Krill microbiome
Progress Code: completed Statement: Several fecal, stomach and digestive gland samples had low sequencing depth, and could have a high proportion of contaminant bacteria. See the article and supplementary material for more detail. Purpose To characterise the bacterial communities in different krill...
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ftands:oai:ands.org.au::2818248 2024-09-15T17:40:45+00:00 Krill microbiome AADC (owner) AADC, DATA OFFICER (distributor) AADC, DATA OFFICER (custodian) AU/AADC > Australian Antarctic Data Centre, Australia (hasAssociationWith) Australian Antarctic Data Centre (publisher) Australian Antarctic Division (sponsor) CLARKE, LAURENCE (hasPrincipalInvestigator) CLARKE, LAURENCE (author) DEAGLE, BRUCE E. (collaborator) DEAGLE, BRUCE E. (hasPrincipalInvestigator) Deagle, B.E., King, R., Clarke, L. (originator) KING, ROB (collaborator) KING, ROB (hasPrincipalInvestigator) Spatial: westlimit=63.72588333; southlimit=-66.81288333; eastlimit=89.12368333; northlimit=-60.18 Spatial: uplimit=80; downlimit=0 Temporal: From 2016-01-31 to 2016-02-19 https://researchdata.edu.au/krill-microbiome/2818248 unknown Australian Ocean Data Network https://researchdata.edu.au/krill-microbiome/2818248 AAS_4313_KRILL_MICROBIOME AU/AADC > Australian Antarctic Data Centre, Australia biota oceans EARTH SCIENCE > BIOLOGICAL CLASSIFICATION > ANIMALS/INVERTEBRATES > ARTHROPODS > CRUSTACEANS > EUPHAUSIIDS (KRILL) EUPHAUSIA SUPERBA MICROBIOME 16S RRNA ILLUMINA MISEQ ADS > Automated DNA Sequencer R/V AA > R/V Aurora Australis AMD/AU AMD CEOS GEOGRAPHIC REGION > POLAR OCEAN > SOUTHERN OCEAN > SOUTHERN KERGUELEN AXIS dataset ftands 2024-08-06T01:58:58Z Progress Code: completed Statement: Several fecal, stomach and digestive gland samples had low sequencing depth, and could have a high proportion of contaminant bacteria. See the article and supplementary material for more detail. Purpose To characterise the bacterial communities in different krill tissues, and compare them with those in the surrounding seawater. Krill-associated bacterial communities characterised by high-throughput DNA sequencing of the 16S ribosomal RNA gene. The data is decribed in 'Clarke LJ, Suter L, King R, Bissett A and Deagle BE (2019) Antarctic Krill Are Reservoirs for Distinct Southern Ocean Microbial Communities. Front. Microbiol. 9:3226. doi:10.3389/fmicb.2018.03226' available here: https://www.frontiersin.org/articles/10.3389/fmicb.2018.03226/full Dataset Antarc* Antarctic Antarctic Krill aurora australis Euphausia superba Southern Ocean Research Data Australia (Australian National Data Service - ANDS) |
institution |
Open Polar |
collection |
Research Data Australia (Australian National Data Service - ANDS) |
op_collection_id |
ftands |
language |
unknown |
topic |
biota oceans EARTH SCIENCE > BIOLOGICAL CLASSIFICATION > ANIMALS/INVERTEBRATES > ARTHROPODS > CRUSTACEANS > EUPHAUSIIDS (KRILL) EUPHAUSIA SUPERBA MICROBIOME 16S RRNA ILLUMINA MISEQ ADS > Automated DNA Sequencer R/V AA > R/V Aurora Australis AMD/AU AMD CEOS GEOGRAPHIC REGION > POLAR OCEAN > SOUTHERN OCEAN > SOUTHERN KERGUELEN AXIS |
spellingShingle |
biota oceans EARTH SCIENCE > BIOLOGICAL CLASSIFICATION > ANIMALS/INVERTEBRATES > ARTHROPODS > CRUSTACEANS > EUPHAUSIIDS (KRILL) EUPHAUSIA SUPERBA MICROBIOME 16S RRNA ILLUMINA MISEQ ADS > Automated DNA Sequencer R/V AA > R/V Aurora Australis AMD/AU AMD CEOS GEOGRAPHIC REGION > POLAR OCEAN > SOUTHERN OCEAN > SOUTHERN KERGUELEN AXIS Krill microbiome |
topic_facet |
biota oceans EARTH SCIENCE > BIOLOGICAL CLASSIFICATION > ANIMALS/INVERTEBRATES > ARTHROPODS > CRUSTACEANS > EUPHAUSIIDS (KRILL) EUPHAUSIA SUPERBA MICROBIOME 16S RRNA ILLUMINA MISEQ ADS > Automated DNA Sequencer R/V AA > R/V Aurora Australis AMD/AU AMD CEOS GEOGRAPHIC REGION > POLAR OCEAN > SOUTHERN OCEAN > SOUTHERN KERGUELEN AXIS |
description |
Progress Code: completed Statement: Several fecal, stomach and digestive gland samples had low sequencing depth, and could have a high proportion of contaminant bacteria. See the article and supplementary material for more detail. Purpose To characterise the bacterial communities in different krill tissues, and compare them with those in the surrounding seawater. Krill-associated bacterial communities characterised by high-throughput DNA sequencing of the 16S ribosomal RNA gene. The data is decribed in 'Clarke LJ, Suter L, King R, Bissett A and Deagle BE (2019) Antarctic Krill Are Reservoirs for Distinct Southern Ocean Microbial Communities. Front. Microbiol. 9:3226. doi:10.3389/fmicb.2018.03226' available here: https://www.frontiersin.org/articles/10.3389/fmicb.2018.03226/full |
author2 |
AADC (owner) AADC, DATA OFFICER (distributor) AADC, DATA OFFICER (custodian) AU/AADC > Australian Antarctic Data Centre, Australia (hasAssociationWith) Australian Antarctic Data Centre (publisher) Australian Antarctic Division (sponsor) CLARKE, LAURENCE (hasPrincipalInvestigator) CLARKE, LAURENCE (author) DEAGLE, BRUCE E. (collaborator) DEAGLE, BRUCE E. (hasPrincipalInvestigator) Deagle, B.E., King, R., Clarke, L. (originator) KING, ROB (collaborator) KING, ROB (hasPrincipalInvestigator) |
format |
Dataset |
title |
Krill microbiome |
title_short |
Krill microbiome |
title_full |
Krill microbiome |
title_fullStr |
Krill microbiome |
title_full_unstemmed |
Krill microbiome |
title_sort |
krill microbiome |
publisher |
Australian Ocean Data Network |
url |
https://researchdata.edu.au/krill-microbiome/2818248 |
op_coverage |
Spatial: westlimit=63.72588333; southlimit=-66.81288333; eastlimit=89.12368333; northlimit=-60.18 Spatial: uplimit=80; downlimit=0 Temporal: From 2016-01-31 to 2016-02-19 |
genre |
Antarc* Antarctic Antarctic Krill aurora australis Euphausia superba Southern Ocean |
genre_facet |
Antarc* Antarctic Antarctic Krill aurora australis Euphausia superba Southern Ocean |
op_source |
AU/AADC > Australian Antarctic Data Centre, Australia |
op_relation |
https://researchdata.edu.au/krill-microbiome/2818248 AAS_4313_KRILL_MICROBIOME |
_version_ |
1810486779501871104 |