Impacts of climate change on red king crab larval advection in Bristol Bay: implications for recruitment variability: IBM model output files

We refined a suite of hydrodynamic and individual-based models to understand how climate change may impact red king crab (Paralithodes camtschaticus) recruitment in Bristol Bay, Alaska. We coupled a biophysical individual-based model (IBM) and a Regional Ocean Modeling System (ROMS) circulation mode...

Full description

Bibliographic Details
Main Authors: Carolina Parada, Benjamin Daly
Format: Dataset
Language:unknown
Published: Research Workspace 2014
Subjects:
Online Access:https://search.dataone.org/view/10.24431_rw1k44r_2020_5_20_22133
id dataone:10.24431_rw1k44r_2020_5_20_22133
record_format openpolar
spelling dataone:10.24431_rw1k44r_2020_5_20_22133 2024-06-03T18:46:46+00:00 Impacts of climate change on red king crab larval advection in Bristol Bay: implications for recruitment variability: IBM model output files Carolina Parada Benjamin Daly ENVELOPE(186.0,204.0,61.0,51.0) BEGINDATE: 1999-01-01T09:00:00Z ENDDATE: 1999-12-31T09:00:00Z 2014-09-01T00:00:00Z https://search.dataone.org/view/10.24431_rw1k44r_2020_5_20_22133 unknown Research Workspace OCEAN > PACIFIC OCEAN > NORTH PACIFIC OCEAN > BERING SEA CONTINENT > NORTH AMERICA > UNITED STATES OF AMERICA > ALASKA Paralithodes camtschaticus red king crab forecast hindcast 2037 2005 1999 retention recruitment larval advection red king crab Bristol Bay connectivity Regional Ocean Modeling System North Pacific Research Board individual-based model larval transport larval advection larval trajectory hydrodynamic model Dataset 2014 dataone:urn:node:RW 2024-06-03T18:16:24Z We refined a suite of hydrodynamic and individual-based models to understand how climate change may impact red king crab (Paralithodes camtschaticus) recruitment in Bristol Bay, Alaska. We coupled a biophysical individual-based model (IBM) and a Regional Ocean Modeling System (ROMS) circulation model to estimate connectivity between the location of red king crab larval release and benthic settlement location in the eastern Bering Sea including Bristol Bay. We conducted ROMS hindcasts for two representative years: 1999 (cold) and 2005 (warm), and a forecast for a predicted warm year: 2037. Scientific output includes ROMS model files, IBM data files, and a red king crab habitat map. We modified an existing blue king crab (Paralithodes platypus) individual-based model (IBM) that was originally based on snow crab to represent the appropriate biology for red king crab. The biophysical model (ROMS model coupled to an IBM) used was a modified version of the ICHTHYOP modeling tool and was adapted to the Bering Sea system. Salinity, temperature, sea level, and current fields obtained from ROMS were used to force the red king crab IBM over the same time frame and spatial resolution as the physical model. The biology of the early life history stages of red king crab from larval release to settlement was represented through the following mechanisms or processes: larval abundance at release, spatial distribution of larvae at release, hatching time, vertical movement, growth, horizontal movement, post-larval settlement rules, and mortality (i.e., habitat availability). The “Connectivity” folder consists of the connectivity map, information of the connectivity map vertices, and connectivity matrices for each month/year simulation. Note that supplemental metadata can be found in the file Metadata – Matrices_ RedKing Crab.txt. The “IBM output (netcdf)” folder contains trajectory information for each particle in for each initial condition/month/year simulation. The “Initial Conditions” folder contains a map showing the particle location in the initial conditions and the lat, long, and depth information for each simulated particle. The “Settlement” folder contains maps showing particle density at release and settlement for each simulation using the habitat map grid spatial resolution. Dataset Bering Sea blue king crab Paralithodes camtschaticus Paralithodes platypus Red king crab Snow crab Alaska Research Workspace (via DataONE) Bering Sea Pacific
institution Open Polar
collection Research Workspace (via DataONE)
op_collection_id dataone:urn:node:RW
language unknown
topic OCEAN > PACIFIC OCEAN > NORTH PACIFIC OCEAN > BERING SEA
CONTINENT > NORTH AMERICA > UNITED STATES OF AMERICA > ALASKA
Paralithodes camtschaticus
red king crab
forecast
hindcast
2037
2005
1999
retention
recruitment
larval advection
red king crab
Bristol Bay
connectivity
Regional Ocean Modeling System
North Pacific Research Board
individual-based model
larval transport
larval advection
larval trajectory
hydrodynamic model
spellingShingle OCEAN > PACIFIC OCEAN > NORTH PACIFIC OCEAN > BERING SEA
CONTINENT > NORTH AMERICA > UNITED STATES OF AMERICA > ALASKA
Paralithodes camtschaticus
red king crab
forecast
hindcast
2037
2005
1999
retention
recruitment
larval advection
red king crab
Bristol Bay
connectivity
Regional Ocean Modeling System
North Pacific Research Board
individual-based model
larval transport
larval advection
larval trajectory
hydrodynamic model
Carolina Parada
Benjamin Daly
Impacts of climate change on red king crab larval advection in Bristol Bay: implications for recruitment variability: IBM model output files
topic_facet OCEAN > PACIFIC OCEAN > NORTH PACIFIC OCEAN > BERING SEA
CONTINENT > NORTH AMERICA > UNITED STATES OF AMERICA > ALASKA
Paralithodes camtschaticus
red king crab
forecast
hindcast
2037
2005
1999
retention
recruitment
larval advection
red king crab
Bristol Bay
connectivity
Regional Ocean Modeling System
North Pacific Research Board
individual-based model
larval transport
larval advection
larval trajectory
hydrodynamic model
description We refined a suite of hydrodynamic and individual-based models to understand how climate change may impact red king crab (Paralithodes camtschaticus) recruitment in Bristol Bay, Alaska. We coupled a biophysical individual-based model (IBM) and a Regional Ocean Modeling System (ROMS) circulation model to estimate connectivity between the location of red king crab larval release and benthic settlement location in the eastern Bering Sea including Bristol Bay. We conducted ROMS hindcasts for two representative years: 1999 (cold) and 2005 (warm), and a forecast for a predicted warm year: 2037. Scientific output includes ROMS model files, IBM data files, and a red king crab habitat map. We modified an existing blue king crab (Paralithodes platypus) individual-based model (IBM) that was originally based on snow crab to represent the appropriate biology for red king crab. The biophysical model (ROMS model coupled to an IBM) used was a modified version of the ICHTHYOP modeling tool and was adapted to the Bering Sea system. Salinity, temperature, sea level, and current fields obtained from ROMS were used to force the red king crab IBM over the same time frame and spatial resolution as the physical model. The biology of the early life history stages of red king crab from larval release to settlement was represented through the following mechanisms or processes: larval abundance at release, spatial distribution of larvae at release, hatching time, vertical movement, growth, horizontal movement, post-larval settlement rules, and mortality (i.e., habitat availability). The “Connectivity” folder consists of the connectivity map, information of the connectivity map vertices, and connectivity matrices for each month/year simulation. Note that supplemental metadata can be found in the file Metadata – Matrices_ RedKing Crab.txt. The “IBM output (netcdf)” folder contains trajectory information for each particle in for each initial condition/month/year simulation. The “Initial Conditions” folder contains a map showing the particle location in the initial conditions and the lat, long, and depth information for each simulated particle. The “Settlement” folder contains maps showing particle density at release and settlement for each simulation using the habitat map grid spatial resolution.
format Dataset
author Carolina Parada
Benjamin Daly
author_facet Carolina Parada
Benjamin Daly
author_sort Carolina Parada
title Impacts of climate change on red king crab larval advection in Bristol Bay: implications for recruitment variability: IBM model output files
title_short Impacts of climate change on red king crab larval advection in Bristol Bay: implications for recruitment variability: IBM model output files
title_full Impacts of climate change on red king crab larval advection in Bristol Bay: implications for recruitment variability: IBM model output files
title_fullStr Impacts of climate change on red king crab larval advection in Bristol Bay: implications for recruitment variability: IBM model output files
title_full_unstemmed Impacts of climate change on red king crab larval advection in Bristol Bay: implications for recruitment variability: IBM model output files
title_sort impacts of climate change on red king crab larval advection in bristol bay: implications for recruitment variability: ibm model output files
publisher Research Workspace
publishDate 2014
url https://search.dataone.org/view/10.24431_rw1k44r_2020_5_20_22133
op_coverage ENVELOPE(186.0,204.0,61.0,51.0)
BEGINDATE: 1999-01-01T09:00:00Z ENDDATE: 1999-12-31T09:00:00Z
geographic Bering Sea
Pacific
geographic_facet Bering Sea
Pacific
genre Bering Sea
blue king crab
Paralithodes camtschaticus
Paralithodes platypus
Red king crab
Snow crab
Alaska
genre_facet Bering Sea
blue king crab
Paralithodes camtschaticus
Paralithodes platypus
Red king crab
Snow crab
Alaska
_version_ 1800870840985714688