normale supérieure - Paris (ENS-PSL), Université Paris Sciences et Lettres (PSL)-Université Paris Sciences et Lettres (PSL)-Université de Versailles Saint-Quentin-en-Yvelines (UVSQ)-Commissariat à l'énergie atomique et aux énergies alternatives (CEA)-Université Paris Diderot - Paris 7 (UPD7)-École polytechnique (X)-Centre National d'Études Spatiales Toulouse (CNES)-Sorbonne Université (SU)-Centre National de la Recherche Scientifique (CNRS)-Muséum national d'Histoire naturelle (MNHN)-Institut de Recherche pour le Développement (IRD)-Université Pierre et Marie Curie - Paris 6 (UPMC)-Institut national des sciences de l'Univers (INSU - CNRS)-Centre National de la Recherche Scientifique (CNRS)-Institut Pierre-Simon-Laplace (IPSL (FR_636)), Université Paris Sciences et Lettres (PSL)-Université Paris Sciences et Lettres (PSL)-Université de Versailles Saint-Quentin-en-Yvelines (UVSQ)-Commissariat à l'énergie atomique et aux énergies alternatives (CEA)-Université Paris Diderot - Paris 7 (UPD7)-École polytechnique (X)-Centre National d'Études Spatiales Toulouse (CNES)-Sorbonne Université (SU)-Centre National de la Recherche Scientifique (CNRS), Institute for Marine and Antarctic Studies Hobart (IMAS), University of Tasmania Hobart, Australia (UTAS), Antarctic Climate & Ecosystem Cooperative Research Centre, Centre d'Études Biologiques de Chizé - UMR 7372 (CEBC), Institut National de la Recherche Agronomique (INRA)-La Rochelle Université (ULR)-Centre National de la Recherche Scientifique (CNRS), ANR-07-VULN-0005,IPSOS-SEAL,Investigation of the vulnerability of the productivity of the Southern Ocean Subsystems to climate change: the Southern Elephant seal assessment from mid to high latitudes(2007)
Format: Article in Journal/Newspaper
Language:English
Published: HAL CCSD 2015
Subjects:
Online Access:https://hal.science/hal-01328655
https://hal.science/hal-01328655/document
https://hal.science/hal-01328655/file/art_10.1186_s40317-015-0074-3.pdf
https://doi.org/10.1186/s40317-015-0074-3
id ftanrparis:oai:HAL:hal-01328655v1
record_format openpolar
institution Open Polar
collection Portail HAL-ANR (Agence Nationale de la Recherche)
op_collection_id ftanrparis
language English
topic Accelerometers
Foraging behaviour
Marine ecology
Dive profile
Pinnipeds
Method
Satellite-linked time depth recorders
Argos tags
[SDE]Environmental Sciences
spellingShingle Accelerometers
Foraging behaviour
Marine ecology
Dive profile
Pinnipeds
Method
Satellite-linked time depth recorders
Argos tags
[SDE]Environmental Sciences
Heerah, Karine
Hindell, Mark A.
Guinet, Christophe
Charrassin, Jean-Benoit
From high‑resolution to low‑resolution dive datasets: a new index to quantify the foraging effort of marine predators
topic_facet Accelerometers
Foraging behaviour
Marine ecology
Dive profile
Pinnipeds
Method
Satellite-linked time depth recorders
Argos tags
[SDE]Environmental Sciences
description International audience BackgroundIn the last decade, thousands of satellite-relayed data loggers (SRDLs) have been deployed, providing large datasets on marine predator movement patterns at sea and their diving behaviour. However, the latter is in a highly summarised, low-resolution form, from which it is difficult to make the sorts of important behavioural inferences that are possible from higher-resolution datasets (such as detection of likely foraging events). The main objective of this study was to develop a simple, but accurate tool to detect and quantify within-dive foraging periods in low-resolution dives.MethodTwo southern elephant seals were fitted with a head-mounted time depth recorder (TDR) (recording depth at 1 Hz) and an accelerometer (recording 3 axes of acceleration at 16 Hz) from which prey capture attempts were estimated (PrCA), and a Weddell seal was also fitted with a TDR (1 Hz).The resulting high-resolution dive profiles were used to: (1) calculate an accurate index of foraging effort based on the detection of vertical sinuosity switches (i.e. hunting highres time); (2) produce an SRDL-equivalent low-resolution dataset using a broken stick algorithm; and (3) from each low-resolution dive calculate a set of candidate foraging effort indices.ResultsHunting lowres time, which is the total time spent in decreased vertical velocity segments of the dive, was the foraging effort index that best correlated with hunting highres time. Hunting highres mode of SES dives (highly sinuous parts of high-resolution dives) was associated with 77 % of total PrCA. In comparison, Hunting lowres segments of SES dives were associated with 68 % of PrCA as well as with four times more PrCA than transit lowres segments.ConclusionWe found a low-resolution index which indicates foraging activity within a highly summarised dive profile and which identified most PrCA, despite degraded information transmitted by SLDRs. Used in combination with other measurements of the in situ environment, the hunting lowres index could ...
author2 Processus de couplage à Petite Echelle, Ecosystèmes et Prédateurs Supérieurs (PEPS)
Laboratoire d'Océanographie et du Climat : Expérimentations et Approches Numériques (LOCEAN)
Muséum national d'Histoire naturelle (MNHN)-Institut de Recherche pour le Développement (IRD)-Université Pierre et Marie Curie - Paris 6 (UPMC)-Institut national des sciences de l'Univers (INSU - CNRS)-Centre National de la Recherche Scientifique (CNRS)-Institut Pierre-Simon-Laplace (IPSL (FR_636))
École normale supérieure - Paris (ENS-PSL)
Université Paris Sciences et Lettres (PSL)-Université Paris Sciences et Lettres (PSL)-Université de Versailles Saint-Quentin-en-Yvelines (UVSQ)-Commissariat à l'énergie atomique et aux énergies alternatives (CEA)-Institut national des sciences de l'Univers (INSU - CNRS)-Université Paris Diderot - Paris 7 (UPD7)-École polytechnique (X)-Centre National d'Études Spatiales Toulouse (CNES)-Sorbonne Université (SU)-Centre National de la Recherche Scientifique (CNRS)-École normale supérieure - Paris (ENS-PSL)
Université Paris Sciences et Lettres (PSL)-Université Paris Sciences et Lettres (PSL)-Université de Versailles Saint-Quentin-en-Yvelines (UVSQ)-Commissariat à l'énergie atomique et aux énergies alternatives (CEA)-Université Paris Diderot - Paris 7 (UPD7)-École polytechnique (X)-Centre National d'Études Spatiales Toulouse (CNES)-Sorbonne Université (SU)-Centre National de la Recherche Scientifique (CNRS)-Muséum national d'Histoire naturelle (MNHN)-Institut de Recherche pour le Développement (IRD)-Université Pierre et Marie Curie - Paris 6 (UPMC)-Institut national des sciences de l'Univers (INSU - CNRS)-Centre National de la Recherche Scientifique (CNRS)-Institut Pierre-Simon-Laplace (IPSL (FR_636))
Université Paris Sciences et Lettres (PSL)-Université Paris Sciences et Lettres (PSL)-Université de Versailles Saint-Quentin-en-Yvelines (UVSQ)-Commissariat à l'énergie atomique et aux énergies alternatives (CEA)-Université Paris Diderot - Paris 7 (UPD7)-École polytechnique (X)-Centre National d'Études Spatiales Toulouse (CNES)-Sorbonne Université (SU)-Centre National de la Recherche Scientifique (CNRS)
Institute for Marine and Antarctic Studies Hobart (IMAS)
University of Tasmania Hobart, Australia (UTAS)
Antarctic Climate & Ecosystem Cooperative Research Centre
Centre d'Études Biologiques de Chizé - UMR 7372 (CEBC)
Institut National de la Recherche Agronomique (INRA)-La Rochelle Université (ULR)-Centre National de la Recherche Scientifique (CNRS)
ANR-07-VULN-0005,IPSOS-SEAL,Investigation of the vulnerability of the productivity of the Southern Ocean Subsystems to climate change: the Southern Elephant seal assessment from mid to high latitudes(2007)
format Article in Journal/Newspaper
author Heerah, Karine
Hindell, Mark A.
Guinet, Christophe
Charrassin, Jean-Benoit
author_facet Heerah, Karine
Hindell, Mark A.
Guinet, Christophe
Charrassin, Jean-Benoit
author_sort Heerah, Karine
title From high‑resolution to low‑resolution dive datasets: a new index to quantify the foraging effort of marine predators
title_short From high‑resolution to low‑resolution dive datasets: a new index to quantify the foraging effort of marine predators
title_full From high‑resolution to low‑resolution dive datasets: a new index to quantify the foraging effort of marine predators
title_fullStr From high‑resolution to low‑resolution dive datasets: a new index to quantify the foraging effort of marine predators
title_full_unstemmed From high‑resolution to low‑resolution dive datasets: a new index to quantify the foraging effort of marine predators
title_sort from high‑resolution to low‑resolution dive datasets: a new index to quantify the foraging effort of marine predators
publisher HAL CCSD
publishDate 2015
url https://hal.science/hal-01328655
https://hal.science/hal-01328655/document
https://hal.science/hal-01328655/file/art_10.1186_s40317-015-0074-3.pdf
https://doi.org/10.1186/s40317-015-0074-3
genre Elephant Seals
Southern Elephant Seals
Weddell Seal
genre_facet Elephant Seals
Southern Elephant Seals
Weddell Seal
op_source ISSN: 2050-3385
Animal Biotelemetry
https://hal.science/hal-01328655
Animal Biotelemetry, 2015, 3, pp.42. ⟨10.1186/s40317-015-0074-3⟩
http://animalbiotelemetry.biomedcentral.com/articles/10.1186/s40317-015-0074-3
op_relation info:eu-repo/semantics/altIdentifier/doi/10.1186/s40317-015-0074-3
hal-01328655
https://hal.science/hal-01328655
https://hal.science/hal-01328655/document
https://hal.science/hal-01328655/file/art_10.1186_s40317-015-0074-3.pdf
doi:10.1186/s40317-015-0074-3
op_rights http://creativecommons.org/licenses/by/
info:eu-repo/semantics/OpenAccess
op_doi https://doi.org/10.1186/s40317-015-0074-3
container_title Animal Biotelemetry
container_volume 3
container_issue 1
_version_ 1799479325602349056
spelling ftanrparis:oai:HAL:hal-01328655v1 2024-05-19T07:39:45+00:00 From high‑resolution to low‑resolution dive datasets: a new index to quantify the foraging effort of marine predators Heerah, Karine Hindell, Mark A. Guinet, Christophe Charrassin, Jean-Benoit Processus de couplage à Petite Echelle, Ecosystèmes et Prédateurs Supérieurs (PEPS) Laboratoire d'Océanographie et du Climat : Expérimentations et Approches Numériques (LOCEAN) Muséum national d'Histoire naturelle (MNHN)-Institut de Recherche pour le Développement (IRD)-Université Pierre et Marie Curie - Paris 6 (UPMC)-Institut national des sciences de l'Univers (INSU - CNRS)-Centre National de la Recherche Scientifique (CNRS)-Institut Pierre-Simon-Laplace (IPSL (FR_636)) École normale supérieure - Paris (ENS-PSL) Université Paris Sciences et Lettres (PSL)-Université Paris Sciences et Lettres (PSL)-Université de Versailles Saint-Quentin-en-Yvelines (UVSQ)-Commissariat à l'énergie atomique et aux énergies alternatives (CEA)-Institut national des sciences de l'Univers (INSU - CNRS)-Université Paris Diderot - Paris 7 (UPD7)-École polytechnique (X)-Centre National d'Études Spatiales Toulouse (CNES)-Sorbonne Université (SU)-Centre National de la Recherche Scientifique (CNRS)-École normale supérieure - Paris (ENS-PSL) Université Paris Sciences et Lettres (PSL)-Université Paris Sciences et Lettres (PSL)-Université de Versailles Saint-Quentin-en-Yvelines (UVSQ)-Commissariat à l'énergie atomique et aux énergies alternatives (CEA)-Université Paris Diderot - Paris 7 (UPD7)-École polytechnique (X)-Centre National d'Études Spatiales Toulouse (CNES)-Sorbonne Université (SU)-Centre National de la Recherche Scientifique (CNRS)-Muséum national d'Histoire naturelle (MNHN)-Institut de Recherche pour le Développement (IRD)-Université Pierre et Marie Curie - Paris 6 (UPMC)-Institut national des sciences de l'Univers (INSU - CNRS)-Centre National de la Recherche Scientifique (CNRS)-Institut Pierre-Simon-Laplace (IPSL (FR_636)) Université Paris Sciences et Lettres (PSL)-Université Paris Sciences et Lettres (PSL)-Université de Versailles Saint-Quentin-en-Yvelines (UVSQ)-Commissariat à l'énergie atomique et aux énergies alternatives (CEA)-Université Paris Diderot - Paris 7 (UPD7)-École polytechnique (X)-Centre National d'Études Spatiales Toulouse (CNES)-Sorbonne Université (SU)-Centre National de la Recherche Scientifique (CNRS) Institute for Marine and Antarctic Studies Hobart (IMAS) University of Tasmania Hobart, Australia (UTAS) Antarctic Climate & Ecosystem Cooperative Research Centre Centre d'Études Biologiques de Chizé - UMR 7372 (CEBC) Institut National de la Recherche Agronomique (INRA)-La Rochelle Université (ULR)-Centre National de la Recherche Scientifique (CNRS) ANR-07-VULN-0005,IPSOS-SEAL,Investigation of the vulnerability of the productivity of the Southern Ocean Subsystems to climate change: the Southern Elephant seal assessment from mid to high latitudes(2007) 2015 https://hal.science/hal-01328655 https://hal.science/hal-01328655/document https://hal.science/hal-01328655/file/art_10.1186_s40317-015-0074-3.pdf https://doi.org/10.1186/s40317-015-0074-3 en eng HAL CCSD BioMed Central info:eu-repo/semantics/altIdentifier/doi/10.1186/s40317-015-0074-3 hal-01328655 https://hal.science/hal-01328655 https://hal.science/hal-01328655/document https://hal.science/hal-01328655/file/art_10.1186_s40317-015-0074-3.pdf doi:10.1186/s40317-015-0074-3 http://creativecommons.org/licenses/by/ info:eu-repo/semantics/OpenAccess ISSN: 2050-3385 Animal Biotelemetry https://hal.science/hal-01328655 Animal Biotelemetry, 2015, 3, pp.42. ⟨10.1186/s40317-015-0074-3⟩ http://animalbiotelemetry.biomedcentral.com/articles/10.1186/s40317-015-0074-3 Accelerometers Foraging behaviour Marine ecology Dive profile Pinnipeds Method Satellite-linked time depth recorders Argos tags [SDE]Environmental Sciences info:eu-repo/semantics/article Journal articles 2015 ftanrparis https://doi.org/10.1186/s40317-015-0074-3 2024-04-23T03:21:32Z International audience BackgroundIn the last decade, thousands of satellite-relayed data loggers (SRDLs) have been deployed, providing large datasets on marine predator movement patterns at sea and their diving behaviour. However, the latter is in a highly summarised, low-resolution form, from which it is difficult to make the sorts of important behavioural inferences that are possible from higher-resolution datasets (such as detection of likely foraging events). The main objective of this study was to develop a simple, but accurate tool to detect and quantify within-dive foraging periods in low-resolution dives.MethodTwo southern elephant seals were fitted with a head-mounted time depth recorder (TDR) (recording depth at 1 Hz) and an accelerometer (recording 3 axes of acceleration at 16 Hz) from which prey capture attempts were estimated (PrCA), and a Weddell seal was also fitted with a TDR (1 Hz).The resulting high-resolution dive profiles were used to: (1) calculate an accurate index of foraging effort based on the detection of vertical sinuosity switches (i.e. hunting highres time); (2) produce an SRDL-equivalent low-resolution dataset using a broken stick algorithm; and (3) from each low-resolution dive calculate a set of candidate foraging effort indices.ResultsHunting lowres time, which is the total time spent in decreased vertical velocity segments of the dive, was the foraging effort index that best correlated with hunting highres time. Hunting highres mode of SES dives (highly sinuous parts of high-resolution dives) was associated with 77 % of total PrCA. In comparison, Hunting lowres segments of SES dives were associated with 68 % of PrCA as well as with four times more PrCA than transit lowres segments.ConclusionWe found a low-resolution index which indicates foraging activity within a highly summarised dive profile and which identified most PrCA, despite degraded information transmitted by SLDRs. Used in combination with other measurements of the in situ environment, the hunting lowres index could ... Article in Journal/Newspaper Elephant Seals Southern Elephant Seals Weddell Seal Portail HAL-ANR (Agence Nationale de la Recherche) Animal Biotelemetry 3 1