Sediment chemical data, Lake Hazen, Nunavut, Canada, August 4th to 8th, 2016

This data on porewater chemical concentrations of NH 4 + , NO 2 - /NO 3 - , SO 4 2- , TDP and Cl - , and microprobe data on O 2 , redox potential, and pH in the sediments of Lake Hazen in August 2016 was gathered for a metagenomic study on the structure and functional potential of the sediment micro...

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Main Authors: Matti Ruuskanen, Graham Colby, Kyra St. Pierre, Vincent St. Louis, Stéphane Aris-Brosou, Alexandre Poulain
Format: Dataset
Language:unknown
Published: Arctic Data Center 2019
Subjects:
Online Access:https://doi.org/10.18739/A2X63B542
id dataone:doi:10.18739/A2X63B542
record_format openpolar
spelling dataone:doi:10.18739/A2X63B542 2024-06-03T18:46:34+00:00 Sediment chemical data, Lake Hazen, Nunavut, Canada, August 4th to 8th, 2016 Matti Ruuskanen Graham Colby Kyra St. Pierre Vincent St. Louis Stéphane Aris-Brosou Alexandre Poulain Lake Hazen, Nunavut, Canada, Deep Hole [261m] sampling on the 4th of August 2016 Lake Hazen, Nunavut, Canada, Snowgoose Bay [49m] sampling on the 8th of August 2016 ENVELOPE(-70.71619,-70.71619,81.82452,81.82452) BEGINDATE: 2016-08-04T00:00:00Z ENDDATE: 2016-08-08T00:00:00Z 2019-01-01T00:00:00Z https://doi.org/10.18739/A2X63B542 unknown Arctic Data Center high arctic lakes sediments Dataset 2019 dataone:urn:node:ARCTIC https://doi.org/10.18739/A2X63B542 2024-06-03T18:13:10Z This data on porewater chemical concentrations of NH 4 + , NO 2 - /NO 3 - , SO 4 2- , TDP and Cl - , and microprobe data on O 2 , redox potential, and pH in the sediments of Lake Hazen in August 2016 was gathered for a metagenomic study on the structure and functional potential of the sediment microbial community. The title of the study is "High-Arctic lake sediments are enriched in novel Metagenome Assembled Genomes fit for low temperature and oligotrophy". Abstract of the study follows: The Arctic is currently warming at an unprecedented rate, which may affect environmental constraints on the freshwater microbial communities found there. Yet, our knowledge of the community structure and function of High Arctic freshwater microbes remains poor, even though they play key roles in nutrient cycling and other ecosystem services. Here, using high-throughput metagenomic sequencing and genome assembly, we show that sediment microbial communities in the High Arctic’s largest lake by volume, Lake Hazen, are highly diverse and contain novel organisms. These assembled genomes displayed a high prevalence of pathways involved in lipid chemistry, and a low prevalence of nutrient uptake pathways, which might represent adaptations to the specific, extremely oligotrophic conditions in Lake Hazen. A third of the reconstructed genomes were distantly related to known reference genomes, and analysis of marker genes indicated that these novel genomes play key roles in fixing atmospheric nitrogen and assimilating it into organic forms. Furthermore, we observed that the nitrogen and sulfur cycles are catalyzed by a diverse microbial community in these sediments. Increasing nutrient delivery from melting glaciers might lead to disappearance of oligotrophic niches in the sediment and alterations in the microbial community, which might have unforeseen consequences on water quality in northern regions. Dataset Arctic glacier* Lake Hazen Nunavut Arctic Data Center (via DataONE) Arctic Nunavut Canada Arctic Lake ENVELOPE(-130.826,-130.826,57.231,57.231) Lake Hazen ENVELOPE(-71.017,-71.017,81.797,81.797) Snowgoose Bay ENVELOPE(-71.523,-71.523,66.569,66.569) ENVELOPE(-70.71619,-70.71619,81.82452,81.82452)
institution Open Polar
collection Arctic Data Center (via DataONE)
op_collection_id dataone:urn:node:ARCTIC
language unknown
topic high arctic
lakes
sediments
spellingShingle high arctic
lakes
sediments
Matti Ruuskanen
Graham Colby
Kyra St. Pierre
Vincent St. Louis
Stéphane Aris-Brosou
Alexandre Poulain
Sediment chemical data, Lake Hazen, Nunavut, Canada, August 4th to 8th, 2016
topic_facet high arctic
lakes
sediments
description This data on porewater chemical concentrations of NH 4 + , NO 2 - /NO 3 - , SO 4 2- , TDP and Cl - , and microprobe data on O 2 , redox potential, and pH in the sediments of Lake Hazen in August 2016 was gathered for a metagenomic study on the structure and functional potential of the sediment microbial community. The title of the study is "High-Arctic lake sediments are enriched in novel Metagenome Assembled Genomes fit for low temperature and oligotrophy". Abstract of the study follows: The Arctic is currently warming at an unprecedented rate, which may affect environmental constraints on the freshwater microbial communities found there. Yet, our knowledge of the community structure and function of High Arctic freshwater microbes remains poor, even though they play key roles in nutrient cycling and other ecosystem services. Here, using high-throughput metagenomic sequencing and genome assembly, we show that sediment microbial communities in the High Arctic’s largest lake by volume, Lake Hazen, are highly diverse and contain novel organisms. These assembled genomes displayed a high prevalence of pathways involved in lipid chemistry, and a low prevalence of nutrient uptake pathways, which might represent adaptations to the specific, extremely oligotrophic conditions in Lake Hazen. A third of the reconstructed genomes were distantly related to known reference genomes, and analysis of marker genes indicated that these novel genomes play key roles in fixing atmospheric nitrogen and assimilating it into organic forms. Furthermore, we observed that the nitrogen and sulfur cycles are catalyzed by a diverse microbial community in these sediments. Increasing nutrient delivery from melting glaciers might lead to disappearance of oligotrophic niches in the sediment and alterations in the microbial community, which might have unforeseen consequences on water quality in northern regions.
format Dataset
author Matti Ruuskanen
Graham Colby
Kyra St. Pierre
Vincent St. Louis
Stéphane Aris-Brosou
Alexandre Poulain
author_facet Matti Ruuskanen
Graham Colby
Kyra St. Pierre
Vincent St. Louis
Stéphane Aris-Brosou
Alexandre Poulain
author_sort Matti Ruuskanen
title Sediment chemical data, Lake Hazen, Nunavut, Canada, August 4th to 8th, 2016
title_short Sediment chemical data, Lake Hazen, Nunavut, Canada, August 4th to 8th, 2016
title_full Sediment chemical data, Lake Hazen, Nunavut, Canada, August 4th to 8th, 2016
title_fullStr Sediment chemical data, Lake Hazen, Nunavut, Canada, August 4th to 8th, 2016
title_full_unstemmed Sediment chemical data, Lake Hazen, Nunavut, Canada, August 4th to 8th, 2016
title_sort sediment chemical data, lake hazen, nunavut, canada, august 4th to 8th, 2016
publisher Arctic Data Center
publishDate 2019
url https://doi.org/10.18739/A2X63B542
op_coverage Lake Hazen, Nunavut, Canada, Deep Hole [261m] sampling on the 4th of August 2016
Lake Hazen, Nunavut, Canada, Snowgoose Bay [49m] sampling on the 8th of August 2016
ENVELOPE(-70.71619,-70.71619,81.82452,81.82452)
BEGINDATE: 2016-08-04T00:00:00Z ENDDATE: 2016-08-08T00:00:00Z
long_lat ENVELOPE(-130.826,-130.826,57.231,57.231)
ENVELOPE(-71.017,-71.017,81.797,81.797)
ENVELOPE(-71.523,-71.523,66.569,66.569)
ENVELOPE(-70.71619,-70.71619,81.82452,81.82452)
geographic Arctic
Nunavut
Canada
Arctic Lake
Lake Hazen
Snowgoose Bay
geographic_facet Arctic
Nunavut
Canada
Arctic Lake
Lake Hazen
Snowgoose Bay
genre Arctic
glacier*
Lake Hazen
Nunavut
genre_facet Arctic
glacier*
Lake Hazen
Nunavut
op_doi https://doi.org/10.18739/A2X63B542
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