Iron and vitamin B12 metatranscriptomincs co-limitation in sea water collected from the Ross Sea in 2014 (Ross Sea Microb Ecophys project)

<p>We examined the short-term transcriptional response of the 16 Jan 2013 community to cobalamin and iron addition in order to further characterize the nature and implications of this colimitation. RNA sequencing was performed on triplicate samples, 24 h after micronutrient addition. Sequencin...

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Main Authors: Andrew E Allen, Deborah A. Bronk, David A. Hutchins
Format: Dataset
Language:unknown
Published: Biological and Chemical Oceanography Data Management Office (BCO-DMO) 2015
Subjects:
Online Access:https://search.dataone.org/view/sha256:ec27f7419cfb38eb6702b77269925664dff46fceafe29c602f172083e934faf9
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record_format openpolar
spelling dataone:sha256:ec27f7419cfb38eb6702b77269925664dff46fceafe29c602f172083e934faf9 2024-10-03T18:46:25+00:00 Iron and vitamin B12 metatranscriptomincs co-limitation in sea water collected from the Ross Sea in 2014 (Ross Sea Microb Ecophys project) Andrew E Allen Deborah A. Bronk David A. Hutchins 2015-12-07T00:00:00Z https://search.dataone.org/view/sha256:ec27f7419cfb38eb6702b77269925664dff46fceafe29c602f172083e934faf9 unknown Biological and Chemical Oceanography Data Management Office (BCO-DMO) biota, oceans Dataset 2015 dataone:urn:node:BCODMO 2024-10-03T18:08:58Z <p>We examined the short-term transcriptional response of the 16 Jan 2013 community to cobalamin and iron addition in order to further characterize the nature and implications of this colimitation. RNA sequencing was performed on triplicate samples, 24 h after micronutrient addition. Sequencing and assembly statistics are given in Bertrand et al. 2015.</p> <p>Data deposition: The data reported in this paper have been deposited in the NCBI sequence read archive (BioProject accession no. <a href=\"http://www.ncbi.nlm.nih.gov/bioproject/?term=PRJNA281813\" target=\"_blank\">PRJNA281813</a>; BioSample accession nos.SAMN03565520–SAMN03565531). Assembled contigs, predicted peptides, annotation, and transcript abundance data for this study can be found at https://scripps.ucsd.edu/labs/aallen/data/. These files are also accessible via the '<strong>Get Data</strong>' link above.</p> Dataset Ross Sea Biological and Chemical Oceanography Data Management Office (BCO-DMO) (via DataONE) Ross Sea Bertrand ENVELOPE(-67.077,-67.077,-68.514,-68.514)
institution Open Polar
collection Biological and Chemical Oceanography Data Management Office (BCO-DMO) (via DataONE)
op_collection_id dataone:urn:node:BCODMO
language unknown
topic biota, oceans
spellingShingle biota, oceans
Andrew E Allen
Deborah A. Bronk
David A. Hutchins
Iron and vitamin B12 metatranscriptomincs co-limitation in sea water collected from the Ross Sea in 2014 (Ross Sea Microb Ecophys project)
topic_facet biota, oceans
description <p>We examined the short-term transcriptional response of the 16 Jan 2013 community to cobalamin and iron addition in order to further characterize the nature and implications of this colimitation. RNA sequencing was performed on triplicate samples, 24 h after micronutrient addition. Sequencing and assembly statistics are given in Bertrand et al. 2015.</p> <p>Data deposition: The data reported in this paper have been deposited in the NCBI sequence read archive (BioProject accession no. <a href=\"http://www.ncbi.nlm.nih.gov/bioproject/?term=PRJNA281813\" target=\"_blank\">PRJNA281813</a>; BioSample accession nos.SAMN03565520–SAMN03565531). Assembled contigs, predicted peptides, annotation, and transcript abundance data for this study can be found at https://scripps.ucsd.edu/labs/aallen/data/. These files are also accessible via the '<strong>Get Data</strong>' link above.</p>
format Dataset
author Andrew E Allen
Deborah A. Bronk
David A. Hutchins
author_facet Andrew E Allen
Deborah A. Bronk
David A. Hutchins
author_sort Andrew E Allen
title Iron and vitamin B12 metatranscriptomincs co-limitation in sea water collected from the Ross Sea in 2014 (Ross Sea Microb Ecophys project)
title_short Iron and vitamin B12 metatranscriptomincs co-limitation in sea water collected from the Ross Sea in 2014 (Ross Sea Microb Ecophys project)
title_full Iron and vitamin B12 metatranscriptomincs co-limitation in sea water collected from the Ross Sea in 2014 (Ross Sea Microb Ecophys project)
title_fullStr Iron and vitamin B12 metatranscriptomincs co-limitation in sea water collected from the Ross Sea in 2014 (Ross Sea Microb Ecophys project)
title_full_unstemmed Iron and vitamin B12 metatranscriptomincs co-limitation in sea water collected from the Ross Sea in 2014 (Ross Sea Microb Ecophys project)
title_sort iron and vitamin b12 metatranscriptomincs co-limitation in sea water collected from the ross sea in 2014 (ross sea microb ecophys project)
publisher Biological and Chemical Oceanography Data Management Office (BCO-DMO)
publishDate 2015
url https://search.dataone.org/view/sha256:ec27f7419cfb38eb6702b77269925664dff46fceafe29c602f172083e934faf9
long_lat ENVELOPE(-67.077,-67.077,-68.514,-68.514)
geographic Ross Sea
Bertrand
geographic_facet Ross Sea
Bertrand
genre Ross Sea
genre_facet Ross Sea
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