Iron and vitamin B12 metatranscriptomincs co-limitation in sea water collected from the Ross Sea in 2014 (Ross Sea Microb Ecophys project)
<p>We examined the short-term transcriptional response of the 16 Jan 2013 community to cobalamin and iron addition in order to further characterize the nature and implications of this colimitation. RNA sequencing was performed on triplicate samples, 24 h after micronutrient addition. Sequencin...
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Biological and Chemical Oceanography Data Management Office (BCO-DMO)
2015
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dataone:sha256:ec27f7419cfb38eb6702b77269925664dff46fceafe29c602f172083e934faf9 2024-10-03T18:46:25+00:00 Iron and vitamin B12 metatranscriptomincs co-limitation in sea water collected from the Ross Sea in 2014 (Ross Sea Microb Ecophys project) Andrew E Allen Deborah A. Bronk David A. Hutchins 2015-12-07T00:00:00Z https://search.dataone.org/view/sha256:ec27f7419cfb38eb6702b77269925664dff46fceafe29c602f172083e934faf9 unknown Biological and Chemical Oceanography Data Management Office (BCO-DMO) biota, oceans Dataset 2015 dataone:urn:node:BCODMO 2024-10-03T18:08:58Z <p>We examined the short-term transcriptional response of the 16 Jan 2013 community to cobalamin and iron addition in order to further characterize the nature and implications of this colimitation. RNA sequencing was performed on triplicate samples, 24 h after micronutrient addition. Sequencing and assembly statistics are given in Bertrand et al. 2015.</p> <p>Data deposition: The data reported in this paper have been deposited in the NCBI sequence read archive (BioProject accession no. <a href=\"http://www.ncbi.nlm.nih.gov/bioproject/?term=PRJNA281813\" target=\"_blank\">PRJNA281813</a>; BioSample accession nos.SAMN03565520–SAMN03565531). Assembled contigs, predicted peptides, annotation, and transcript abundance data for this study can be found at https://scripps.ucsd.edu/labs/aallen/data/. These files are also accessible via the '<strong>Get Data</strong>' link above.</p> Dataset Ross Sea Biological and Chemical Oceanography Data Management Office (BCO-DMO) (via DataONE) Ross Sea Bertrand ENVELOPE(-67.077,-67.077,-68.514,-68.514) |
institution |
Open Polar |
collection |
Biological and Chemical Oceanography Data Management Office (BCO-DMO) (via DataONE) |
op_collection_id |
dataone:urn:node:BCODMO |
language |
unknown |
topic |
biota, oceans |
spellingShingle |
biota, oceans Andrew E Allen Deborah A. Bronk David A. Hutchins Iron and vitamin B12 metatranscriptomincs co-limitation in sea water collected from the Ross Sea in 2014 (Ross Sea Microb Ecophys project) |
topic_facet |
biota, oceans |
description |
<p>We examined the short-term transcriptional response of the 16 Jan 2013 community to cobalamin and iron addition in order to further characterize the nature and implications of this colimitation. RNA sequencing was performed on triplicate samples, 24 h after micronutrient addition. Sequencing and assembly statistics are given in Bertrand et al. 2015.</p> <p>Data deposition: The data reported in this paper have been deposited in the NCBI sequence read archive (BioProject accession no. <a href=\"http://www.ncbi.nlm.nih.gov/bioproject/?term=PRJNA281813\" target=\"_blank\">PRJNA281813</a>; BioSample accession nos.SAMN03565520–SAMN03565531). Assembled contigs, predicted peptides, annotation, and transcript abundance data for this study can be found at https://scripps.ucsd.edu/labs/aallen/data/. These files are also accessible via the '<strong>Get Data</strong>' link above.</p> |
format |
Dataset |
author |
Andrew E Allen Deborah A. Bronk David A. Hutchins |
author_facet |
Andrew E Allen Deborah A. Bronk David A. Hutchins |
author_sort |
Andrew E Allen |
title |
Iron and vitamin B12 metatranscriptomincs co-limitation in sea water collected from the Ross Sea in 2014 (Ross Sea Microb Ecophys project) |
title_short |
Iron and vitamin B12 metatranscriptomincs co-limitation in sea water collected from the Ross Sea in 2014 (Ross Sea Microb Ecophys project) |
title_full |
Iron and vitamin B12 metatranscriptomincs co-limitation in sea water collected from the Ross Sea in 2014 (Ross Sea Microb Ecophys project) |
title_fullStr |
Iron and vitamin B12 metatranscriptomincs co-limitation in sea water collected from the Ross Sea in 2014 (Ross Sea Microb Ecophys project) |
title_full_unstemmed |
Iron and vitamin B12 metatranscriptomincs co-limitation in sea water collected from the Ross Sea in 2014 (Ross Sea Microb Ecophys project) |
title_sort |
iron and vitamin b12 metatranscriptomincs co-limitation in sea water collected from the ross sea in 2014 (ross sea microb ecophys project) |
publisher |
Biological and Chemical Oceanography Data Management Office (BCO-DMO) |
publishDate |
2015 |
url |
https://search.dataone.org/view/sha256:ec27f7419cfb38eb6702b77269925664dff46fceafe29c602f172083e934faf9 |
long_lat |
ENVELOPE(-67.077,-67.077,-68.514,-68.514) |
geographic |
Ross Sea Bertrand |
geographic_facet |
Ross Sea Bertrand |
genre |
Ross Sea |
genre_facet |
Ross Sea |
_version_ |
1811928220163899392 |