Sample summary and analysis of biopsy samples collected during the New Zealand Australian Antarctic Ecosystems Voyage 2015
Progress Code: completed Statement: Australian Antarctic Data Centre Note 2018-07-04: Original datasheet was reformatted to fit IPT Biodiversity.AQ standard. The new datasheet "blueWhales2015.csv" provides the dataset ID, record number, record by, preparation, location, country, event day,...
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ftands:oai:ands.org.au::2818593 2023-10-09T21:46:22+02:00 Sample summary and analysis of biopsy samples collected during the New Zealand Australian Antarctic Ecosystems Voyage 2015 Spatial: westlimit=-178; southlimit=-71; eastlimit=164; northlimit=-60 Temporal: From 2015-01-29 to 2015-03-11 https://researchdata.edu.au/sample-summary-analysis-voyage-2015/2818593 unknown Australian Ocean Data Network https://researchdata.edu.au/sample-summary-analysis-voyage-2015/2818593 AAS_4102_Biopsy2015 Dataset DOI AU/AADC > Australian Antarctic Data Centre, Australia biota oceans EARTH SCIENCE > BIOLOGICAL CLASSIFICATION > ANIMALS/VERTEBRATES > MAMMALS > CETACEANS > BALEEN WHALES BIOSPHERE > ECOLOGICAL DYNAMICS > ECOSYSTEM FUNCTIONS ANTARCTIC BLUE WHALE VOYAGE IWC SORP BLUE WHALE HUMPBACK WHALE GENETIC TAGGING MARK RECAPTURE BIOPSY FIREARMS ANTARCTIC BLUE WHALE CAMERAS SHIPS R/V TANGAROA AMD/AU AMD CEOS CONTINENT > ANTARCTICA GEOGRAPHIC REGION > POLAR OCEAN > SOUTHERN OCEAN > ROSS SEA dataset ftands 2023-09-18T22:44:47Z Progress Code: completed Statement: Australian Antarctic Data Centre Note 2018-07-04: Original datasheet was reformatted to fit IPT Biodiversity.AQ standard. The new datasheet "blueWhales2015.csv" provides the dataset ID, record number, record by, preparation, location, country, event day, verbatim latitude and longitude, decimal latitude and longitude, sex, occurrence, and basis of record. The taxonomical organisation is provided to the lowest taxonomical rank that could be determined, after matched in WoRMS (World Register of Marine Species). Purpose The IWC-SORP Antarctic Blue Whale Project aims to derive an up-to-date and precise estimate of the abundance, distribution, and potential recovery of Antarctic blue whales. The most appropriate survey method for achieving this was found to be mark-recapture involving individual photographic and genetic identification, assisted by passive acoustic tracking. Genetic tagging from biopsy samples is a well-established method that enables the identification of individuals from genetic markers such as microsatellites or single nucleotide polymorphisms (SNPs). Biopsy samples were collected from humpback (n=10) and blue whales (n=1) during the NZ/Aus Antarctic Ecosystems Voyage 2015. Biopsy collection from humpback and blue whales was attempted from the bow of the ship using Larsen rifles. Biopsying blue whales from the bow of the RV Tangaroa proved challenging due to the ship’s manoeuvrability and the limited capacity to change speed rapidly. Biopsy samples were split between All Protect (Qiagen), 70% ethanol, and freezing at -20C. . This dataset consists of an excel spreadsheet (biopsy_events.xlsx) summarising biopsy events containing the fields: Date_taken (in UTC) Location (general) where sample collected Latitude Longitude Individual ID Sample ID Name of sampler Sample type Preservative used Species sampled An excel spreadsheet (Biopsy sample info datasheet AEV 2015.xlsx) details the biopsy processing that occurred upon collection of a sample. Where possible, ... Dataset Antarc* Antarctic Antarctica baleen whales Blue whale Humpback Whale Ross Sea Southern Ocean Research Data Australia (Australian National Data Service - ANDS) Antarctic Southern Ocean Ross Sea New Zealand |
institution |
Open Polar |
collection |
Research Data Australia (Australian National Data Service - ANDS) |
op_collection_id |
ftands |
language |
unknown |
topic |
biota oceans EARTH SCIENCE > BIOLOGICAL CLASSIFICATION > ANIMALS/VERTEBRATES > MAMMALS > CETACEANS > BALEEN WHALES BIOSPHERE > ECOLOGICAL DYNAMICS > ECOSYSTEM FUNCTIONS ANTARCTIC BLUE WHALE VOYAGE IWC SORP BLUE WHALE HUMPBACK WHALE GENETIC TAGGING MARK RECAPTURE BIOPSY FIREARMS ANTARCTIC BLUE WHALE CAMERAS SHIPS R/V TANGAROA AMD/AU AMD CEOS CONTINENT > ANTARCTICA GEOGRAPHIC REGION > POLAR OCEAN > SOUTHERN OCEAN > ROSS SEA |
spellingShingle |
biota oceans EARTH SCIENCE > BIOLOGICAL CLASSIFICATION > ANIMALS/VERTEBRATES > MAMMALS > CETACEANS > BALEEN WHALES BIOSPHERE > ECOLOGICAL DYNAMICS > ECOSYSTEM FUNCTIONS ANTARCTIC BLUE WHALE VOYAGE IWC SORP BLUE WHALE HUMPBACK WHALE GENETIC TAGGING MARK RECAPTURE BIOPSY FIREARMS ANTARCTIC BLUE WHALE CAMERAS SHIPS R/V TANGAROA AMD/AU AMD CEOS CONTINENT > ANTARCTICA GEOGRAPHIC REGION > POLAR OCEAN > SOUTHERN OCEAN > ROSS SEA Sample summary and analysis of biopsy samples collected during the New Zealand Australian Antarctic Ecosystems Voyage 2015 |
topic_facet |
biota oceans EARTH SCIENCE > BIOLOGICAL CLASSIFICATION > ANIMALS/VERTEBRATES > MAMMALS > CETACEANS > BALEEN WHALES BIOSPHERE > ECOLOGICAL DYNAMICS > ECOSYSTEM FUNCTIONS ANTARCTIC BLUE WHALE VOYAGE IWC SORP BLUE WHALE HUMPBACK WHALE GENETIC TAGGING MARK RECAPTURE BIOPSY FIREARMS ANTARCTIC BLUE WHALE CAMERAS SHIPS R/V TANGAROA AMD/AU AMD CEOS CONTINENT > ANTARCTICA GEOGRAPHIC REGION > POLAR OCEAN > SOUTHERN OCEAN > ROSS SEA |
description |
Progress Code: completed Statement: Australian Antarctic Data Centre Note 2018-07-04: Original datasheet was reformatted to fit IPT Biodiversity.AQ standard. The new datasheet "blueWhales2015.csv" provides the dataset ID, record number, record by, preparation, location, country, event day, verbatim latitude and longitude, decimal latitude and longitude, sex, occurrence, and basis of record. The taxonomical organisation is provided to the lowest taxonomical rank that could be determined, after matched in WoRMS (World Register of Marine Species). Purpose The IWC-SORP Antarctic Blue Whale Project aims to derive an up-to-date and precise estimate of the abundance, distribution, and potential recovery of Antarctic blue whales. The most appropriate survey method for achieving this was found to be mark-recapture involving individual photographic and genetic identification, assisted by passive acoustic tracking. Genetic tagging from biopsy samples is a well-established method that enables the identification of individuals from genetic markers such as microsatellites or single nucleotide polymorphisms (SNPs). Biopsy samples were collected from humpback (n=10) and blue whales (n=1) during the NZ/Aus Antarctic Ecosystems Voyage 2015. Biopsy collection from humpback and blue whales was attempted from the bow of the ship using Larsen rifles. Biopsying blue whales from the bow of the RV Tangaroa proved challenging due to the ship’s manoeuvrability and the limited capacity to change speed rapidly. Biopsy samples were split between All Protect (Qiagen), 70% ethanol, and freezing at -20C. . This dataset consists of an excel spreadsheet (biopsy_events.xlsx) summarising biopsy events containing the fields: Date_taken (in UTC) Location (general) where sample collected Latitude Longitude Individual ID Sample ID Name of sampler Sample type Preservative used Species sampled An excel spreadsheet (Biopsy sample info datasheet AEV 2015.xlsx) details the biopsy processing that occurred upon collection of a sample. Where possible, ... |
format |
Dataset |
title |
Sample summary and analysis of biopsy samples collected during the New Zealand Australian Antarctic Ecosystems Voyage 2015 |
title_short |
Sample summary and analysis of biopsy samples collected during the New Zealand Australian Antarctic Ecosystems Voyage 2015 |
title_full |
Sample summary and analysis of biopsy samples collected during the New Zealand Australian Antarctic Ecosystems Voyage 2015 |
title_fullStr |
Sample summary and analysis of biopsy samples collected during the New Zealand Australian Antarctic Ecosystems Voyage 2015 |
title_full_unstemmed |
Sample summary and analysis of biopsy samples collected during the New Zealand Australian Antarctic Ecosystems Voyage 2015 |
title_sort |
sample summary and analysis of biopsy samples collected during the new zealand australian antarctic ecosystems voyage 2015 |
publisher |
Australian Ocean Data Network |
url |
https://researchdata.edu.au/sample-summary-analysis-voyage-2015/2818593 |
op_coverage |
Spatial: westlimit=-178; southlimit=-71; eastlimit=164; northlimit=-60 Temporal: From 2015-01-29 to 2015-03-11 |
geographic |
Antarctic Southern Ocean Ross Sea New Zealand |
geographic_facet |
Antarctic Southern Ocean Ross Sea New Zealand |
genre |
Antarc* Antarctic Antarctica baleen whales Blue whale Humpback Whale Ross Sea Southern Ocean |
genre_facet |
Antarc* Antarctic Antarctica baleen whales Blue whale Humpback Whale Ross Sea Southern Ocean |
op_source |
AU/AADC > Australian Antarctic Data Centre, Australia |
op_relation |
https://researchdata.edu.au/sample-summary-analysis-voyage-2015/2818593 AAS_4102_Biopsy2015 Dataset DOI |
_version_ |
1779322061112475648 |