Bacterial numbers in year five of SRE4 experiment by most probable number count

Most probable number counts of bacteria in sediment samples from the Sediment Recruitment Experiment 4. Samples were taken immediately after the collection of sediment, after the addition of the oils to the sediment and after five years in situ incubation in O'Brien Bay near Casey station in th...

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Other Authors: POWELL, SHANE (hasPrincipalInvestigator), POWELL, SHANE (processor), BOWMAN, JOHN (hasPrincipalInvestigator), Australian Antarctic Data Centre (publisher)
Format: Dataset
Language:unknown
Published: Australian Antarctic Data Centre
Subjects:
Online Access:https://researchdata.ands.org.au/bacterial-numbers-year-number-count/701817
https://doi.org/10.26179/5d3fa26ddad36
https://data.aad.gov.au/metadata/records/SRE4_hydrocarbondegrading_MPN_2006
http://nla.gov.au/nla.party-617536
id ftands:oai:ands.org.au::701817
record_format openpolar
institution Open Polar
collection Research Data Australia (Australian National Data Service - ANDS)
op_collection_id ftands
language unknown
topic environment
CONTAMINANT LEVELS/SPILLS
EARTH SCIENCE
HUMAN DIMENSIONS
ENVIRONMENTAL IMPACTS
OIL SPILLS
PETROLEUM
SOLID EARTH
EARTH GASES/LIQUIDS
SEDIMENT CHEMISTRY
OCEANS
MARINE SEDIMENTS
BACTERIA/ARCHAEA
BIOLOGICAL CLASSIFICATION
EARTH SCIENCE &gt
BIOSPHERE &gt
ECOSYSTEMS &gt
MARINE ECOSYSTEMS &gt
BENTHIC
bacteria
most probable number
synthetic lubricant
hydrocarbon biodegradation
biodegradable lubricant
used synthetic lubricant
special antarctic blend
diesel
sediment
SEDIMENT CORERS
INCUBATOR
FIELD SURVEYS
LABORATORY
CONTINENT &gt
ANTARCTICA &gt
Casey
GEOGRAPHIC REGION &gt
POLAR
spellingShingle environment
CONTAMINANT LEVELS/SPILLS
EARTH SCIENCE
HUMAN DIMENSIONS
ENVIRONMENTAL IMPACTS
OIL SPILLS
PETROLEUM
SOLID EARTH
EARTH GASES/LIQUIDS
SEDIMENT CHEMISTRY
OCEANS
MARINE SEDIMENTS
BACTERIA/ARCHAEA
BIOLOGICAL CLASSIFICATION
EARTH SCIENCE &gt
BIOSPHERE &gt
ECOSYSTEMS &gt
MARINE ECOSYSTEMS &gt
BENTHIC
bacteria
most probable number
synthetic lubricant
hydrocarbon biodegradation
biodegradable lubricant
used synthetic lubricant
special antarctic blend
diesel
sediment
SEDIMENT CORERS
INCUBATOR
FIELD SURVEYS
LABORATORY
CONTINENT &gt
ANTARCTICA &gt
Casey
GEOGRAPHIC REGION &gt
POLAR
Bacterial numbers in year five of SRE4 experiment by most probable number count
topic_facet environment
CONTAMINANT LEVELS/SPILLS
EARTH SCIENCE
HUMAN DIMENSIONS
ENVIRONMENTAL IMPACTS
OIL SPILLS
PETROLEUM
SOLID EARTH
EARTH GASES/LIQUIDS
SEDIMENT CHEMISTRY
OCEANS
MARINE SEDIMENTS
BACTERIA/ARCHAEA
BIOLOGICAL CLASSIFICATION
EARTH SCIENCE &gt
BIOSPHERE &gt
ECOSYSTEMS &gt
MARINE ECOSYSTEMS &gt
BENTHIC
bacteria
most probable number
synthetic lubricant
hydrocarbon biodegradation
biodegradable lubricant
used synthetic lubricant
special antarctic blend
diesel
sediment
SEDIMENT CORERS
INCUBATOR
FIELD SURVEYS
LABORATORY
CONTINENT &gt
ANTARCTICA &gt
Casey
GEOGRAPHIC REGION &gt
POLAR
description Most probable number counts of bacteria in sediment samples from the Sediment Recruitment Experiment 4. Samples were taken immediately after the collection of sediment, after the addition of the oils to the sediment and after five years in situ incubation in O'Brien Bay near Casey station in the Windmill Islands region of Antarctica. Sediment was treated by the addition of oil (four different types: synthetic lubricant, used synthetic lubricant, biodegradable lubricant and special antarctic blend diesel) and the number of bacteria able to degrade components of Special Antarctic Blend diesel (SAB) was determined using an MPN method on a marine mineral medium with Special Antarctic Blend diesel as sole carbon source. The total number of aerobic heterotrophic bacteria present was also estimated for the control and SAB treatments using marine medium 2216 from Bacto. Data are presented as the most-probable-number of bacteria per gram of wet sediment. See also the metadata record 'SRE4_hydrocarbondegrading_MPN_2001'. This work was completed as part of ASAC projects 2201 and 2672 (ASAC_2201, ASAC_2672). More information about the dataset is presented on the summary worksheet of the download file - this information is copied below: 4 -tube Most probable number counts were carried out on sediment samples from the SRE4 experiment collected in Dec 2006. Sample names consist of: treatment:block: replicate where B = biodegradable oil C = control L = lubricant S = SAB diesel U = Used lubricant Blocks 3, 11, 18 and 20 were sampled in this season. 3 replicates (A,B,C) were carried out for each sample. Most probable number was calculated using the MPN Calculator available from: http:/members.ync.net/mcuriale/mpn/index.html Total heterotrophs were estimated for control and SAB treatments only. Using Difco marine medium 2216 in 96-well titre trays. 1:10 serial dilutions were performed in a total of 200 microlitres of medium (as indicated, some samples were done with 1:5 serial dilutions). Plates were incubated at 4 degrees C for 7 days. Plates were scored manually with visually turbid wells being positive. Numbers of SAB-degrading bacteria were estimated for all treatments. SAB-degrading bacteria were estimated using an artificial seawater broth (see reference below) and 5 microlitres of SAB as carbon source. 1:5 serial dilutions were made in a total of 200ul of medium. Plates were incubated at 4 degrees C for 4 weeks. At this time 40 microlitres of INT solution were added and incubated for another two days (INT = 2.25 g/l of iodonitrotetrazolium chloride). Plates were scored manually, with the presence of a red precipitate or red colour being positive. Numbers of alkane-degrading bacteria were estimated for control and SAB treatments only. n-alkane-degrading bacteria were estimated using an artificial seawater broth (see reference below) and 3 microlitres of a 1:1 mix of hexadecane and nonane as carbon source. 1:5 serial dilutions were made in a total of 200 microlitres of medium. Plates were incubated at 4 degrees C for 4 weeks. At this time 40 microlitres of INT solution were added and incubated for another two days (INT = 2.25 g/l of iodonitrotetrazolium chloride). Plates were scored manually, with the presence of a red precipitate or red colour being positive.
author2 POWELL, SHANE (hasPrincipalInvestigator)
POWELL, SHANE (processor)
BOWMAN, JOHN (hasPrincipalInvestigator)
Australian Antarctic Data Centre (publisher)
format Dataset
title Bacterial numbers in year five of SRE4 experiment by most probable number count
title_short Bacterial numbers in year five of SRE4 experiment by most probable number count
title_full Bacterial numbers in year five of SRE4 experiment by most probable number count
title_fullStr Bacterial numbers in year five of SRE4 experiment by most probable number count
title_full_unstemmed Bacterial numbers in year five of SRE4 experiment by most probable number count
title_sort bacterial numbers in year five of sre4 experiment by most probable number count
publisher Australian Antarctic Data Centre
url https://researchdata.ands.org.au/bacterial-numbers-year-number-count/701817
https://doi.org/10.26179/5d3fa26ddad36
https://data.aad.gov.au/metadata/records/SRE4_hydrocarbondegrading_MPN_2006
http://nla.gov.au/nla.party-617536
op_coverage Spatial: northlimit=-66.3; southlimit=-66.35; westlimit=110.3; eastLimit=110.35; projection=WGS84
Temporal: From 2006-11-01 to 2006-12-20
long_lat ENVELOPE(110.417,110.417,-66.350,-66.350)
ENVELOPE(110.528,110.528,-66.282,-66.282)
ENVELOPE(110.524,110.524,-66.302,-66.302)
ENVELOPE(110.3,110.35,-66.3,-66.35)
geographic Antarctic
Windmill Islands
Casey Station
O'Brien Bay
geographic_facet Antarctic
Windmill Islands
Casey Station
O'Brien Bay
genre Antarc*
Antarctic
Antarctica
Windmill Islands
genre_facet Antarc*
Antarctic
Antarctica
Windmill Islands
op_source Australian Antarctic Data Centre
op_relation https://researchdata.ands.org.au/bacterial-numbers-year-number-count/701817
fd45ad9a-9b3a-4241-b1c4-6edec93a5579
doi:10.26179/5d3fa26ddad36
SRE4_hydrocarbondegrading_MPN_2006
https://data.aad.gov.au/metadata/records/SRE4_hydrocarbondegrading_MPN_2006
http://nla.gov.au/nla.party-617536
op_doi https://doi.org/10.26179/5d3fa26ddad36
_version_ 1766246103251943424
spelling ftands:oai:ands.org.au::701817 2023-05-15T13:46:59+02:00 Bacterial numbers in year five of SRE4 experiment by most probable number count POWELL, SHANE (hasPrincipalInvestigator) POWELL, SHANE (processor) BOWMAN, JOHN (hasPrincipalInvestigator) Australian Antarctic Data Centre (publisher) Spatial: northlimit=-66.3; southlimit=-66.35; westlimit=110.3; eastLimit=110.35; projection=WGS84 Temporal: From 2006-11-01 to 2006-12-20 https://researchdata.ands.org.au/bacterial-numbers-year-number-count/701817 https://doi.org/10.26179/5d3fa26ddad36 https://data.aad.gov.au/metadata/records/SRE4_hydrocarbondegrading_MPN_2006 http://nla.gov.au/nla.party-617536 unknown Australian Antarctic Data Centre https://researchdata.ands.org.au/bacterial-numbers-year-number-count/701817 fd45ad9a-9b3a-4241-b1c4-6edec93a5579 doi:10.26179/5d3fa26ddad36 SRE4_hydrocarbondegrading_MPN_2006 https://data.aad.gov.au/metadata/records/SRE4_hydrocarbondegrading_MPN_2006 http://nla.gov.au/nla.party-617536 Australian Antarctic Data Centre environment CONTAMINANT LEVELS/SPILLS EARTH SCIENCE HUMAN DIMENSIONS ENVIRONMENTAL IMPACTS OIL SPILLS PETROLEUM SOLID EARTH EARTH GASES/LIQUIDS SEDIMENT CHEMISTRY OCEANS MARINE SEDIMENTS BACTERIA/ARCHAEA BIOLOGICAL CLASSIFICATION EARTH SCIENCE &gt BIOSPHERE &gt ECOSYSTEMS &gt MARINE ECOSYSTEMS &gt BENTHIC bacteria most probable number synthetic lubricant hydrocarbon biodegradation biodegradable lubricant used synthetic lubricant special antarctic blend diesel sediment SEDIMENT CORERS INCUBATOR FIELD SURVEYS LABORATORY CONTINENT &gt ANTARCTICA &gt Casey GEOGRAPHIC REGION &gt POLAR dataset ftands https://doi.org/10.26179/5d3fa26ddad36 2020-01-05T21:19:19Z Most probable number counts of bacteria in sediment samples from the Sediment Recruitment Experiment 4. Samples were taken immediately after the collection of sediment, after the addition of the oils to the sediment and after five years in situ incubation in O'Brien Bay near Casey station in the Windmill Islands region of Antarctica. Sediment was treated by the addition of oil (four different types: synthetic lubricant, used synthetic lubricant, biodegradable lubricant and special antarctic blend diesel) and the number of bacteria able to degrade components of Special Antarctic Blend diesel (SAB) was determined using an MPN method on a marine mineral medium with Special Antarctic Blend diesel as sole carbon source. The total number of aerobic heterotrophic bacteria present was also estimated for the control and SAB treatments using marine medium 2216 from Bacto. Data are presented as the most-probable-number of bacteria per gram of wet sediment. See also the metadata record 'SRE4_hydrocarbondegrading_MPN_2001'. This work was completed as part of ASAC projects 2201 and 2672 (ASAC_2201, ASAC_2672). More information about the dataset is presented on the summary worksheet of the download file - this information is copied below: 4 -tube Most probable number counts were carried out on sediment samples from the SRE4 experiment collected in Dec 2006. Sample names consist of: treatment:block: replicate where B = biodegradable oil C = control L = lubricant S = SAB diesel U = Used lubricant Blocks 3, 11, 18 and 20 were sampled in this season. 3 replicates (A,B,C) were carried out for each sample. Most probable number was calculated using the MPN Calculator available from: http:/members.ync.net/mcuriale/mpn/index.html Total heterotrophs were estimated for control and SAB treatments only. Using Difco marine medium 2216 in 96-well titre trays. 1:10 serial dilutions were performed in a total of 200 microlitres of medium (as indicated, some samples were done with 1:5 serial dilutions). Plates were incubated at 4 degrees C for 7 days. Plates were scored manually with visually turbid wells being positive. Numbers of SAB-degrading bacteria were estimated for all treatments. SAB-degrading bacteria were estimated using an artificial seawater broth (see reference below) and 5 microlitres of SAB as carbon source. 1:5 serial dilutions were made in a total of 200ul of medium. Plates were incubated at 4 degrees C for 4 weeks. At this time 40 microlitres of INT solution were added and incubated for another two days (INT = 2.25 g/l of iodonitrotetrazolium chloride). Plates were scored manually, with the presence of a red precipitate or red colour being positive. Numbers of alkane-degrading bacteria were estimated for control and SAB treatments only. n-alkane-degrading bacteria were estimated using an artificial seawater broth (see reference below) and 3 microlitres of a 1:1 mix of hexadecane and nonane as carbon source. 1:5 serial dilutions were made in a total of 200 microlitres of medium. Plates were incubated at 4 degrees C for 4 weeks. At this time 40 microlitres of INT solution were added and incubated for another two days (INT = 2.25 g/l of iodonitrotetrazolium chloride). Plates were scored manually, with the presence of a red precipitate or red colour being positive. Dataset Antarc* Antarctic Antarctica Windmill Islands Research Data Australia (Australian National Data Service - ANDS) Antarctic Windmill Islands ENVELOPE(110.417,110.417,-66.350,-66.350) Casey Station ENVELOPE(110.528,110.528,-66.282,-66.282) O'Brien Bay ENVELOPE(110.524,110.524,-66.302,-66.302) ENVELOPE(110.3,110.35,-66.3,-66.35)