Replication Data for: A Computational Protocol for VCD spectra of Cyclic Peptides

This dataset contains output files for a conformational search (CREST 2.8), optimized geometries, frequencies and Vibrational Circular Dichroism (VCD) properties (Gaussian 16 Rev. B.01) for the seven molecules cyclo(Ala-bAla-Ala-bAla), Cyclo(Ala-bAla-Pro-bAla), Cyclo(Pro-bAla-Pro-bAla), Cyclo(Boc-Cy...

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Bibliographic Details
Main Authors: Eikås, Karolina Di Remigio, Ruud, Kenneth, Beerepoot, Maarten T. P.
Format: Dataset
Language:unknown
Published: 2022
Subjects:
Online Access:https://search.dataone.org/view/sha256:02553260786a137d79e29e0b4818117cf0bb9afc75e821b3fa7887ff8666433f
id dataone:sha256:02553260786a137d79e29e0b4818117cf0bb9afc75e821b3fa7887ff8666433f
record_format openpolar
spelling dataone:sha256:02553260786a137d79e29e0b4818117cf0bb9afc75e821b3fa7887ff8666433f 2024-06-03T18:47:06+00:00 Replication Data for: A Computational Protocol for VCD spectra of Cyclic Peptides Eikås, Karolina Di Remigio Ruud, Kenneth Beerepoot, Maarten T. P. 2022-04-29T00:00:00Z https://search.dataone.org/view/sha256:02553260786a137d79e29e0b4818117cf0bb9afc75e821b3fa7887ff8666433f unknown Vibrational Circular Dichroism Chiroptical Spectroscopy Conformational search Chemistry Cyclic Peptides Dataset 2022 dataone:urn:node:DVNO 2024-06-03T18:18:20Z This dataset contains output files for a conformational search (CREST 2.8), optimized geometries, frequencies and Vibrational Circular Dichroism (VCD) properties (Gaussian 16 Rev. B.01) for the seven molecules cyclo(Ala-bAla-Ala-bAla), Cyclo(Ala-bAla-Pro-bAla), Cyclo(Pro-bAla-Pro-bAla), Cyclo(Boc-Cys-Pro-Gly-Cys-OMe), Cyclo(Boc-Cys-Pro-L-Leu-Cys-OMe), Cyclo(Boc-Cys-Pro-R-Leu-Cys-OMe) and Cyclo(Phe-D-Pro-Gly-Arg-Gly-Asp). The conformational search is done with CREST while the rest is done with GAUSSIAN 16. For more information about the computational protocols used to generate the data, please see the journal article. For Cyclo(Boc-Cys-Pro-R-Leu-Cys-OMe) the geometry of the transition state between conformers is identified with a NEB-TS calculations using the ORCA 5.0 software, while the frequencies and energies are calculated with Gaussian 16 Rev. B.01. Some of the zip files are large and we recommend to download with URL, see \"Download via URL\" here: https://guides.dataverse.org/en/5.6/user/find-use-data.html#downloading-via-url Dataset Orca Unknown Bala ENVELOPE(132.817,132.817,67.178,67.178)
institution Open Polar
collection Unknown
op_collection_id dataone:urn:node:DVNO
language unknown
topic Vibrational Circular Dichroism
Chiroptical Spectroscopy
Conformational search
Chemistry
Cyclic Peptides
spellingShingle Vibrational Circular Dichroism
Chiroptical Spectroscopy
Conformational search
Chemistry
Cyclic Peptides
Eikås, Karolina Di Remigio
Ruud, Kenneth
Beerepoot, Maarten T. P.
Replication Data for: A Computational Protocol for VCD spectra of Cyclic Peptides
topic_facet Vibrational Circular Dichroism
Chiroptical Spectroscopy
Conformational search
Chemistry
Cyclic Peptides
description This dataset contains output files for a conformational search (CREST 2.8), optimized geometries, frequencies and Vibrational Circular Dichroism (VCD) properties (Gaussian 16 Rev. B.01) for the seven molecules cyclo(Ala-bAla-Ala-bAla), Cyclo(Ala-bAla-Pro-bAla), Cyclo(Pro-bAla-Pro-bAla), Cyclo(Boc-Cys-Pro-Gly-Cys-OMe), Cyclo(Boc-Cys-Pro-L-Leu-Cys-OMe), Cyclo(Boc-Cys-Pro-R-Leu-Cys-OMe) and Cyclo(Phe-D-Pro-Gly-Arg-Gly-Asp). The conformational search is done with CREST while the rest is done with GAUSSIAN 16. For more information about the computational protocols used to generate the data, please see the journal article. For Cyclo(Boc-Cys-Pro-R-Leu-Cys-OMe) the geometry of the transition state between conformers is identified with a NEB-TS calculations using the ORCA 5.0 software, while the frequencies and energies are calculated with Gaussian 16 Rev. B.01. Some of the zip files are large and we recommend to download with URL, see \"Download via URL\" here: https://guides.dataverse.org/en/5.6/user/find-use-data.html#downloading-via-url
format Dataset
author Eikås, Karolina Di Remigio
Ruud, Kenneth
Beerepoot, Maarten T. P.
author_facet Eikås, Karolina Di Remigio
Ruud, Kenneth
Beerepoot, Maarten T. P.
author_sort Eikås, Karolina Di Remigio
title Replication Data for: A Computational Protocol for VCD spectra of Cyclic Peptides
title_short Replication Data for: A Computational Protocol for VCD spectra of Cyclic Peptides
title_full Replication Data for: A Computational Protocol for VCD spectra of Cyclic Peptides
title_fullStr Replication Data for: A Computational Protocol for VCD spectra of Cyclic Peptides
title_full_unstemmed Replication Data for: A Computational Protocol for VCD spectra of Cyclic Peptides
title_sort replication data for: a computational protocol for vcd spectra of cyclic peptides
publishDate 2022
url https://search.dataone.org/view/sha256:02553260786a137d79e29e0b4818117cf0bb9afc75e821b3fa7887ff8666433f
long_lat ENVELOPE(132.817,132.817,67.178,67.178)
geographic Bala
geographic_facet Bala
genre Orca
genre_facet Orca
_version_ 1800876097044217856