Hysteretic temperature sensitivity of wetland CH4 fluxes explained by substrate availability and microbial activity: Model Archive

This Modeling Archive is in support of an NGEE Arctic publication "Hysteretic temperature sensitivity of wetland CH4 fluxes explained by substrate availability and microbial activity" in the Journal Biogeosciences (https://doi.org/10.5194/bg-17-5849-2020), which includes the model data use...

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Main Authors: Kuang-Yu Chang, William Riley
Format: Dataset
Language:unknown
Published: ESS-DIVE: Deep Insight for Earth Science Data 2020
Subjects:
Online Access:https://search.dataone.org/view/ess-dive-5b8abb758665549-20230424T155746873
id dataone:ess-dive-5b8abb758665549-20230424T155746873
record_format openpolar
spelling dataone:ess-dive-5b8abb758665549-20230424T155746873 2024-10-03T18:45:43+00:00 Hysteretic temperature sensitivity of wetland CH4 fluxes explained by substrate availability and microbial activity: Model Archive Kuang-Yu Chang William Riley PanArctic ENVELOPE(-180.0,180.0,90.0,50.0) 2020-11-19T00:00:00Z https://search.dataone.org/view/ess-dive-5b8abb758665549-20230424T155746873 unknown ESS-DIVE: Deep Insight for Earth Science Data Methane cycling EARTH SCIENCE > BIOSPHERE > ECOLOGICAL DYNAMICS Microbial dynamics EARTH SCIENCE > CLIMATE INDICATORS > PALEOCLIMATE INDICATORS EARTH SCIENCE > ATMOSPHERE > ATMOSPHERIC CHEMISTRY Dataset 2020 dataone:urn:node:ESS_DIVE 2024-10-03T18:19:22Z This Modeling Archive is in support of an NGEE Arctic publication "Hysteretic temperature sensitivity of wetland CH4 fluxes explained by substrate availability and microbial activity" in the Journal Biogeosciences (https://doi.org/10.5194/bg-17-5849-2020), which includes the model data used in the publication. CH4 emissions from terrestrial systems are posited to increase, which can offset mitigation efforts and accelerate climate change. Yet, the accuracy of modeled CH4 emissions is sensitive to the prescribed CH4 production (or emission) temperature dependencies that are currently uncertain. Here, we use a comprehensive biogeochemistry model (ecosys) to investigate factors modulating CH4 production and emission rates across a permafrost thaw gradient encompassing a partly thawed bog and a fully thawed fen. We find that seasonally varying substrate availability drives lower and higher modeled methanogen biomass and activity, and thereby CH4 production, during the earlier and later periods of the thawed season, respectively. Package follows the Model data archiving guidelines with data in a *.zip file with three subfolders containing *.csv files and raw model output files; a data dictionary table (data_dictionary.csv) and two model output description tables (ecosys_plantspecies_output_notes.csv and ecosys_soil_ouput_notes.csv) to explain the format and meaning of individual output variables; and a user guide as a *.pdf. A detailed model description can be found in the supplement of (Grant, 2013). The ecosys source code is available at https://doi:10.5281/zenodo.3906642. The Next-Generation Ecosystem Experiments: Arctic (NGEE Arctic), was a research effort to reduce uncertainty in Earth System Models by developing a predictive understanding of carbon-rich Arctic ecosystems and feedbacks to climate. NGEE Arctic was supported by the Department of Energy's Office of Biological and Environmental Research. The NGEE Arctic project had two field research sites: 1) located within the Arctic polygonal tundra coastal region on the Barrow Environmental Observatory (BEO) and the North Slope near Utqiagvik (Barrow), Alaska and 2) multiple areas on the discontinuous permafrost region of the Seward Peninsula north of Nome, Alaska. Through observations, experiments, and synthesis with existing datasets, NGEE Arctic provided an enhanced knowledge base for multi-scale modeling and contributed to improved process representation at global pan-Arctic scales within the Department of Energy's Earth system Model (the Energy Exascale Earth System Model, or E3SM), and specifically within the E3SM Land Model component (ELM). Dataset Arctic Barrow Climate change Nome north slope permafrost Seward Peninsula Tundra Alaska ESS-DIVE: Deep Insight for Earth Science Data (via DataONE) Arctic ENVELOPE(-180.0,180.0,90.0,50.0)
institution Open Polar
collection ESS-DIVE: Deep Insight for Earth Science Data (via DataONE)
op_collection_id dataone:urn:node:ESS_DIVE
language unknown
topic Methane cycling
EARTH SCIENCE > BIOSPHERE > ECOLOGICAL DYNAMICS
Microbial dynamics
EARTH SCIENCE > CLIMATE INDICATORS > PALEOCLIMATE INDICATORS
EARTH SCIENCE > ATMOSPHERE > ATMOSPHERIC CHEMISTRY
spellingShingle Methane cycling
EARTH SCIENCE > BIOSPHERE > ECOLOGICAL DYNAMICS
Microbial dynamics
EARTH SCIENCE > CLIMATE INDICATORS > PALEOCLIMATE INDICATORS
EARTH SCIENCE > ATMOSPHERE > ATMOSPHERIC CHEMISTRY
Kuang-Yu Chang
William Riley
Hysteretic temperature sensitivity of wetland CH4 fluxes explained by substrate availability and microbial activity: Model Archive
topic_facet Methane cycling
EARTH SCIENCE > BIOSPHERE > ECOLOGICAL DYNAMICS
Microbial dynamics
EARTH SCIENCE > CLIMATE INDICATORS > PALEOCLIMATE INDICATORS
EARTH SCIENCE > ATMOSPHERE > ATMOSPHERIC CHEMISTRY
description This Modeling Archive is in support of an NGEE Arctic publication "Hysteretic temperature sensitivity of wetland CH4 fluxes explained by substrate availability and microbial activity" in the Journal Biogeosciences (https://doi.org/10.5194/bg-17-5849-2020), which includes the model data used in the publication. CH4 emissions from terrestrial systems are posited to increase, which can offset mitigation efforts and accelerate climate change. Yet, the accuracy of modeled CH4 emissions is sensitive to the prescribed CH4 production (or emission) temperature dependencies that are currently uncertain. Here, we use a comprehensive biogeochemistry model (ecosys) to investigate factors modulating CH4 production and emission rates across a permafrost thaw gradient encompassing a partly thawed bog and a fully thawed fen. We find that seasonally varying substrate availability drives lower and higher modeled methanogen biomass and activity, and thereby CH4 production, during the earlier and later periods of the thawed season, respectively. Package follows the Model data archiving guidelines with data in a *.zip file with three subfolders containing *.csv files and raw model output files; a data dictionary table (data_dictionary.csv) and two model output description tables (ecosys_plantspecies_output_notes.csv and ecosys_soil_ouput_notes.csv) to explain the format and meaning of individual output variables; and a user guide as a *.pdf. A detailed model description can be found in the supplement of (Grant, 2013). The ecosys source code is available at https://doi:10.5281/zenodo.3906642. The Next-Generation Ecosystem Experiments: Arctic (NGEE Arctic), was a research effort to reduce uncertainty in Earth System Models by developing a predictive understanding of carbon-rich Arctic ecosystems and feedbacks to climate. NGEE Arctic was supported by the Department of Energy's Office of Biological and Environmental Research. The NGEE Arctic project had two field research sites: 1) located within the Arctic polygonal tundra coastal region on the Barrow Environmental Observatory (BEO) and the North Slope near Utqiagvik (Barrow), Alaska and 2) multiple areas on the discontinuous permafrost region of the Seward Peninsula north of Nome, Alaska. Through observations, experiments, and synthesis with existing datasets, NGEE Arctic provided an enhanced knowledge base for multi-scale modeling and contributed to improved process representation at global pan-Arctic scales within the Department of Energy's Earth system Model (the Energy Exascale Earth System Model, or E3SM), and specifically within the E3SM Land Model component (ELM).
format Dataset
author Kuang-Yu Chang
William Riley
author_facet Kuang-Yu Chang
William Riley
author_sort Kuang-Yu Chang
title Hysteretic temperature sensitivity of wetland CH4 fluxes explained by substrate availability and microbial activity: Model Archive
title_short Hysteretic temperature sensitivity of wetland CH4 fluxes explained by substrate availability and microbial activity: Model Archive
title_full Hysteretic temperature sensitivity of wetland CH4 fluxes explained by substrate availability and microbial activity: Model Archive
title_fullStr Hysteretic temperature sensitivity of wetland CH4 fluxes explained by substrate availability and microbial activity: Model Archive
title_full_unstemmed Hysteretic temperature sensitivity of wetland CH4 fluxes explained by substrate availability and microbial activity: Model Archive
title_sort hysteretic temperature sensitivity of wetland ch4 fluxes explained by substrate availability and microbial activity: model archive
publisher ESS-DIVE: Deep Insight for Earth Science Data
publishDate 2020
url https://search.dataone.org/view/ess-dive-5b8abb758665549-20230424T155746873
op_coverage PanArctic
ENVELOPE(-180.0,180.0,90.0,50.0)
long_lat ENVELOPE(-180.0,180.0,90.0,50.0)
geographic Arctic
geographic_facet Arctic
genre Arctic
Barrow
Climate change
Nome
north slope
permafrost
Seward Peninsula
Tundra
Alaska
genre_facet Arctic
Barrow
Climate change
Nome
north slope
permafrost
Seward Peninsula
Tundra
Alaska
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