Replication Data for: A Computational Protocol for VCD spectra of Cyclic Peptides
This dataset contains output files for a conformational search (CREST 2.8), optimized geometries, frequencies and Vibrational Circular Dichroism (VCD) properties (Gaussian 16 Rev. B.01) for the seven molecules cyclo(Ala-bAla-Ala-bAla), Cyclo(Ala-bAla-Pro-bAla), Cyclo(Pro-bAla-Pro-bAla), Cyclo(Boc-Cy...
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dataone:sha256:02553260786a137d79e29e0b4818117cf0bb9afc75e821b3fa7887ff8666433f 2024-06-03T18:47:06+00:00 Replication Data for: A Computational Protocol for VCD spectra of Cyclic Peptides Eikås, Karolina Di Remigio Ruud, Kenneth Beerepoot, Maarten T. P. 2022-04-29T00:00:00Z https://search.dataone.org/view/sha256:02553260786a137d79e29e0b4818117cf0bb9afc75e821b3fa7887ff8666433f unknown Vibrational Circular Dichroism Chiroptical Spectroscopy Conformational search Chemistry Cyclic Peptides Dataset 2022 dataone:urn:node:DVNO 2024-06-03T18:18:20Z This dataset contains output files for a conformational search (CREST 2.8), optimized geometries, frequencies and Vibrational Circular Dichroism (VCD) properties (Gaussian 16 Rev. B.01) for the seven molecules cyclo(Ala-bAla-Ala-bAla), Cyclo(Ala-bAla-Pro-bAla), Cyclo(Pro-bAla-Pro-bAla), Cyclo(Boc-Cys-Pro-Gly-Cys-OMe), Cyclo(Boc-Cys-Pro-L-Leu-Cys-OMe), Cyclo(Boc-Cys-Pro-R-Leu-Cys-OMe) and Cyclo(Phe-D-Pro-Gly-Arg-Gly-Asp). The conformational search is done with CREST while the rest is done with GAUSSIAN 16. For more information about the computational protocols used to generate the data, please see the journal article. For Cyclo(Boc-Cys-Pro-R-Leu-Cys-OMe) the geometry of the transition state between conformers is identified with a NEB-TS calculations using the ORCA 5.0 software, while the frequencies and energies are calculated with Gaussian 16 Rev. B.01. Some of the zip files are large and we recommend to download with URL, see \"Download via URL\" here: https://guides.dataverse.org/en/5.6/user/find-use-data.html#downloading-via-url Dataset Orca Unknown Bala ENVELOPE(132.817,132.817,67.178,67.178) |
institution |
Open Polar |
collection |
Unknown |
op_collection_id |
dataone:urn:node:DVNO |
language |
unknown |
topic |
Vibrational Circular Dichroism Chiroptical Spectroscopy Conformational search Chemistry Cyclic Peptides |
spellingShingle |
Vibrational Circular Dichroism Chiroptical Spectroscopy Conformational search Chemistry Cyclic Peptides Eikås, Karolina Di Remigio Ruud, Kenneth Beerepoot, Maarten T. P. Replication Data for: A Computational Protocol for VCD spectra of Cyclic Peptides |
topic_facet |
Vibrational Circular Dichroism Chiroptical Spectroscopy Conformational search Chemistry Cyclic Peptides |
description |
This dataset contains output files for a conformational search (CREST 2.8), optimized geometries, frequencies and Vibrational Circular Dichroism (VCD) properties (Gaussian 16 Rev. B.01) for the seven molecules cyclo(Ala-bAla-Ala-bAla), Cyclo(Ala-bAla-Pro-bAla), Cyclo(Pro-bAla-Pro-bAla), Cyclo(Boc-Cys-Pro-Gly-Cys-OMe), Cyclo(Boc-Cys-Pro-L-Leu-Cys-OMe), Cyclo(Boc-Cys-Pro-R-Leu-Cys-OMe) and Cyclo(Phe-D-Pro-Gly-Arg-Gly-Asp). The conformational search is done with CREST while the rest is done with GAUSSIAN 16. For more information about the computational protocols used to generate the data, please see the journal article. For Cyclo(Boc-Cys-Pro-R-Leu-Cys-OMe) the geometry of the transition state between conformers is identified with a NEB-TS calculations using the ORCA 5.0 software, while the frequencies and energies are calculated with Gaussian 16 Rev. B.01. Some of the zip files are large and we recommend to download with URL, see \"Download via URL\" here: https://guides.dataverse.org/en/5.6/user/find-use-data.html#downloading-via-url |
format |
Dataset |
author |
Eikås, Karolina Di Remigio Ruud, Kenneth Beerepoot, Maarten T. P. |
author_facet |
Eikås, Karolina Di Remigio Ruud, Kenneth Beerepoot, Maarten T. P. |
author_sort |
Eikås, Karolina Di Remigio |
title |
Replication Data for: A Computational Protocol for VCD spectra of Cyclic Peptides |
title_short |
Replication Data for: A Computational Protocol for VCD spectra of Cyclic Peptides |
title_full |
Replication Data for: A Computational Protocol for VCD spectra of Cyclic Peptides |
title_fullStr |
Replication Data for: A Computational Protocol for VCD spectra of Cyclic Peptides |
title_full_unstemmed |
Replication Data for: A Computational Protocol for VCD spectra of Cyclic Peptides |
title_sort |
replication data for: a computational protocol for vcd spectra of cyclic peptides |
publishDate |
2022 |
url |
https://search.dataone.org/view/sha256:02553260786a137d79e29e0b4818117cf0bb9afc75e821b3fa7887ff8666433f |
long_lat |
ENVELOPE(132.817,132.817,67.178,67.178) |
geographic |
Bala |
geographic_facet |
Bala |
genre |
Orca |
genre_facet |
Orca |
_version_ |
1800876097044217856 |