Metacommunity simulations for diatom assemblages residing in benthic cyanobacterial mats in Fryxell Basin in Taylor Valley in the McMurdo Dry Valleys, Antarctica

Here, we use MCSim, a spatially explicit metacommunity simulation package for R, to test alternative hypotheses about the roles of dispersal and species sorting in maintaining the biodiversity of diatom assemblages residing in black and orange mats in Fryxell Basin in Taylor Valley in the McMurdo Dr...

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Main Authors: Eric R Sokol, J E Barrett, Tyler J Kohler, Diane M McKnight, Mark R Salvatore, Lee F Stanish
Format: Dataset
Language:unknown
Published: Environmental Data Initiative 2020
Subjects:
Online Access:https://pasta.lternet.edu/package/metadata/eml/edi/597/2
id dataone:https://pasta.lternet.edu/package/metadata/eml/edi/597/2
record_format openpolar
spelling dataone:https://pasta.lternet.edu/package/metadata/eml/edi/597/2 2024-06-03T18:46:23+00:00 Metacommunity simulations for diatom assemblages residing in benthic cyanobacterial mats in Fryxell Basin in Taylor Valley in the McMurdo Dry Valleys, Antarctica Eric R Sokol J E Barrett Tyler J Kohler Diane M McKnight Mark R Salvatore Lee F Stanish Fryxell Basin in Taylor Valley in the McMurdo Dry Valleys in Antarctica ENVELOPE(162.84685,163.48752,-77.56842,-77.67902) BEGINDATE: 1994-01-08T00:00:00Z ENDDATE: 2015-01-15T00:00:00Z 2020-09-03T00:00:00Z https://pasta.lternet.edu/package/metadata/eml/edi/597/2 unknown Environmental Data Initiative Antarctica McMurdo Dry Valleys LTER Taylor Valley Fryxell Basin Monte Carlo simulation diatom cyanobacteria mats biodiversity Dataset 2020 dataone:urn:node:EDI 2024-06-03T18:16:43Z Here, we use MCSim, a spatially explicit metacommunity simulation package for R, to test alternative hypotheses about the roles of dispersal and species sorting in maintaining the biodiversity of diatom assemblages residing in black and orange mats in Fryxell Basin in Taylor Valley in the McMurdo Dry Valleys of Antarctica. The spatial distribution and patchiness of cyanobacterial mat habitats was characterized by remote imagery of the Lake Fryxell sub-catchment in Taylor Valley collected in January 2015. The available species pool for diatom metacommunity simulation scenarios was informed by the Antarctic Freshwater Diatoms Database, maintained by the McMurdo Dry Valleys Long Term Ecological Research program, representing samples collected between January 1994 and January 2013. We used simulation outcomes to test the plausibility of alternative community assembly hypotheses to explain empirically observed patterns of freshwater diatom biodiversity in the long-term record. The most plausible simulation scenarios suggest species sorting by environmental filters, alone, was not sufficient to maintain biodiversity in the Fryxell Basin diatom metacommunity. The most plausible scenarios included either (1) neutral models with different immigration rates for diatoms in orange and black mats or (2) species sorting by a relatively weak environmental filter, such that dispersal dynamics also influenced diatom community assembly, but there was not such a strong disparity in immigration rates between mat types. The results point to the importance of dispersal for understanding current and future biodiversity patterns for diatoms in this ecosystem, and more generally, provide further evidence that metacommunity theory is a useful framework for testing hypotheses about microbial community assembly. This dataset supports the paper: Sokol, E. Et al, 2020. Evaluating Alternative Metacommunity Hypotheses for Diatoms in the McMurdo Dry Valleys Using Simulations and Remote Sensing Data. Frontiers in Ecology and Evolution. DOI: 10.3389/fevo.2020.521668. The dataset contains four objects: a) the results of the simulation (zipped as one file), b) a manifest describing the contents of that zip file, c) a release of the MCSim model (R code), and d) ancillary inputs and code (zipped). Dataset Antarc* Antarctic Antarctica McMurdo Dry Valleys Environmental Data Initiative (via DataONE) Antarctic Fryxell ENVELOPE(163.183,163.183,-77.617,-77.617) Lake Fryxell ENVELOPE(163.183,163.183,-77.617,-77.617) McMurdo Dry Valleys Taylor Valley ENVELOPE(163.000,163.000,-77.617,-77.617) The Antarctic ENVELOPE(162.84685,163.48752,-77.56842,-77.67902)
institution Open Polar
collection Environmental Data Initiative (via DataONE)
op_collection_id dataone:urn:node:EDI
language unknown
topic Antarctica
McMurdo Dry Valleys LTER
Taylor Valley
Fryxell Basin
Monte Carlo simulation
diatom
cyanobacteria mats
biodiversity
spellingShingle Antarctica
McMurdo Dry Valleys LTER
Taylor Valley
Fryxell Basin
Monte Carlo simulation
diatom
cyanobacteria mats
biodiversity
Eric R Sokol
J E Barrett
Tyler J Kohler
Diane M McKnight
Mark R Salvatore
Lee F Stanish
Metacommunity simulations for diatom assemblages residing in benthic cyanobacterial mats in Fryxell Basin in Taylor Valley in the McMurdo Dry Valleys, Antarctica
topic_facet Antarctica
McMurdo Dry Valleys LTER
Taylor Valley
Fryxell Basin
Monte Carlo simulation
diatom
cyanobacteria mats
biodiversity
description Here, we use MCSim, a spatially explicit metacommunity simulation package for R, to test alternative hypotheses about the roles of dispersal and species sorting in maintaining the biodiversity of diatom assemblages residing in black and orange mats in Fryxell Basin in Taylor Valley in the McMurdo Dry Valleys of Antarctica. The spatial distribution and patchiness of cyanobacterial mat habitats was characterized by remote imagery of the Lake Fryxell sub-catchment in Taylor Valley collected in January 2015. The available species pool for diatom metacommunity simulation scenarios was informed by the Antarctic Freshwater Diatoms Database, maintained by the McMurdo Dry Valleys Long Term Ecological Research program, representing samples collected between January 1994 and January 2013. We used simulation outcomes to test the plausibility of alternative community assembly hypotheses to explain empirically observed patterns of freshwater diatom biodiversity in the long-term record. The most plausible simulation scenarios suggest species sorting by environmental filters, alone, was not sufficient to maintain biodiversity in the Fryxell Basin diatom metacommunity. The most plausible scenarios included either (1) neutral models with different immigration rates for diatoms in orange and black mats or (2) species sorting by a relatively weak environmental filter, such that dispersal dynamics also influenced diatom community assembly, but there was not such a strong disparity in immigration rates between mat types. The results point to the importance of dispersal for understanding current and future biodiversity patterns for diatoms in this ecosystem, and more generally, provide further evidence that metacommunity theory is a useful framework for testing hypotheses about microbial community assembly. This dataset supports the paper: Sokol, E. Et al, 2020. Evaluating Alternative Metacommunity Hypotheses for Diatoms in the McMurdo Dry Valleys Using Simulations and Remote Sensing Data. Frontiers in Ecology and Evolution. DOI: 10.3389/fevo.2020.521668. The dataset contains four objects: a) the results of the simulation (zipped as one file), b) a manifest describing the contents of that zip file, c) a release of the MCSim model (R code), and d) ancillary inputs and code (zipped).
format Dataset
author Eric R Sokol
J E Barrett
Tyler J Kohler
Diane M McKnight
Mark R Salvatore
Lee F Stanish
author_facet Eric R Sokol
J E Barrett
Tyler J Kohler
Diane M McKnight
Mark R Salvatore
Lee F Stanish
author_sort Eric R Sokol
title Metacommunity simulations for diatom assemblages residing in benthic cyanobacterial mats in Fryxell Basin in Taylor Valley in the McMurdo Dry Valleys, Antarctica
title_short Metacommunity simulations for diatom assemblages residing in benthic cyanobacterial mats in Fryxell Basin in Taylor Valley in the McMurdo Dry Valleys, Antarctica
title_full Metacommunity simulations for diatom assemblages residing in benthic cyanobacterial mats in Fryxell Basin in Taylor Valley in the McMurdo Dry Valleys, Antarctica
title_fullStr Metacommunity simulations for diatom assemblages residing in benthic cyanobacterial mats in Fryxell Basin in Taylor Valley in the McMurdo Dry Valleys, Antarctica
title_full_unstemmed Metacommunity simulations for diatom assemblages residing in benthic cyanobacterial mats in Fryxell Basin in Taylor Valley in the McMurdo Dry Valleys, Antarctica
title_sort metacommunity simulations for diatom assemblages residing in benthic cyanobacterial mats in fryxell basin in taylor valley in the mcmurdo dry valleys, antarctica
publisher Environmental Data Initiative
publishDate 2020
url https://pasta.lternet.edu/package/metadata/eml/edi/597/2
op_coverage Fryxell Basin in Taylor Valley in the McMurdo Dry Valleys in Antarctica
ENVELOPE(162.84685,163.48752,-77.56842,-77.67902)
BEGINDATE: 1994-01-08T00:00:00Z ENDDATE: 2015-01-15T00:00:00Z
long_lat ENVELOPE(163.183,163.183,-77.617,-77.617)
ENVELOPE(163.183,163.183,-77.617,-77.617)
ENVELOPE(163.000,163.000,-77.617,-77.617)
ENVELOPE(162.84685,163.48752,-77.56842,-77.67902)
geographic Antarctic
Fryxell
Lake Fryxell
McMurdo Dry Valleys
Taylor Valley
The Antarctic
geographic_facet Antarctic
Fryxell
Lake Fryxell
McMurdo Dry Valleys
Taylor Valley
The Antarctic
genre Antarc*
Antarctic
Antarctica
McMurdo Dry Valleys
genre_facet Antarc*
Antarctic
Antarctica
McMurdo Dry Valleys
_version_ 1800871907439935488