Molecular response of Sargassum vulgare to acidification at volcanic <scp>CO</scp> 2 vents: insights from de novo transcriptomic analysis

Abstract Ocean acidification is an emerging problem that is expected to impact ocean species to varying degrees. Currently, little is known about its effect on molecular mechanisms induced in fleshy macroalgae. To elucidate genome wide responses to acidification, a transcriptome analysis was carried...

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Published in:Molecular Ecology
Main Authors: Kumar, Amit, Castellano, Immacolata, Patti, Francesco Paolo, Delledonne, Massimo, Abdelgawad, Hamada, Beemster, Gerrit T. S., Asard, Han, Palumbo, Anna, Buia, Maria Cristina
Other Authors: SZN, Flagship RITMARE - The Italian Research for the Sea -, Italian National Research Council, Italian Ministry of Education, University and Research within the National Research Program
Format: Article in Journal/Newspaper
Language:English
Published: Wiley 2017
Subjects:
Online Access:http://dx.doi.org/10.1111/mec.14034
https://api.wiley.com/onlinelibrary/tdm/v1/articles/10.1111%2Fmec.14034
https://onlinelibrary.wiley.com/doi/pdf/10.1111/mec.14034
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spelling crwiley:10.1111/mec.14034 2024-04-28T08:34:55+00:00 Molecular response of Sargassum vulgare to acidification at volcanic <scp>CO</scp> 2 vents: insights from de novo transcriptomic analysis Kumar, Amit Castellano, Immacolata Patti, Francesco Paolo Delledonne, Massimo Abdelgawad, Hamada Beemster, Gerrit T. S. Asard, Han Palumbo, Anna Buia, Maria Cristina SZN Flagship RITMARE - The Italian Research for the Sea - Italian National Research Council Italian Ministry of Education, University and Research within the National Research Program 2017 http://dx.doi.org/10.1111/mec.14034 https://api.wiley.com/onlinelibrary/tdm/v1/articles/10.1111%2Fmec.14034 https://onlinelibrary.wiley.com/doi/pdf/10.1111/mec.14034 en eng Wiley http://onlinelibrary.wiley.com/termsAndConditions#vor http://doi.wiley.com/10.1002/tdm_license_1 http://onlinelibrary.wiley.com/termsAndConditions Molecular Ecology volume 26, issue 8, page 2276-2290 ISSN 0962-1083 1365-294X Genetics Ecology, Evolution, Behavior and Systematics journal-article 2017 crwiley https://doi.org/10.1111/mec.14034 2024-04-08T06:55:25Z Abstract Ocean acidification is an emerging problem that is expected to impact ocean species to varying degrees. Currently, little is known about its effect on molecular mechanisms induced in fleshy macroalgae. To elucidate genome wide responses to acidification, a transcriptome analysis was carried out on Sargassum vulgare populations growing under acidified conditions at volcanic CO 2 vents and compared with populations in a control site. Several transcripts involved in a wide range of cellular and metabolic processes were differentially expressed. No drastic changes were observed in the carbon acquisition processes and RuBis CO level. Moreover, relatively few stress genes, including those for antioxidant enzymes and heat‐shock proteins, were affected. Instead, increased expression of transcripts involved in energy metabolism, photosynthetic processes and ion homeostasis suggested that algae increased energy production to maintain ion homeostasis and other cellular processes. Also, an increased allocation of carbon to cell wall and carbon storage was observed. A number of genes encoding proteins involved in cellular signalling, information storage and processing and transposition were differentially expressed between the two conditions. The transcriptional changes of key enzymes were largely confirmed by enzymatic activity measurements. Altogether, the changes induced by acidification indicate an adaptation of growth and development of S. vulgare at the volcanic CO 2 vents, suggesting that this fleshy alga exhibits a high plasticity to low pH and can adopt molecular strategies to grow also in future more acidified waters. Article in Journal/Newspaper Ocean acidification Wiley Online Library Molecular Ecology 26 8 2276 2290
institution Open Polar
collection Wiley Online Library
op_collection_id crwiley
language English
topic Genetics
Ecology, Evolution, Behavior and Systematics
spellingShingle Genetics
Ecology, Evolution, Behavior and Systematics
Kumar, Amit
Castellano, Immacolata
Patti, Francesco Paolo
Delledonne, Massimo
Abdelgawad, Hamada
Beemster, Gerrit T. S.
Asard, Han
Palumbo, Anna
Buia, Maria Cristina
Molecular response of Sargassum vulgare to acidification at volcanic <scp>CO</scp> 2 vents: insights from de novo transcriptomic analysis
topic_facet Genetics
Ecology, Evolution, Behavior and Systematics
description Abstract Ocean acidification is an emerging problem that is expected to impact ocean species to varying degrees. Currently, little is known about its effect on molecular mechanisms induced in fleshy macroalgae. To elucidate genome wide responses to acidification, a transcriptome analysis was carried out on Sargassum vulgare populations growing under acidified conditions at volcanic CO 2 vents and compared with populations in a control site. Several transcripts involved in a wide range of cellular and metabolic processes were differentially expressed. No drastic changes were observed in the carbon acquisition processes and RuBis CO level. Moreover, relatively few stress genes, including those for antioxidant enzymes and heat‐shock proteins, were affected. Instead, increased expression of transcripts involved in energy metabolism, photosynthetic processes and ion homeostasis suggested that algae increased energy production to maintain ion homeostasis and other cellular processes. Also, an increased allocation of carbon to cell wall and carbon storage was observed. A number of genes encoding proteins involved in cellular signalling, information storage and processing and transposition were differentially expressed between the two conditions. The transcriptional changes of key enzymes were largely confirmed by enzymatic activity measurements. Altogether, the changes induced by acidification indicate an adaptation of growth and development of S. vulgare at the volcanic CO 2 vents, suggesting that this fleshy alga exhibits a high plasticity to low pH and can adopt molecular strategies to grow also in future more acidified waters.
author2 SZN
Flagship RITMARE - The Italian Research for the Sea -
Italian National Research Council
Italian Ministry of Education, University and Research within the National Research Program
format Article in Journal/Newspaper
author Kumar, Amit
Castellano, Immacolata
Patti, Francesco Paolo
Delledonne, Massimo
Abdelgawad, Hamada
Beemster, Gerrit T. S.
Asard, Han
Palumbo, Anna
Buia, Maria Cristina
author_facet Kumar, Amit
Castellano, Immacolata
Patti, Francesco Paolo
Delledonne, Massimo
Abdelgawad, Hamada
Beemster, Gerrit T. S.
Asard, Han
Palumbo, Anna
Buia, Maria Cristina
author_sort Kumar, Amit
title Molecular response of Sargassum vulgare to acidification at volcanic <scp>CO</scp> 2 vents: insights from de novo transcriptomic analysis
title_short Molecular response of Sargassum vulgare to acidification at volcanic <scp>CO</scp> 2 vents: insights from de novo transcriptomic analysis
title_full Molecular response of Sargassum vulgare to acidification at volcanic <scp>CO</scp> 2 vents: insights from de novo transcriptomic analysis
title_fullStr Molecular response of Sargassum vulgare to acidification at volcanic <scp>CO</scp> 2 vents: insights from de novo transcriptomic analysis
title_full_unstemmed Molecular response of Sargassum vulgare to acidification at volcanic <scp>CO</scp> 2 vents: insights from de novo transcriptomic analysis
title_sort molecular response of sargassum vulgare to acidification at volcanic <scp>co</scp> 2 vents: insights from de novo transcriptomic analysis
publisher Wiley
publishDate 2017
url http://dx.doi.org/10.1111/mec.14034
https://api.wiley.com/onlinelibrary/tdm/v1/articles/10.1111%2Fmec.14034
https://onlinelibrary.wiley.com/doi/pdf/10.1111/mec.14034
genre Ocean acidification
genre_facet Ocean acidification
op_source Molecular Ecology
volume 26, issue 8, page 2276-2290
ISSN 0962-1083 1365-294X
op_rights http://onlinelibrary.wiley.com/termsAndConditions#vor
http://doi.wiley.com/10.1002/tdm_license_1
http://onlinelibrary.wiley.com/termsAndConditions
op_doi https://doi.org/10.1111/mec.14034
container_title Molecular Ecology
container_volume 26
container_issue 8
container_start_page 2276
op_container_end_page 2290
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