Optimised scat collection protocols for dietary DNA metabarcoding in vertebrates
These spreadsheets provide the sequences counts for the DNA groups found in the scats of Shy Albatross at Albatross Island, Tasmania, Australia. Samples were collected during three stages of the breeding season: Incubation (Late September 2014), Brood (December 2014) and Chick-rearing (March 2014 an...
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Australian Antarctic Data Centre
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Online Access: | https://researchdata.ands.org.au/optimised-scat-collection-metabarcoding-vertebrates/945460 https://doi.org/10.4225/15/57EDACF067ADF https://data.aad.gov.au/metadata/records/AAS_4014_McInnes_et_al_2016 http://nla.gov.au/nla.party-617536 |
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ftands:oai:ands.org.au::945460 2023-05-15T18:25:36+02:00 Optimised scat collection protocols for dietary DNA metabarcoding in vertebrates MCINNES, JULIE C. (hasPrincipalInvestigator) MCINNES, JULIE C. (processor) DEAGLE, BRUCE E. (hasPrincipalInvestigator) DEAGLE, BRUCE E. (processor) ALDERMAN, RACHAEL (hasPrincipalInvestigator) JARMAN, SIMON N. (hasPrincipalInvestigator) JARMAN, SIMON N. (processor) LEA, MARY-ANNE (hasPrincipalInvestigator) RAYMOND, BEN (hasPrincipalInvestigator) Australian Antarctic Data Centre (publisher) Spatial: northlimit=-40.383333; southlimit=-40.383333; westlimit=144.65; eastLimit=144.65; projection=WGS84 Temporal: From 2014-03-28 to 2015-03-31 https://researchdata.ands.org.au/optimised-scat-collection-metabarcoding-vertebrates/945460 https://doi.org/10.4225/15/57EDACF067ADF https://data.aad.gov.au/metadata/records/AAS_4014_McInnes_et_al_2016 http://nla.gov.au/nla.party-617536 unknown Australian Antarctic Data Centre https://researchdata.ands.org.au/optimised-scat-collection-metabarcoding-vertebrates/945460 654d1f2d-2d12-47a1-a423-27dffbef2e43 doi:10.4225/15/57EDACF067ADF AAS_4014_McInnes_et_al_2016 https://data.aad.gov.au/metadata/records/AAS_4014_McInnes_et_al_2016 http://nla.gov.au/nla.party-617536 Australian Antarctic Data Centre biota oceans ALBATROSSES/PETRELS AND ALLIES EARTH SCIENCE BIOLOGICAL CLASSIFICATION ANIMALS/VERTEBRATES BIRDS DNA METABARCODING MISEQ GENOME SEQUENCING SHY ALBATROSS DIET THALASSARCHE CAUTA ALBATROSS ISLAND GEOGRAPHIC REGION > POLAR OCEAN > SOUTHERN OCEAN CONTINENT > AUSTRALIA/NEW ZEALAND > AUSTRALIA > Tasmania dataset ftands https://doi.org/10.4225/15/57EDACF067ADF 2020-01-05T21:31:07Z These spreadsheets provide the sequences counts for the DNA groups found in the scats of Shy Albatross at Albatross Island, Tasmania, Australia. Samples were collected during three stages of the breeding season: Incubation (Late September 2014), Brood (December 2014) and Chick-rearing (March 2014 and 2015). Scat samples were collected from breeding birds, chicks and non-breeders. 'Breeders' were identified as individuals incubating an egg or attending a chick, whereas 'non-breeders' were usually pairs that had reoccupied the colony and were building new practice nests with no chick present. Non-breeders in the colony include immature birds that have not yet bred and mature birds of breeding age that did not breed in a particular season (e.g. no partner or insufficient body condition) Details of the molecular methods and synthesis of this data can be found in: McInnes, J.C., Alderman, R., Deagle, B.E. Lea, M-A., Raymond, B. and Jarman, S.N. 2016. Optimised scat collection protocols for dietary DNA metabarcoding in vertebrates. Methods in Ecology and Evolution. Dataset Southern Ocean Research Data Australia (Australian National Data Service - ANDS) Albatross Island ENVELOPE(-37.332,-37.332,-54.020,-54.020) New Zealand Southern Ocean ENVELOPE(144.65,144.65,-40.383333,-40.383333) |
institution |
Open Polar |
collection |
Research Data Australia (Australian National Data Service - ANDS) |
op_collection_id |
ftands |
language |
unknown |
topic |
biota oceans ALBATROSSES/PETRELS AND ALLIES EARTH SCIENCE BIOLOGICAL CLASSIFICATION ANIMALS/VERTEBRATES BIRDS DNA METABARCODING MISEQ GENOME SEQUENCING SHY ALBATROSS DIET THALASSARCHE CAUTA ALBATROSS ISLAND GEOGRAPHIC REGION > POLAR OCEAN > SOUTHERN OCEAN CONTINENT > AUSTRALIA/NEW ZEALAND > AUSTRALIA > Tasmania |
spellingShingle |
biota oceans ALBATROSSES/PETRELS AND ALLIES EARTH SCIENCE BIOLOGICAL CLASSIFICATION ANIMALS/VERTEBRATES BIRDS DNA METABARCODING MISEQ GENOME SEQUENCING SHY ALBATROSS DIET THALASSARCHE CAUTA ALBATROSS ISLAND GEOGRAPHIC REGION > POLAR OCEAN > SOUTHERN OCEAN CONTINENT > AUSTRALIA/NEW ZEALAND > AUSTRALIA > Tasmania Optimised scat collection protocols for dietary DNA metabarcoding in vertebrates |
topic_facet |
biota oceans ALBATROSSES/PETRELS AND ALLIES EARTH SCIENCE BIOLOGICAL CLASSIFICATION ANIMALS/VERTEBRATES BIRDS DNA METABARCODING MISEQ GENOME SEQUENCING SHY ALBATROSS DIET THALASSARCHE CAUTA ALBATROSS ISLAND GEOGRAPHIC REGION > POLAR OCEAN > SOUTHERN OCEAN CONTINENT > AUSTRALIA/NEW ZEALAND > AUSTRALIA > Tasmania |
description |
These spreadsheets provide the sequences counts for the DNA groups found in the scats of Shy Albatross at Albatross Island, Tasmania, Australia. Samples were collected during three stages of the breeding season: Incubation (Late September 2014), Brood (December 2014) and Chick-rearing (March 2014 and 2015). Scat samples were collected from breeding birds, chicks and non-breeders. 'Breeders' were identified as individuals incubating an egg or attending a chick, whereas 'non-breeders' were usually pairs that had reoccupied the colony and were building new practice nests with no chick present. Non-breeders in the colony include immature birds that have not yet bred and mature birds of breeding age that did not breed in a particular season (e.g. no partner or insufficient body condition) Details of the molecular methods and synthesis of this data can be found in: McInnes, J.C., Alderman, R., Deagle, B.E. Lea, M-A., Raymond, B. and Jarman, S.N. 2016. Optimised scat collection protocols for dietary DNA metabarcoding in vertebrates. Methods in Ecology and Evolution. |
author2 |
MCINNES, JULIE C. (hasPrincipalInvestigator) MCINNES, JULIE C. (processor) DEAGLE, BRUCE E. (hasPrincipalInvestigator) DEAGLE, BRUCE E. (processor) ALDERMAN, RACHAEL (hasPrincipalInvestigator) JARMAN, SIMON N. (hasPrincipalInvestigator) JARMAN, SIMON N. (processor) LEA, MARY-ANNE (hasPrincipalInvestigator) RAYMOND, BEN (hasPrincipalInvestigator) Australian Antarctic Data Centre (publisher) |
format |
Dataset |
title |
Optimised scat collection protocols for dietary DNA metabarcoding in vertebrates |
title_short |
Optimised scat collection protocols for dietary DNA metabarcoding in vertebrates |
title_full |
Optimised scat collection protocols for dietary DNA metabarcoding in vertebrates |
title_fullStr |
Optimised scat collection protocols for dietary DNA metabarcoding in vertebrates |
title_full_unstemmed |
Optimised scat collection protocols for dietary DNA metabarcoding in vertebrates |
title_sort |
optimised scat collection protocols for dietary dna metabarcoding in vertebrates |
publisher |
Australian Antarctic Data Centre |
url |
https://researchdata.ands.org.au/optimised-scat-collection-metabarcoding-vertebrates/945460 https://doi.org/10.4225/15/57EDACF067ADF https://data.aad.gov.au/metadata/records/AAS_4014_McInnes_et_al_2016 http://nla.gov.au/nla.party-617536 |
op_coverage |
Spatial: northlimit=-40.383333; southlimit=-40.383333; westlimit=144.65; eastLimit=144.65; projection=WGS84 Temporal: From 2014-03-28 to 2015-03-31 |
long_lat |
ENVELOPE(-37.332,-37.332,-54.020,-54.020) ENVELOPE(144.65,144.65,-40.383333,-40.383333) |
geographic |
Albatross Island New Zealand Southern Ocean |
geographic_facet |
Albatross Island New Zealand Southern Ocean |
genre |
Southern Ocean |
genre_facet |
Southern Ocean |
op_source |
Australian Antarctic Data Centre |
op_relation |
https://researchdata.ands.org.au/optimised-scat-collection-metabarcoding-vertebrates/945460 654d1f2d-2d12-47a1-a423-27dffbef2e43 doi:10.4225/15/57EDACF067ADF AAS_4014_McInnes_et_al_2016 https://data.aad.gov.au/metadata/records/AAS_4014_McInnes_et_al_2016 http://nla.gov.au/nla.party-617536 |
op_doi |
https://doi.org/10.4225/15/57EDACF067ADF |
_version_ |
1766207165032300544 |