Biodiversity and low temperature biology of Antarctic yeasts

Metadata record for data from ASAC Project 1002 See the link below for public details on this project. Taken from the abstracts of the referenced papers: A morphological and physiological characterization of yeast strains CBS 8908, CBS 8915, CBS 8920, CBS 8925(T) and CBS 8926, isolated from Antarcti...

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Other Authors: WATSON, KEN (hasPrincipalInvestigator), WATSON, KEN (processor), Australian Antarctic Data Centre (publisher)
Format: Dataset
Language:unknown
Published: Australian Antarctic Data Centre
Subjects:
Online Access:https://researchdata.ands.org.au/biodiversity-low-temperature-antarctic-yeasts/699336
https://data.aad.gov.au/metadata/records/ASAC_1002
http://nla.gov.au/nla.party-617536
id ftands:oai:ands.org.au::699336
record_format openpolar
institution Open Polar
collection Research Data Australia (Australian National Data Service - ANDS)
op_collection_id ftands
language unknown
topic biota
YEASTS/TRUFFLES
EARTH SCIENCE
BIOLOGICAL CLASSIFICATION
FUNGI
yeast
soil
CONTINENT &gt
ANTARCTICA
GEOGRAPHIC REGION &gt
POLAR
spellingShingle biota
YEASTS/TRUFFLES
EARTH SCIENCE
BIOLOGICAL CLASSIFICATION
FUNGI
yeast
soil
CONTINENT &gt
ANTARCTICA
GEOGRAPHIC REGION &gt
POLAR
Biodiversity and low temperature biology of Antarctic yeasts
topic_facet biota
YEASTS/TRUFFLES
EARTH SCIENCE
BIOLOGICAL CLASSIFICATION
FUNGI
yeast
soil
CONTINENT &gt
ANTARCTICA
GEOGRAPHIC REGION &gt
POLAR
description Metadata record for data from ASAC Project 1002 See the link below for public details on this project. Taken from the abstracts of the referenced papers: A morphological and physiological characterization of yeast strains CBS 8908, CBS 8915, CBS 8920, CBS 8925(T) and CBS 8926, isolated from Antarctic soils, was performed. Phylogenetic analyses of the sequences of the D1/D2 regions and the adjacent internal transcribed spacer (ITS) regions of the large-subunit rDNA of these strains placed them into the Tremellales clade of the Hymenomycetes. The sequence data identified strains CBS 8908, CBS 8915 and CBS 8920 as belonging to the species Cryptococcus victoriae. Strains CBS 8925(T) and CBS 8926 were found to represent an unique clade within the Hymenomycetes, with Dioszegia crocea CBS 6714(T) being their closest phylogenetic relative. Fatty acid composition and proteome fingerprint data for these novel strains were also obtained. No sexual state was observed. A novel basidiomycetous species, Cryptococcus statzelliae, is proposed for strains CBS 8925(T) and CBS 8926. ####### Soil, snow and organic material, collected in November 1997 from the Vestfold Hills, Davis Base, Antarctica, were screened for yeasts. Two isolates, which were shown to be indistinguishable by rDNA sequencing and protein analysis by SDS-PAGE, are described in this communication as a novel species, Cryptococcus watticus sp. nov. (type culture, CBS 9496T=NRRL Y-27556T). Sequence analyses of the 26S rDNA D1/D2 region placed C. watticus in the hymenomycetous yeasts in a cluster with Holtermannia corniformis and Cryptococcus nyarrowii. This species has been allocated to the genus Cryptococcus on the basis of physiological and morphological characteristics. ####### In December 1997, 196 soil and snow samples were collected from Vestfold Hills, Davis Base, Antarctica. Two isolates, CBS 8804T (pink colonies) and CBS 8805 (yellow colonies), were shown by proteome analysis and DNA sequencing to represent the same species. Results from the sequencing of the D1/D2 region of the large rDNA subunit placed this species in the hymenomycetous tree in a unique sister clade to the Trichosporonales and the Tremellales. The clade consists of Holtermannia corniformis CBS 6979 and CBS strains 8804T, 8805, 8016, 7712, 7713 and 7743. Morphological and physiological characteristics placed this species in the genus Cryptococcus, with characteristics including the assimilation of D-glucuronate and myo-inositol, no fermentation, positive Diazonium blue B and urease reactions, absence of sexual reproduction and production of starch-like compounds. Fatty acid analysis identified large proportions of polyunsaturated lipids, mainly linoleic (C18:2) and, to a lesser extent, linolenic (C18:3) acids. On the basis of the physiological and phylogenetic data, isolates CBS 8804T and CBS 8805 are described as Cryptococcus nyarrowii sp. nov. ####### Worldwide glaciers are annually retreating due to global overheating and this phenomenon determines the potential lost of microbial diversity represented by psychrophilic microbial population sharing these peculiar habitats. In this context, yeast strains, all unable to grow above 20 degrees C, consisting of 42 strains from Antarctic soil and 14 strains isolated from Alpine Glacier, were isolated and grouped together based on similar morphological and physiological characteristics. Sequences of the D1/D2 and ITS regions of the ribosomal DNA confirmed the previous analyses and demonstrated that the strains belong to unknown species. Three new species are proposed: Mrakia robertii sp. nov. (type strain CBS 8912), Mrakia blollopis sp. nov. (type strain CBS 8921) and a related anamorphic species Mrakiella niccombsii sp. nov. (type strain CBS 8917). Phylogenetic analysis of the ITS region revealed that the new proposed species were closely related to each other within the Mrakia clade in the order Cystofilobasidiales, class Tremellomycetes. The Mrakia clade now contains 8 sub-clades. Teliospores were observed in all strains except CBS 8918 and for the Mrakiella niccombsii strains.
author2 WATSON, KEN (hasPrincipalInvestigator)
WATSON, KEN (processor)
Australian Antarctic Data Centre (publisher)
format Dataset
title Biodiversity and low temperature biology of Antarctic yeasts
title_short Biodiversity and low temperature biology of Antarctic yeasts
title_full Biodiversity and low temperature biology of Antarctic yeasts
title_fullStr Biodiversity and low temperature biology of Antarctic yeasts
title_full_unstemmed Biodiversity and low temperature biology of Antarctic yeasts
title_sort biodiversity and low temperature biology of antarctic yeasts
publisher Australian Antarctic Data Centre
url https://researchdata.ands.org.au/biodiversity-low-temperature-antarctic-yeasts/699336
https://data.aad.gov.au/metadata/records/ASAC_1002
http://nla.gov.au/nla.party-617536
op_coverage Spatial: northlimit=-60.0; southlimit=-70.0; westlimit=62.0; eastLimit=159.0; projection=WGS84
Temporal: From 1996-09-30 to 1997-03-31
long_lat ENVELOPE(62.0,159.0,-60.0,-70.0)
geographic Antarctic
Vestfold
Vestfold Hills
geographic_facet Antarctic
Vestfold
Vestfold Hills
genre Antarc*
Antarctic
Antarctica
Cryptococcus victoriae
genre_facet Antarc*
Antarctic
Antarctica
Cryptococcus victoriae
op_source Australian Antarctic Data Centre
op_relation https://researchdata.ands.org.au/biodiversity-low-temperature-antarctic-yeasts/699336
c2cfa88a-a0a1-4115-b59d-e7ce25d8c4a5
ASAC_1002
https://data.aad.gov.au/metadata/records/ASAC_1002
http://nla.gov.au/nla.party-617536
_version_ 1766245816743231488
spelling ftands:oai:ands.org.au::699336 2023-05-15T13:46:57+02:00 Biodiversity and low temperature biology of Antarctic yeasts WATSON, KEN (hasPrincipalInvestigator) WATSON, KEN (processor) Australian Antarctic Data Centre (publisher) Spatial: northlimit=-60.0; southlimit=-70.0; westlimit=62.0; eastLimit=159.0; projection=WGS84 Temporal: From 1996-09-30 to 1997-03-31 https://researchdata.ands.org.au/biodiversity-low-temperature-antarctic-yeasts/699336 https://data.aad.gov.au/metadata/records/ASAC_1002 http://nla.gov.au/nla.party-617536 unknown Australian Antarctic Data Centre https://researchdata.ands.org.au/biodiversity-low-temperature-antarctic-yeasts/699336 c2cfa88a-a0a1-4115-b59d-e7ce25d8c4a5 ASAC_1002 https://data.aad.gov.au/metadata/records/ASAC_1002 http://nla.gov.au/nla.party-617536 Australian Antarctic Data Centre biota YEASTS/TRUFFLES EARTH SCIENCE BIOLOGICAL CLASSIFICATION FUNGI yeast soil CONTINENT &gt ANTARCTICA GEOGRAPHIC REGION &gt POLAR dataset ftands 2020-01-05T21:16:02Z Metadata record for data from ASAC Project 1002 See the link below for public details on this project. Taken from the abstracts of the referenced papers: A morphological and physiological characterization of yeast strains CBS 8908, CBS 8915, CBS 8920, CBS 8925(T) and CBS 8926, isolated from Antarctic soils, was performed. Phylogenetic analyses of the sequences of the D1/D2 regions and the adjacent internal transcribed spacer (ITS) regions of the large-subunit rDNA of these strains placed them into the Tremellales clade of the Hymenomycetes. The sequence data identified strains CBS 8908, CBS 8915 and CBS 8920 as belonging to the species Cryptococcus victoriae. Strains CBS 8925(T) and CBS 8926 were found to represent an unique clade within the Hymenomycetes, with Dioszegia crocea CBS 6714(T) being their closest phylogenetic relative. Fatty acid composition and proteome fingerprint data for these novel strains were also obtained. No sexual state was observed. A novel basidiomycetous species, Cryptococcus statzelliae, is proposed for strains CBS 8925(T) and CBS 8926. ####### Soil, snow and organic material, collected in November 1997 from the Vestfold Hills, Davis Base, Antarctica, were screened for yeasts. Two isolates, which were shown to be indistinguishable by rDNA sequencing and protein analysis by SDS-PAGE, are described in this communication as a novel species, Cryptococcus watticus sp. nov. (type culture, CBS 9496T=NRRL Y-27556T). Sequence analyses of the 26S rDNA D1/D2 region placed C. watticus in the hymenomycetous yeasts in a cluster with Holtermannia corniformis and Cryptococcus nyarrowii. This species has been allocated to the genus Cryptococcus on the basis of physiological and morphological characteristics. ####### In December 1997, 196 soil and snow samples were collected from Vestfold Hills, Davis Base, Antarctica. Two isolates, CBS 8804T (pink colonies) and CBS 8805 (yellow colonies), were shown by proteome analysis and DNA sequencing to represent the same species. Results from the sequencing of the D1/D2 region of the large rDNA subunit placed this species in the hymenomycetous tree in a unique sister clade to the Trichosporonales and the Tremellales. The clade consists of Holtermannia corniformis CBS 6979 and CBS strains 8804T, 8805, 8016, 7712, 7713 and 7743. Morphological and physiological characteristics placed this species in the genus Cryptococcus, with characteristics including the assimilation of D-glucuronate and myo-inositol, no fermentation, positive Diazonium blue B and urease reactions, absence of sexual reproduction and production of starch-like compounds. Fatty acid analysis identified large proportions of polyunsaturated lipids, mainly linoleic (C18:2) and, to a lesser extent, linolenic (C18:3) acids. On the basis of the physiological and phylogenetic data, isolates CBS 8804T and CBS 8805 are described as Cryptococcus nyarrowii sp. nov. ####### Worldwide glaciers are annually retreating due to global overheating and this phenomenon determines the potential lost of microbial diversity represented by psychrophilic microbial population sharing these peculiar habitats. In this context, yeast strains, all unable to grow above 20 degrees C, consisting of 42 strains from Antarctic soil and 14 strains isolated from Alpine Glacier, were isolated and grouped together based on similar morphological and physiological characteristics. Sequences of the D1/D2 and ITS regions of the ribosomal DNA confirmed the previous analyses and demonstrated that the strains belong to unknown species. Three new species are proposed: Mrakia robertii sp. nov. (type strain CBS 8912), Mrakia blollopis sp. nov. (type strain CBS 8921) and a related anamorphic species Mrakiella niccombsii sp. nov. (type strain CBS 8917). Phylogenetic analysis of the ITS region revealed that the new proposed species were closely related to each other within the Mrakia clade in the order Cystofilobasidiales, class Tremellomycetes. The Mrakia clade now contains 8 sub-clades. Teliospores were observed in all strains except CBS 8918 and for the Mrakiella niccombsii strains. Dataset Antarc* Antarctic Antarctica Cryptococcus victoriae Research Data Australia (Australian National Data Service - ANDS) Antarctic Vestfold Vestfold Hills ENVELOPE(62.0,159.0,-60.0,-70.0)