Improving Assessments of North Pacific Crab Stocks through Enhanced Modelling of Growth

Stock assessment methods for many invertebrate stocks, including crab stocks in the Bering Sea of Alaska, rely on size-structured population dynamics models. A key component of these models is the size-transition matrix, which specifies the probability of growing from one sizeclass to another after...

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Main Author: Andre Punt
Format: Dataset
Language:unknown
Published: Research Workspace 2016
Subjects:
Online Access:https://search.dataone.org/view/10.24431_rw1k5aa_20210709T210913Z
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spelling dataone:10.24431_rw1k5aa_20210709T210913Z 2024-10-03T18:46:01+00:00 Improving Assessments of North Pacific Crab Stocks through Enhanced Modelling of Growth Andre Punt 2016-07-01T00:00:00Z https://search.dataone.org/view/10.24431_rw1k5aa_20210709T210913Z unknown Research Workspace Lithodes aequispinus golden king crab North Pacific Research Board Dataset 2016 dataone:urn:node:RW 2024-10-03T18:17:25Z Stock assessment methods for many invertebrate stocks, including crab stocks in the Bering Sea of Alaska, rely on size-structured population dynamics models. A key component of these models is the size-transition matrix, which specifies the probability of growing from one sizeclass to another after a certain period of time. This project developed an approach for computing size-transition matrices that explicitly allows for individual variation in growth. The approach has been coded and a method identified for estimating the parameters of the sizetransition matrix using maximum likelihood. Three variants of this new approach have been included in the Generalized Modeling for Alaskan Crab Stocks (GMACS) package. This approach for constructing size-transition matrices assumes growth parameters differ among individuals. Other approaches such as the ‘traditional’ and ‘platoon’ method, make different assumptions regarding growth variability. Simulation tests compared the ability of these approaches to estimate size-transition matrices for scenarios similar to those related to conducting assessments for golden king crab in the Aleutian Islands region of Alaska. The simulations explored the effects of whether growth differs among individuals and the data available. Data were used from Alaska Department of Fish and Game between 1991 and 2006. No estimation method performed best for all scenarios examined. Importantly, the number of size-classes in the size-transition matrix and how the tag-release data used for parameter estimation were collected heavily dictate performance. The numerical integration method that allows L∞ to vary among individuals and smaller size-classes in the assessment were found to be preferred. The Gmacs package can be downloaded from the following Github website: https://github.com/seacode/gmacs. Dataset Bering Sea Golden King Crab Lithodes aequispinus Alaska Aleutian Islands Research Workspace (via DataONE) Bering Sea Pacific
institution Open Polar
collection Research Workspace (via DataONE)
op_collection_id dataone:urn:node:RW
language unknown
topic Lithodes aequispinus
golden king crab
North Pacific Research Board
spellingShingle Lithodes aequispinus
golden king crab
North Pacific Research Board
Andre Punt
Improving Assessments of North Pacific Crab Stocks through Enhanced Modelling of Growth
topic_facet Lithodes aequispinus
golden king crab
North Pacific Research Board
description Stock assessment methods for many invertebrate stocks, including crab stocks in the Bering Sea of Alaska, rely on size-structured population dynamics models. A key component of these models is the size-transition matrix, which specifies the probability of growing from one sizeclass to another after a certain period of time. This project developed an approach for computing size-transition matrices that explicitly allows for individual variation in growth. The approach has been coded and a method identified for estimating the parameters of the sizetransition matrix using maximum likelihood. Three variants of this new approach have been included in the Generalized Modeling for Alaskan Crab Stocks (GMACS) package. This approach for constructing size-transition matrices assumes growth parameters differ among individuals. Other approaches such as the ‘traditional’ and ‘platoon’ method, make different assumptions regarding growth variability. Simulation tests compared the ability of these approaches to estimate size-transition matrices for scenarios similar to those related to conducting assessments for golden king crab in the Aleutian Islands region of Alaska. The simulations explored the effects of whether growth differs among individuals and the data available. Data were used from Alaska Department of Fish and Game between 1991 and 2006. No estimation method performed best for all scenarios examined. Importantly, the number of size-classes in the size-transition matrix and how the tag-release data used for parameter estimation were collected heavily dictate performance. The numerical integration method that allows L∞ to vary among individuals and smaller size-classes in the assessment were found to be preferred. The Gmacs package can be downloaded from the following Github website: https://github.com/seacode/gmacs.
format Dataset
author Andre Punt
author_facet Andre Punt
author_sort Andre Punt
title Improving Assessments of North Pacific Crab Stocks through Enhanced Modelling of Growth
title_short Improving Assessments of North Pacific Crab Stocks through Enhanced Modelling of Growth
title_full Improving Assessments of North Pacific Crab Stocks through Enhanced Modelling of Growth
title_fullStr Improving Assessments of North Pacific Crab Stocks through Enhanced Modelling of Growth
title_full_unstemmed Improving Assessments of North Pacific Crab Stocks through Enhanced Modelling of Growth
title_sort improving assessments of north pacific crab stocks through enhanced modelling of growth
publisher Research Workspace
publishDate 2016
url https://search.dataone.org/view/10.24431_rw1k5aa_20210709T210913Z
geographic Bering Sea
Pacific
geographic_facet Bering Sea
Pacific
genre Bering Sea
Golden King Crab
Lithodes aequispinus
Alaska
Aleutian Islands
genre_facet Bering Sea
Golden King Crab
Lithodes aequispinus
Alaska
Aleutian Islands
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