Phylogeography of the Arctic‐Alpine Saxifraga oppositifolia (Saxifragaceae) and some related taxa based on cpDNA and ITS sequence variation

Saxifraga oppositifolia (Saxifragaceae) is an important model system for the evolution of Arctic‐Alpine plant species. Sequences of the psb A– trn H intergenic spacer of chloroplast DNA and of the internal transcribed spacer region, ITS1–5.8S–ITS2, of the nuclear ribosomal DNA were used to investiga...

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Published in:American Journal of Botany
Main Authors: Holderegger, Rolf, Abbott, Richard J.
Other Authors: Schweizerischer Nationalfonds zur Förderung der Wissenschaftlichen Forschung
Format: Article in Journal/Newspaper
Language:English
Published: Wiley 2003
Subjects:
Online Access:http://dx.doi.org/10.3732/ajb.90.6.931
https://onlinelibrary.wiley.com/doi/full/10.3732/ajb.90.6.931
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spelling crwiley:10.3732/ajb.90.6.931 2024-09-15T18:33:56+00:00 Phylogeography of the Arctic‐Alpine Saxifraga oppositifolia (Saxifragaceae) and some related taxa based on cpDNA and ITS sequence variation Holderegger, Rolf Abbott, Richard J. Schweizerischer Nationalfonds zur Förderung der Wissenschaftlichen Forschung 2003 http://dx.doi.org/10.3732/ajb.90.6.931 https://onlinelibrary.wiley.com/doi/full/10.3732/ajb.90.6.931 en eng Wiley http://onlinelibrary.wiley.com/termsAndConditions#vor American Journal of Botany volume 90, issue 6, page 931-936 ISSN 0002-9122 1537-2197 journal-article 2003 crwiley https://doi.org/10.3732/ajb.90.6.931 2024-07-09T04:12:53Z Saxifraga oppositifolia (Saxifragaceae) is an important model system for the evolution of Arctic‐Alpine plant species. Sequences of the psb A– trn H intergenic spacer of chloroplast DNA and of the internal transcribed spacer region, ITS1–5.8S–ITS2, of the nuclear ribosomal DNA were used to investigate the intraspecific evolution and phylogeography of this species. Samples from nearly the species' entire circumpolar distribution were included in the analysis as well as samples from the closely related taxa S. smalliana from Alaska and S. blepharophylla and S. biflora from the Alps ( S. aizoides served as outgroup). These latter taxa showed a low number of parsimony informative characters, in both cpDNA and ITS sequences, which separated them from S. oppositifolia . Two main cpDNA haplotypes were detected within S. oppositifolia , one with a Eurasian distribution and one with an East Asian‐North American distribution. This confirmed the existence of two cpDNA lineages with different geographical distributions in this species, which had previously been reported based on a RFLP analysis. The ITS phylogeny was not useful with respect to the intraspecific evolution and phylogeography of S. oppositifolia , because it showed a largely unresolved topology with low statistical support. The cpDNA sequence analysis, however, also suggested a putative long‐distance dispersal event. All investigated taxa had cpDNA haplotypes that were congruent with their geographical origin rather than their phylogeny. This could point to putative lineage sorting in S. oppositifolia and related taxa. Article in Journal/Newspaper Saxifraga oppositifolia Alaska Wiley Online Library American Journal of Botany 90 6 931 936
institution Open Polar
collection Wiley Online Library
op_collection_id crwiley
language English
description Saxifraga oppositifolia (Saxifragaceae) is an important model system for the evolution of Arctic‐Alpine plant species. Sequences of the psb A– trn H intergenic spacer of chloroplast DNA and of the internal transcribed spacer region, ITS1–5.8S–ITS2, of the nuclear ribosomal DNA were used to investigate the intraspecific evolution and phylogeography of this species. Samples from nearly the species' entire circumpolar distribution were included in the analysis as well as samples from the closely related taxa S. smalliana from Alaska and S. blepharophylla and S. biflora from the Alps ( S. aizoides served as outgroup). These latter taxa showed a low number of parsimony informative characters, in both cpDNA and ITS sequences, which separated them from S. oppositifolia . Two main cpDNA haplotypes were detected within S. oppositifolia , one with a Eurasian distribution and one with an East Asian‐North American distribution. This confirmed the existence of two cpDNA lineages with different geographical distributions in this species, which had previously been reported based on a RFLP analysis. The ITS phylogeny was not useful with respect to the intraspecific evolution and phylogeography of S. oppositifolia , because it showed a largely unresolved topology with low statistical support. The cpDNA sequence analysis, however, also suggested a putative long‐distance dispersal event. All investigated taxa had cpDNA haplotypes that were congruent with their geographical origin rather than their phylogeny. This could point to putative lineage sorting in S. oppositifolia and related taxa.
author2 Schweizerischer Nationalfonds zur Förderung der Wissenschaftlichen Forschung
format Article in Journal/Newspaper
author Holderegger, Rolf
Abbott, Richard J.
spellingShingle Holderegger, Rolf
Abbott, Richard J.
Phylogeography of the Arctic‐Alpine Saxifraga oppositifolia (Saxifragaceae) and some related taxa based on cpDNA and ITS sequence variation
author_facet Holderegger, Rolf
Abbott, Richard J.
author_sort Holderegger, Rolf
title Phylogeography of the Arctic‐Alpine Saxifraga oppositifolia (Saxifragaceae) and some related taxa based on cpDNA and ITS sequence variation
title_short Phylogeography of the Arctic‐Alpine Saxifraga oppositifolia (Saxifragaceae) and some related taxa based on cpDNA and ITS sequence variation
title_full Phylogeography of the Arctic‐Alpine Saxifraga oppositifolia (Saxifragaceae) and some related taxa based on cpDNA and ITS sequence variation
title_fullStr Phylogeography of the Arctic‐Alpine Saxifraga oppositifolia (Saxifragaceae) and some related taxa based on cpDNA and ITS sequence variation
title_full_unstemmed Phylogeography of the Arctic‐Alpine Saxifraga oppositifolia (Saxifragaceae) and some related taxa based on cpDNA and ITS sequence variation
title_sort phylogeography of the arctic‐alpine saxifraga oppositifolia (saxifragaceae) and some related taxa based on cpdna and its sequence variation
publisher Wiley
publishDate 2003
url http://dx.doi.org/10.3732/ajb.90.6.931
https://onlinelibrary.wiley.com/doi/full/10.3732/ajb.90.6.931
genre Saxifraga oppositifolia
Alaska
genre_facet Saxifraga oppositifolia
Alaska
op_source American Journal of Botany
volume 90, issue 6, page 931-936
ISSN 0002-9122 1537-2197
op_rights http://onlinelibrary.wiley.com/termsAndConditions#vor
op_doi https://doi.org/10.3732/ajb.90.6.931
container_title American Journal of Botany
container_volume 90
container_issue 6
container_start_page 931
op_container_end_page 936
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