Analyses of tissue samples from Antarctic Rock-cod (Trematomus bernacchii) collected at sites around Davis station to determine wastewater exposure and sub-lethal impact
The unmodified summary description and a fully described list of sampling locations is provided in the word document in the dataset download. This metadata record will contain the results of analyses of tissue samples from Antarctic Rock-cod (Trematomus bernacchii) collected at sites around Davis st...
Other Authors: | , |
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Format: | Dataset |
Language: | unknown |
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Australian Ocean Data Network
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Online Access: | https://researchdata.ands.org.au/analyses-tissue-samples-lethal-impact/685605 https://data.aad.gov.au/metadata/records/AAS_4177_Rock_Cod_Wastewater https://data.aad.gov.au/eds/3877/download https://secure3.aad.gov.au/proms/public/projects/report_project_public.cfm?project_no=4177 http://data.aad.gov.au/aadc/metadata/citation.cfm?entry_id=AAS_4177_Rock_Cod_Wastewater |
id |
ftands:oai:ands.org.au::685605 |
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record_format |
openpolar |
institution |
Open Polar |
collection |
Research Data Australia (Australian National Data Service - ANDS) |
op_collection_id |
ftands |
language |
unknown |
topic |
biota environment oceans FISH EARTH SCIENCE BIOLOGICAL CLASSIFICATION ANIMALS/VERTEBRATES CODS/HADDOCKS RAY-FINNED FISHES CONTAMINANT LEVELS/SPILLS HUMAN DIMENSIONS ENVIRONMENTAL IMPACTS OCEAN CONTAMINANTS WATER QUALITY SEWAGE DISPOSAL Antarctic Rock Cod Wastewater Sub-lethal Davis TRAPS FIELD INVESTIGATION FIELD SURVEYS LABORATORY AMD/AU CEOS AMD CONTINENT > ANTARCTICA > Casey GEOGRAPHIC REGION > POLAR OCEAN > SOUTHERN OCEAN |
spellingShingle |
biota environment oceans FISH EARTH SCIENCE BIOLOGICAL CLASSIFICATION ANIMALS/VERTEBRATES CODS/HADDOCKS RAY-FINNED FISHES CONTAMINANT LEVELS/SPILLS HUMAN DIMENSIONS ENVIRONMENTAL IMPACTS OCEAN CONTAMINANTS WATER QUALITY SEWAGE DISPOSAL Antarctic Rock Cod Wastewater Sub-lethal Davis TRAPS FIELD INVESTIGATION FIELD SURVEYS LABORATORY AMD/AU CEOS AMD CONTINENT > ANTARCTICA > Casey GEOGRAPHIC REGION > POLAR OCEAN > SOUTHERN OCEAN Analyses of tissue samples from Antarctic Rock-cod (Trematomus bernacchii) collected at sites around Davis station to determine wastewater exposure and sub-lethal impact |
topic_facet |
biota environment oceans FISH EARTH SCIENCE BIOLOGICAL CLASSIFICATION ANIMALS/VERTEBRATES CODS/HADDOCKS RAY-FINNED FISHES CONTAMINANT LEVELS/SPILLS HUMAN DIMENSIONS ENVIRONMENTAL IMPACTS OCEAN CONTAMINANTS WATER QUALITY SEWAGE DISPOSAL Antarctic Rock Cod Wastewater Sub-lethal Davis TRAPS FIELD INVESTIGATION FIELD SURVEYS LABORATORY AMD/AU CEOS AMD CONTINENT > ANTARCTICA > Casey GEOGRAPHIC REGION > POLAR OCEAN > SOUTHERN OCEAN |
description |
The unmodified summary description and a fully described list of sampling locations is provided in the word document in the dataset download. This metadata record will contain the results of analyses of tissue samples from Antarctic Rock-cod (Trematomus bernacchii) collected at sites around Davis station to determine wastewater exposure and sub-lethal impact. AAS Project 4177. The results of metal analysis, stable isotope analysis and images of histological analysis of fish from Davis Station are in this dataset. Sample sites and fish collection Antarctic Rock-cod were collected at 6 sites from Prydz Bay near Davis Station East Antarctica, during the 2012/13 summer. Approximately twenty fish were collected from each site by line and in box traps from four sites along a (9 km) spatial gradient starting from the Davis Station wastewater outfall, southward 0km (within 250m of the point of discharge), 1km, 4km and 9km, in the direction of the predominant current. Additionally, two reference sites were sampled 9 km and 16 km north of the discharge point. Once collected, fish were immediately returned to the Davis Station laboratories and sacrificed individually by immersion in an Aqui-s solution (~15ml/L). Once no signs of life were present (approximately 5 min), fish length and weight were measured. Tissues were preserved in various ways for a number of analyses to be conducted at a later date. Stable Isotope analysis. Davis Station Laboratory Dorsolateral muscle tissue from the left side of each individual was removed, placed in aluminium foil and frozen at -20 degrees C for later analysis. Tissue processing A section of frozen tissue was removed (approximately 1 x 1 cm cubed), placed into a clean, acid washed glass crucible and cut into small pieces. This was then dried at 80 degrees C for 48 h. Tissue from each fish was carefully removed and placed into separate 2 ml Eppendorf tubes, each containing an washed, dried stainless steel ball bearing and the lids closed tightly to ensure no moisture could enter. Tissue was crushed into a fine powder by shaking in a Tissue II Lyser. Ball bearings were removed from vials and crushed tissue samples were sent to Cornell University Stable Isotope laboratory for d13C (carbon stable isotope) and d15N (nitrogen stable isotope) analysis. Stable isotope ratios are expressed in parts per thousand units using the standard delta (d) notation d13C and d15N. Data Set This data set consists of an Excel spreadsheet containing raw data of Nitrogen and Carbon Stable Isotope analysis from 6 sites in the Prydz Bay area of East Antarctica. It includes site distance and direction from wastewater discharge point. The file name code stable isotope analysis is; Project number_Season_Taxa_analysis type AAS_4177_12_13_Trematomus_Isotopes Project number : AAS_4177 Season : 2012/13 season Taxa: Trematomus Analysis type: Stable Isotope Metal analysis. Davis Station Laboratory Dorsolateral muscle tissue from the right side of each individual was removed, placed in a plastic zip lock bag and frozen at -20 degrees C for later analysis. Tissue processing 10g of frozen muscle tissue was sent to Advanced Analytical Australia for metal analysis of a suite of metals (Cd, Cr, Cu, Hg, Mn, Zn, Al, Ni, Pb). Data Set This data set consists of an Excel spreadsheet containing raw data of metal analysis (mg/kg) from 6 sites in the Prydz Bay area of East Antarctica. It includes site distance and direction from wastewater discharge point. The file name code stable isotope analysis is; Project number_Season_Taxa_analysis type AAS_4177_12_13_Trematomus_Metals Project number : AAS_4177 Season : 2012/13 season Taxa: Trematomus Analysis type: Metal analysis Histological analysis Davis Station Laboratory A small piece of a number of fish tissues (gill, liver, spleen, head kidney, gonad), were collected immediately after death of the fish to ensure no degradation of tissue and preserved in 10% seawater buffered formalin for later analysis Tissue processing Each piece of tissue was dehydrated in ascending grades of ethanol (30-100%), cleared in Histolene and embedded in paraffin wax. Tissue was sectioned using a HM 32 Micron microtome at 4 microns. Standard haematoxylin and eosin (H and E) stain was used to stain all tissue sections. Each section was examined blind (i.e. the examiner did not know the field location of the tissue samples) using a Zeiss AxioPlan microscope at 100-400 x magnification. Histological analysis is ongoing. Data Set This data set consists of a pdf file with images of normal and potential sub-lethal histological alterations. The file name code stable isotope analysis is; Project number_Season_Taxa_analysis type AAS_4177_12_13_Trematomus_Histology Project number : AAS_4177 Season : 2012/13 season Taxa: Trematomus Analysis type: Histopathology |
author2 |
AADC (originator) AU/AADC > Australian Antarctic Data Centre, Australia (resourceProvider) |
format |
Dataset |
title |
Analyses of tissue samples from Antarctic Rock-cod (Trematomus bernacchii) collected at sites around Davis station to determine wastewater exposure and sub-lethal impact |
title_short |
Analyses of tissue samples from Antarctic Rock-cod (Trematomus bernacchii) collected at sites around Davis station to determine wastewater exposure and sub-lethal impact |
title_full |
Analyses of tissue samples from Antarctic Rock-cod (Trematomus bernacchii) collected at sites around Davis station to determine wastewater exposure and sub-lethal impact |
title_fullStr |
Analyses of tissue samples from Antarctic Rock-cod (Trematomus bernacchii) collected at sites around Davis station to determine wastewater exposure and sub-lethal impact |
title_full_unstemmed |
Analyses of tissue samples from Antarctic Rock-cod (Trematomus bernacchii) collected at sites around Davis station to determine wastewater exposure and sub-lethal impact |
title_sort |
analyses of tissue samples from antarctic rock-cod (trematomus bernacchii) collected at sites around davis station to determine wastewater exposure and sub-lethal impact |
publisher |
Australian Ocean Data Network |
url |
https://researchdata.ands.org.au/analyses-tissue-samples-lethal-impact/685605 https://data.aad.gov.au/metadata/records/AAS_4177_Rock_Cod_Wastewater https://data.aad.gov.au/eds/3877/download https://secure3.aad.gov.au/proms/public/projects/report_project_public.cfm?project_no=4177 http://data.aad.gov.au/aadc/metadata/citation.cfm?entry_id=AAS_4177_Rock_Cod_Wastewater |
op_coverage |
Spatial: northlimit=-68.41675; southlimit=-68.41675; westlimit=78.353226; eastLimit=78.353226 Spatial: northlimit=-68.52006; southlimit=-68.52006; westlimit=77.97083; eastLimit=77.97083 Spatial: northlimit=-68.659836; southlimit=-68.659836; westlimit=77.83425; eastLimit=77.83425 Spatial: northlimit=-68.61667; southlimit=-68.61667; westlimit=78.333336; eastLimit=78.333336 Spatial: northlimit=-68.61422; southlimit=-68.61422; westlimit=77.944; eastLimit=77.944 Spatial: northlimit=-68.583336; southlimit=-68.583336; westlimit=77.96667; eastLimit=77.96667 Temporal: From 2012-12-01 to 2013-02-28 |
long_lat |
ENVELOPE(77.968,77.968,-68.576,-68.576) ENVELOPE(77.968,77.968,-68.576,-68.576) ENVELOPE(78.353226,78.353226,-68.41675,-68.41675) ENVELOPE(77.97083,77.97083,-68.52006,-68.52006) ENVELOPE(77.83425,77.83425,-68.659836,-68.659836) ENVELOPE(78.333336,78.333336,-68.61667,-68.61667) ENVELOPE(77.944,77.944,-68.61422,-68.61422) ENVELOPE(77.96667,77.96667,-68.583336,-68.583336) |
geographic |
Antarctic Southern Ocean East Antarctica Prydz Bay Davis Station Davis-Station |
geographic_facet |
Antarctic Southern Ocean East Antarctica Prydz Bay Davis Station Davis-Station |
genre |
Antarc* Antarctic Antarctica East Antarctica Prydz Bay Southern Ocean |
genre_facet |
Antarc* Antarctic Antarctica East Antarctica Prydz Bay Southern Ocean |
op_source |
https://data.aad.gov.au |
op_relation |
https://researchdata.ands.org.au/analyses-tissue-samples-lethal-impact/685605 973eb381-8a65-4b73-96ef-cef540f9ea1e https://data.aad.gov.au/metadata/records/AAS_4177_Rock_Cod_Wastewater https://data.aad.gov.au/eds/3877/download https://secure3.aad.gov.au/proms/public/projects/report_project_public.cfm?project_no=4177 http://data.aad.gov.au/aadc/metadata/citation.cfm?entry_id=AAS_4177_Rock_Cod_Wastewater |
_version_ |
1766245627399766016 |
spelling |
ftands:oai:ands.org.au::685605 2023-05-15T13:46:55+02:00 Analyses of tissue samples from Antarctic Rock-cod (Trematomus bernacchii) collected at sites around Davis station to determine wastewater exposure and sub-lethal impact AADC (originator) AU/AADC > Australian Antarctic Data Centre, Australia (resourceProvider) Spatial: northlimit=-68.41675; southlimit=-68.41675; westlimit=78.353226; eastLimit=78.353226 Spatial: northlimit=-68.52006; southlimit=-68.52006; westlimit=77.97083; eastLimit=77.97083 Spatial: northlimit=-68.659836; southlimit=-68.659836; westlimit=77.83425; eastLimit=77.83425 Spatial: northlimit=-68.61667; southlimit=-68.61667; westlimit=78.333336; eastLimit=78.333336 Spatial: northlimit=-68.61422; southlimit=-68.61422; westlimit=77.944; eastLimit=77.944 Spatial: northlimit=-68.583336; southlimit=-68.583336; westlimit=77.96667; eastLimit=77.96667 Temporal: From 2012-12-01 to 2013-02-28 https://researchdata.ands.org.au/analyses-tissue-samples-lethal-impact/685605 https://data.aad.gov.au/metadata/records/AAS_4177_Rock_Cod_Wastewater https://data.aad.gov.au/eds/3877/download https://secure3.aad.gov.au/proms/public/projects/report_project_public.cfm?project_no=4177 http://data.aad.gov.au/aadc/metadata/citation.cfm?entry_id=AAS_4177_Rock_Cod_Wastewater unknown Australian Ocean Data Network https://researchdata.ands.org.au/analyses-tissue-samples-lethal-impact/685605 973eb381-8a65-4b73-96ef-cef540f9ea1e https://data.aad.gov.au/metadata/records/AAS_4177_Rock_Cod_Wastewater https://data.aad.gov.au/eds/3877/download https://secure3.aad.gov.au/proms/public/projects/report_project_public.cfm?project_no=4177 http://data.aad.gov.au/aadc/metadata/citation.cfm?entry_id=AAS_4177_Rock_Cod_Wastewater https://data.aad.gov.au biota environment oceans FISH EARTH SCIENCE BIOLOGICAL CLASSIFICATION ANIMALS/VERTEBRATES CODS/HADDOCKS RAY-FINNED FISHES CONTAMINANT LEVELS/SPILLS HUMAN DIMENSIONS ENVIRONMENTAL IMPACTS OCEAN CONTAMINANTS WATER QUALITY SEWAGE DISPOSAL Antarctic Rock Cod Wastewater Sub-lethal Davis TRAPS FIELD INVESTIGATION FIELD SURVEYS LABORATORY AMD/AU CEOS AMD CONTINENT > ANTARCTICA > Casey GEOGRAPHIC REGION > POLAR OCEAN > SOUTHERN OCEAN dataset ftands 2020-01-05T21:06:32Z The unmodified summary description and a fully described list of sampling locations is provided in the word document in the dataset download. This metadata record will contain the results of analyses of tissue samples from Antarctic Rock-cod (Trematomus bernacchii) collected at sites around Davis station to determine wastewater exposure and sub-lethal impact. AAS Project 4177. The results of metal analysis, stable isotope analysis and images of histological analysis of fish from Davis Station are in this dataset. Sample sites and fish collection Antarctic Rock-cod were collected at 6 sites from Prydz Bay near Davis Station East Antarctica, during the 2012/13 summer. Approximately twenty fish were collected from each site by line and in box traps from four sites along a (9 km) spatial gradient starting from the Davis Station wastewater outfall, southward 0km (within 250m of the point of discharge), 1km, 4km and 9km, in the direction of the predominant current. Additionally, two reference sites were sampled 9 km and 16 km north of the discharge point. Once collected, fish were immediately returned to the Davis Station laboratories and sacrificed individually by immersion in an Aqui-s solution (~15ml/L). Once no signs of life were present (approximately 5 min), fish length and weight were measured. Tissues were preserved in various ways for a number of analyses to be conducted at a later date. Stable Isotope analysis. Davis Station Laboratory Dorsolateral muscle tissue from the left side of each individual was removed, placed in aluminium foil and frozen at -20 degrees C for later analysis. Tissue processing A section of frozen tissue was removed (approximately 1 x 1 cm cubed), placed into a clean, acid washed glass crucible and cut into small pieces. This was then dried at 80 degrees C for 48 h. Tissue from each fish was carefully removed and placed into separate 2 ml Eppendorf tubes, each containing an washed, dried stainless steel ball bearing and the lids closed tightly to ensure no moisture could enter. Tissue was crushed into a fine powder by shaking in a Tissue II Lyser. Ball bearings were removed from vials and crushed tissue samples were sent to Cornell University Stable Isotope laboratory for d13C (carbon stable isotope) and d15N (nitrogen stable isotope) analysis. Stable isotope ratios are expressed in parts per thousand units using the standard delta (d) notation d13C and d15N. Data Set This data set consists of an Excel spreadsheet containing raw data of Nitrogen and Carbon Stable Isotope analysis from 6 sites in the Prydz Bay area of East Antarctica. It includes site distance and direction from wastewater discharge point. The file name code stable isotope analysis is; Project number_Season_Taxa_analysis type AAS_4177_12_13_Trematomus_Isotopes Project number : AAS_4177 Season : 2012/13 season Taxa: Trematomus Analysis type: Stable Isotope Metal analysis. Davis Station Laboratory Dorsolateral muscle tissue from the right side of each individual was removed, placed in a plastic zip lock bag and frozen at -20 degrees C for later analysis. Tissue processing 10g of frozen muscle tissue was sent to Advanced Analytical Australia for metal analysis of a suite of metals (Cd, Cr, Cu, Hg, Mn, Zn, Al, Ni, Pb). Data Set This data set consists of an Excel spreadsheet containing raw data of metal analysis (mg/kg) from 6 sites in the Prydz Bay area of East Antarctica. It includes site distance and direction from wastewater discharge point. The file name code stable isotope analysis is; Project number_Season_Taxa_analysis type AAS_4177_12_13_Trematomus_Metals Project number : AAS_4177 Season : 2012/13 season Taxa: Trematomus Analysis type: Metal analysis Histological analysis Davis Station Laboratory A small piece of a number of fish tissues (gill, liver, spleen, head kidney, gonad), were collected immediately after death of the fish to ensure no degradation of tissue and preserved in 10% seawater buffered formalin for later analysis Tissue processing Each piece of tissue was dehydrated in ascending grades of ethanol (30-100%), cleared in Histolene and embedded in paraffin wax. Tissue was sectioned using a HM 32 Micron microtome at 4 microns. Standard haematoxylin and eosin (H and E) stain was used to stain all tissue sections. Each section was examined blind (i.e. the examiner did not know the field location of the tissue samples) using a Zeiss AxioPlan microscope at 100-400 x magnification. Histological analysis is ongoing. Data Set This data set consists of a pdf file with images of normal and potential sub-lethal histological alterations. The file name code stable isotope analysis is; Project number_Season_Taxa_analysis type AAS_4177_12_13_Trematomus_Histology Project number : AAS_4177 Season : 2012/13 season Taxa: Trematomus Analysis type: Histopathology Dataset Antarc* Antarctic Antarctica East Antarctica Prydz Bay Southern Ocean Research Data Australia (Australian National Data Service - ANDS) Antarctic Southern Ocean East Antarctica Prydz Bay Davis Station ENVELOPE(77.968,77.968,-68.576,-68.576) Davis-Station ENVELOPE(77.968,77.968,-68.576,-68.576) ENVELOPE(78.353226,78.353226,-68.41675,-68.41675) ENVELOPE(77.97083,77.97083,-68.52006,-68.52006) ENVELOPE(77.83425,77.83425,-68.659836,-68.659836) ENVELOPE(78.333336,78.333336,-68.61667,-68.61667) ENVELOPE(77.944,77.944,-68.61422,-68.61422) ENVELOPE(77.96667,77.96667,-68.583336,-68.583336) |