2010/11 VMS Geonomics sampling - data collected from the VMS (Voyage Marine Science) voyage of the Aurora Australis
Purpose of future metagenomic (DNA), metaproteomic (protein) and metatranscriptomic (RNA) analysis: For each sample, two drums (~200L each) of seawater were collected. Samples were taken from CTD sites, and surface samples (2m depth) taken at each of these sites. At most of these CTD sites, a deeper...
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Australian Ocean Data Network
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Online Access: | https://researchdata.ands.org.au/201011-vms-geonomics-aurora-australis/687238 https://data.aad.gov.au/metadata/records/VMS_Genomics https://secure3.aad.gov.au/proms/public/projects/report_project_public.cfm?project_no=AAS_3145 https://data.aad.gov.au/eds/3655/download http://data.aad.gov.au/aadc/voyages/display_voyage.cfm?voyage_id=555 http://data.aad.gov.au/aadc/metadata/citation.cfm?entry_id=VMS_Genomics |
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ftands:oai:ands.org.au::687238 2023-05-15T13:46:56+02:00 2010/11 VMS Geonomics sampling - data collected from the VMS (Voyage Marine Science) voyage of the Aurora Australis AADC (originator) AU/AADC > Australian Antarctic Data Centre, Australia (resourceProvider) Spatial: northlimit=-42.0; southlimit=-67.0; westlimit=140.0; eastLimit=150.0 Temporal: From 2011-01-04 to 2011-02-06 https://researchdata.ands.org.au/201011-vms-geonomics-aurora-australis/687238 https://data.aad.gov.au/metadata/records/VMS_Genomics https://secure3.aad.gov.au/proms/public/projects/report_project_public.cfm?project_no=AAS_3145 https://data.aad.gov.au/eds/3655/download http://data.aad.gov.au/aadc/voyages/display_voyage.cfm?voyage_id=555 http://data.aad.gov.au/aadc/metadata/citation.cfm?entry_id=VMS_Genomics unknown Australian Ocean Data Network https://researchdata.ands.org.au/201011-vms-geonomics-aurora-australis/687238 b085ca24-763d-4431-b9df-9d0a00e00037 https://data.aad.gov.au/metadata/records/VMS_Genomics https://secure3.aad.gov.au/proms/public/projects/report_project_public.cfm?project_no=AAS_3145 https://data.aad.gov.au/eds/3655/download http://data.aad.gov.au/aadc/voyages/display_voyage.cfm?voyage_id=555 http://data.aad.gov.au/aadc/metadata/citation.cfm?entry_id=VMS_Genomics https://data.aad.gov.au oceans MARINE ENVIRONMENT MONITORING EARTH SCIENCE PROTISTS BIOLOGICAL CLASSIFICATION VMS Genomics CTD > Conductivity Temperature Depth NISKIN BOTTLES SHIPS R/V AA > R/V Aurora Australis AMD/AU CEOS AMD OCEAN > SOUTHERN OCEAN > Mertz Polynya CONTINENT > ANTARCTICA GEOGRAPHIC REGION > POLAR dataset ftands 2020-01-05T21:08:27Z Purpose of future metagenomic (DNA), metaproteomic (protein) and metatranscriptomic (RNA) analysis: For each sample, two drums (~200L each) of seawater were collected. Samples were taken from CTD sites, and surface samples (2m depth) taken at each of these sites. At most of these CTD sites, a deeper sample was taken according to the location of the DCM at that site. The 200L seawater is pumped through a 20 micron mesh to remove the largest particles, then the biomass is collected on three consecutive filters corresponding to decreasing pore size (3.0 microns, 0.8 microns, 0.1 microns). This is repeated for each sample using the second 200L of seawater to generate duplicates for each sample. The overall aim is to determine the identity of microbes present in the Southern Ocean, and what microbial metabolic processes are in operation. In other words: who is there, and what they are doing. Special emphasis was placed on the SR3 transect. Samples were collected as below. For each sample, a total of six filters were obtained (3x pore sizes, 2x replicates). Each filter is stored in a storage buffer in a 50mL tube, and placed at -80 degrees C for the remainder of the voyage. Dataset Antarc* Antarctica aurora australis Southern Ocean Research Data Australia (Australian National Data Service - ANDS) Southern Ocean ENVELOPE(140.0,150.0,-42.0,-67.0) |
institution |
Open Polar |
collection |
Research Data Australia (Australian National Data Service - ANDS) |
op_collection_id |
ftands |
language |
unknown |
topic |
oceans MARINE ENVIRONMENT MONITORING EARTH SCIENCE PROTISTS BIOLOGICAL CLASSIFICATION VMS Genomics CTD > Conductivity Temperature Depth NISKIN BOTTLES SHIPS R/V AA > R/V Aurora Australis AMD/AU CEOS AMD OCEAN > SOUTHERN OCEAN > Mertz Polynya CONTINENT > ANTARCTICA GEOGRAPHIC REGION > POLAR |
spellingShingle |
oceans MARINE ENVIRONMENT MONITORING EARTH SCIENCE PROTISTS BIOLOGICAL CLASSIFICATION VMS Genomics CTD > Conductivity Temperature Depth NISKIN BOTTLES SHIPS R/V AA > R/V Aurora Australis AMD/AU CEOS AMD OCEAN > SOUTHERN OCEAN > Mertz Polynya CONTINENT > ANTARCTICA GEOGRAPHIC REGION > POLAR 2010/11 VMS Geonomics sampling - data collected from the VMS (Voyage Marine Science) voyage of the Aurora Australis |
topic_facet |
oceans MARINE ENVIRONMENT MONITORING EARTH SCIENCE PROTISTS BIOLOGICAL CLASSIFICATION VMS Genomics CTD > Conductivity Temperature Depth NISKIN BOTTLES SHIPS R/V AA > R/V Aurora Australis AMD/AU CEOS AMD OCEAN > SOUTHERN OCEAN > Mertz Polynya CONTINENT > ANTARCTICA GEOGRAPHIC REGION > POLAR |
description |
Purpose of future metagenomic (DNA), metaproteomic (protein) and metatranscriptomic (RNA) analysis: For each sample, two drums (~200L each) of seawater were collected. Samples were taken from CTD sites, and surface samples (2m depth) taken at each of these sites. At most of these CTD sites, a deeper sample was taken according to the location of the DCM at that site. The 200L seawater is pumped through a 20 micron mesh to remove the largest particles, then the biomass is collected on three consecutive filters corresponding to decreasing pore size (3.0 microns, 0.8 microns, 0.1 microns). This is repeated for each sample using the second 200L of seawater to generate duplicates for each sample. The overall aim is to determine the identity of microbes present in the Southern Ocean, and what microbial metabolic processes are in operation. In other words: who is there, and what they are doing. Special emphasis was placed on the SR3 transect. Samples were collected as below. For each sample, a total of six filters were obtained (3x pore sizes, 2x replicates). Each filter is stored in a storage buffer in a 50mL tube, and placed at -80 degrees C for the remainder of the voyage. |
author2 |
AADC (originator) AU/AADC > Australian Antarctic Data Centre, Australia (resourceProvider) |
format |
Dataset |
title |
2010/11 VMS Geonomics sampling - data collected from the VMS (Voyage Marine Science) voyage of the Aurora Australis |
title_short |
2010/11 VMS Geonomics sampling - data collected from the VMS (Voyage Marine Science) voyage of the Aurora Australis |
title_full |
2010/11 VMS Geonomics sampling - data collected from the VMS (Voyage Marine Science) voyage of the Aurora Australis |
title_fullStr |
2010/11 VMS Geonomics sampling - data collected from the VMS (Voyage Marine Science) voyage of the Aurora Australis |
title_full_unstemmed |
2010/11 VMS Geonomics sampling - data collected from the VMS (Voyage Marine Science) voyage of the Aurora Australis |
title_sort |
2010/11 vms geonomics sampling - data collected from the vms (voyage marine science) voyage of the aurora australis |
publisher |
Australian Ocean Data Network |
url |
https://researchdata.ands.org.au/201011-vms-geonomics-aurora-australis/687238 https://data.aad.gov.au/metadata/records/VMS_Genomics https://secure3.aad.gov.au/proms/public/projects/report_project_public.cfm?project_no=AAS_3145 https://data.aad.gov.au/eds/3655/download http://data.aad.gov.au/aadc/voyages/display_voyage.cfm?voyage_id=555 http://data.aad.gov.au/aadc/metadata/citation.cfm?entry_id=VMS_Genomics |
op_coverage |
Spatial: northlimit=-42.0; southlimit=-67.0; westlimit=140.0; eastLimit=150.0 Temporal: From 2011-01-04 to 2011-02-06 |
long_lat |
ENVELOPE(140.0,150.0,-42.0,-67.0) |
geographic |
Southern Ocean |
geographic_facet |
Southern Ocean |
genre |
Antarc* Antarctica aurora australis Southern Ocean |
genre_facet |
Antarc* Antarctica aurora australis Southern Ocean |
op_source |
https://data.aad.gov.au |
op_relation |
https://researchdata.ands.org.au/201011-vms-geonomics-aurora-australis/687238 b085ca24-763d-4431-b9df-9d0a00e00037 https://data.aad.gov.au/metadata/records/VMS_Genomics https://secure3.aad.gov.au/proms/public/projects/report_project_public.cfm?project_no=AAS_3145 https://data.aad.gov.au/eds/3655/download http://data.aad.gov.au/aadc/voyages/display_voyage.cfm?voyage_id=555 http://data.aad.gov.au/aadc/metadata/citation.cfm?entry_id=VMS_Genomics |
_version_ |
1766245729115832320 |