Cold-water coral microbiomes (Lophelia pertusa) from Gulf of Mexico and Atlantic Ocean: raw data

The files in this data release are the raw deoxyribonucleic acid (DNA) sequence files referenced in the submitted journal article by Christina A. Kellogg, Dawn B. Goldsmith and Michael A. Gray entitled "Biogeographic comparison of Lophelia-associated bacterial communities in the western Atlanti...

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Bibliographic Details
Main Authors: Christina A. Kellogg, Dawn B. Goldsmith
Format: Dataset
Language:unknown
Published: USGS Science Data Catalog 2017
Subjects:
Online Access:https://search.dataone.org/view/8d325a48-1e5b-4856-9cfb-ca2112239329
id dataone:8d325a48-1e5b-4856-9cfb-ca2112239329
record_format openpolar
spelling dataone:8d325a48-1e5b-4856-9cfb-ca2112239329 2024-10-03T18:46:13+00:00 Cold-water coral microbiomes (Lophelia pertusa) from Gulf of Mexico and Atlantic Ocean: raw data Christina A. Kellogg Dawn B. Goldsmith ENVELOPE(88.37964,79.61613,29.17027,26.197992) BEGINDATE: 2009-01-01T00:00:00Z ENDDATE: 2010-01-01T00:00:00Z 2017-03-21T00:00:00Z https://search.dataone.org/view/8d325a48-1e5b-4856-9cfb-ca2112239329 unknown USGS Science Data Catalog biota oceans Biological Classification < Bacteria Biological Classification < Animals < Cnidarians marine biology marine geology coelenterates Atlantic Ocean Gulf of Mexico Dataset 2017 dataone:urn:node:USGS_SDC 2024-10-03T18:10:40Z The files in this data release are the raw deoxyribonucleic acid (DNA) sequence files referenced in the submitted journal article by Christina A. Kellogg, Dawn B. Goldsmith and Michael A. Gray entitled "Biogeographic comparison of Lophelia-associated bacterial communities in the western Atlantic reveals conserved core microbiome". They represent a 16S ribosomal ribonucleic acid (rRNA) gene amplicon survey of the coral’s microbiomes completed using Roche 454 pyrosequencing with Titanium series reagents. Samples from the Gulf of Mexico were collected in 2009 and 2010. Samples from the Atlantic Ocean were collected in 2009. The raw data files associated with this study have also been submitted to the National Center for Biotechnology Information (NCBI) Sequence Read Archive (SRA) under Bioproject number PRJNA305617. Minimum information about a marker gene (MIMARKS) compliant metadata is provided in "Lophelia metadata", which is included in the data download file. For more information, please contact Christina Kellogg at the U.S. Geological Survey (USGS) St. Petersburg Coastal and Marine Science Center, 600 4th Street South, St. Petersburg, Florida, USA, 33701; Telephone: (727) 502-8128; email: ckellogg@usgs.gov. Dataset Lophelia pertusa USGS Science Data Catalog (via DataONE) ENVELOPE(88.37964,79.61613,29.17027,26.197992)
institution Open Polar
collection USGS Science Data Catalog (via DataONE)
op_collection_id dataone:urn:node:USGS_SDC
language unknown
topic biota
oceans
Biological Classification < Bacteria
Biological Classification < Animals < Cnidarians
marine biology
marine geology
coelenterates
Atlantic Ocean
Gulf of Mexico
spellingShingle biota
oceans
Biological Classification < Bacteria
Biological Classification < Animals < Cnidarians
marine biology
marine geology
coelenterates
Atlantic Ocean
Gulf of Mexico
Christina A. Kellogg
Dawn B. Goldsmith
Cold-water coral microbiomes (Lophelia pertusa) from Gulf of Mexico and Atlantic Ocean: raw data
topic_facet biota
oceans
Biological Classification < Bacteria
Biological Classification < Animals < Cnidarians
marine biology
marine geology
coelenterates
Atlantic Ocean
Gulf of Mexico
description The files in this data release are the raw deoxyribonucleic acid (DNA) sequence files referenced in the submitted journal article by Christina A. Kellogg, Dawn B. Goldsmith and Michael A. Gray entitled "Biogeographic comparison of Lophelia-associated bacterial communities in the western Atlantic reveals conserved core microbiome". They represent a 16S ribosomal ribonucleic acid (rRNA) gene amplicon survey of the coral’s microbiomes completed using Roche 454 pyrosequencing with Titanium series reagents. Samples from the Gulf of Mexico were collected in 2009 and 2010. Samples from the Atlantic Ocean were collected in 2009. The raw data files associated with this study have also been submitted to the National Center for Biotechnology Information (NCBI) Sequence Read Archive (SRA) under Bioproject number PRJNA305617. Minimum information about a marker gene (MIMARKS) compliant metadata is provided in "Lophelia metadata", which is included in the data download file. For more information, please contact Christina Kellogg at the U.S. Geological Survey (USGS) St. Petersburg Coastal and Marine Science Center, 600 4th Street South, St. Petersburg, Florida, USA, 33701; Telephone: (727) 502-8128; email: ckellogg@usgs.gov.
format Dataset
author Christina A. Kellogg
Dawn B. Goldsmith
author_facet Christina A. Kellogg
Dawn B. Goldsmith
author_sort Christina A. Kellogg
title Cold-water coral microbiomes (Lophelia pertusa) from Gulf of Mexico and Atlantic Ocean: raw data
title_short Cold-water coral microbiomes (Lophelia pertusa) from Gulf of Mexico and Atlantic Ocean: raw data
title_full Cold-water coral microbiomes (Lophelia pertusa) from Gulf of Mexico and Atlantic Ocean: raw data
title_fullStr Cold-water coral microbiomes (Lophelia pertusa) from Gulf of Mexico and Atlantic Ocean: raw data
title_full_unstemmed Cold-water coral microbiomes (Lophelia pertusa) from Gulf of Mexico and Atlantic Ocean: raw data
title_sort cold-water coral microbiomes (lophelia pertusa) from gulf of mexico and atlantic ocean: raw data
publisher USGS Science Data Catalog
publishDate 2017
url https://search.dataone.org/view/8d325a48-1e5b-4856-9cfb-ca2112239329
op_coverage ENVELOPE(88.37964,79.61613,29.17027,26.197992)
BEGINDATE: 2009-01-01T00:00:00Z ENDDATE: 2010-01-01T00:00:00Z
long_lat ENVELOPE(88.37964,79.61613,29.17027,26.197992)
genre Lophelia pertusa
genre_facet Lophelia pertusa
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