Protist distribution in the Western Fram Strait in summer 2010 based on 454‐pyrosequencing of 18S rDNA

In this study, we present the first comprehensive analyses of the diversity and distribution of marine protist (micro‐, nano‐, and picoeukaryotes) in the Western Fram Strait, using 454‐pyrosequencing and high‐pressure liquid chromatography ( HPLC ) at five stations in summer 2010. Three stations (T1...

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Published in:Journal of Phycology
Main Authors: Kilias, Estelle, Wolf, Christian, Nöthig, Eva‐Maria, Peeken, Ilka, Metfies, Katja
Other Authors: Mock, T., Initiative and Networking Fund
Format: Article in Journal/Newspaper
Language:English
Published: Wiley 2013
Subjects:
Online Access:http://dx.doi.org/10.1111/jpy.12109
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spelling crwiley:10.1111/jpy.12109 2024-06-23T07:52:54+00:00 Protist distribution in the Western Fram Strait in summer 2010 based on 454‐pyrosequencing of 18S rDNA Kilias, Estelle Wolf, Christian Nöthig, Eva‐Maria Peeken, Ilka Metfies, Katja Mock, T. Initiative and Networking Fund 2013 http://dx.doi.org/10.1111/jpy.12109 https://api.wiley.com/onlinelibrary/tdm/v1/articles/10.1111%2Fjpy.12109 https://onlinelibrary.wiley.com/doi/pdf/10.1111/jpy.12109 en eng Wiley http://onlinelibrary.wiley.com/termsAndConditions#vor Journal of Phycology volume 49, issue 5, page 996-1010 ISSN 0022-3646 1529-8817 journal-article 2013 crwiley https://doi.org/10.1111/jpy.12109 2024-06-11T04:47:50Z In this study, we present the first comprehensive analyses of the diversity and distribution of marine protist (micro‐, nano‐, and picoeukaryotes) in the Western Fram Strait, using 454‐pyrosequencing and high‐pressure liquid chromatography ( HPLC ) at five stations in summer 2010. Three stations (T1; T5; T7) were influenced by Polar Water, characterized by cold water with lower salinity (<33) and different extents of ice concentrations. Atlantic Water influenced the other two stations (T6; T9). While T6 was located in the mixed water zone characterized by cold water with intermediate salinity (~33) and high ice concentrations, T9 was located in warm water with high salinity (~35) and no ice‐coverage at all. General trends in community structure according to prevailing environmental settings, observed with both methods, coincided well. At two stations, T1 and T7, characterized by lower ice concentrations, diatoms ( F ragilariopsis sp. , P orosira sp., T halassiosira spp.) dominated the protist community. The third station (T5) was ice‐covered, but has been ice‐free for ~4 weeks prior to sampling. At this station, dinoflagellates ( D inophyceae 1, W oloszynskia sp. and G yrodinium sp.) were dominant, reflecting a post‐bloom situation. At station T6 and T9, the protist communities consisted mainly of picoeukaryotes, e.g., M icromonas spp. Based on our results, 454‐pyrosequencing has proven to be an adequate tool to provide comprehensive information on the composition of protist communities. Furthermore, this study suggests that a snap‐shot of a few, but well‐chosen samples can provide an overview of community structure patterns and succession in a dynamic marine environment. Article in Journal/Newspaper Fram Strait Wiley Online Library Journal of Phycology 49 5 996 1010
institution Open Polar
collection Wiley Online Library
op_collection_id crwiley
language English
description In this study, we present the first comprehensive analyses of the diversity and distribution of marine protist (micro‐, nano‐, and picoeukaryotes) in the Western Fram Strait, using 454‐pyrosequencing and high‐pressure liquid chromatography ( HPLC ) at five stations in summer 2010. Three stations (T1; T5; T7) were influenced by Polar Water, characterized by cold water with lower salinity (<33) and different extents of ice concentrations. Atlantic Water influenced the other two stations (T6; T9). While T6 was located in the mixed water zone characterized by cold water with intermediate salinity (~33) and high ice concentrations, T9 was located in warm water with high salinity (~35) and no ice‐coverage at all. General trends in community structure according to prevailing environmental settings, observed with both methods, coincided well. At two stations, T1 and T7, characterized by lower ice concentrations, diatoms ( F ragilariopsis sp. , P orosira sp., T halassiosira spp.) dominated the protist community. The third station (T5) was ice‐covered, but has been ice‐free for ~4 weeks prior to sampling. At this station, dinoflagellates ( D inophyceae 1, W oloszynskia sp. and G yrodinium sp.) were dominant, reflecting a post‐bloom situation. At station T6 and T9, the protist communities consisted mainly of picoeukaryotes, e.g., M icromonas spp. Based on our results, 454‐pyrosequencing has proven to be an adequate tool to provide comprehensive information on the composition of protist communities. Furthermore, this study suggests that a snap‐shot of a few, but well‐chosen samples can provide an overview of community structure patterns and succession in a dynamic marine environment.
author2 Mock, T.
Initiative and Networking Fund
format Article in Journal/Newspaper
author Kilias, Estelle
Wolf, Christian
Nöthig, Eva‐Maria
Peeken, Ilka
Metfies, Katja
spellingShingle Kilias, Estelle
Wolf, Christian
Nöthig, Eva‐Maria
Peeken, Ilka
Metfies, Katja
Protist distribution in the Western Fram Strait in summer 2010 based on 454‐pyrosequencing of 18S rDNA
author_facet Kilias, Estelle
Wolf, Christian
Nöthig, Eva‐Maria
Peeken, Ilka
Metfies, Katja
author_sort Kilias, Estelle
title Protist distribution in the Western Fram Strait in summer 2010 based on 454‐pyrosequencing of 18S rDNA
title_short Protist distribution in the Western Fram Strait in summer 2010 based on 454‐pyrosequencing of 18S rDNA
title_full Protist distribution in the Western Fram Strait in summer 2010 based on 454‐pyrosequencing of 18S rDNA
title_fullStr Protist distribution in the Western Fram Strait in summer 2010 based on 454‐pyrosequencing of 18S rDNA
title_full_unstemmed Protist distribution in the Western Fram Strait in summer 2010 based on 454‐pyrosequencing of 18S rDNA
title_sort protist distribution in the western fram strait in summer 2010 based on 454‐pyrosequencing of 18s rdna
publisher Wiley
publishDate 2013
url http://dx.doi.org/10.1111/jpy.12109
https://api.wiley.com/onlinelibrary/tdm/v1/articles/10.1111%2Fjpy.12109
https://onlinelibrary.wiley.com/doi/pdf/10.1111/jpy.12109
genre Fram Strait
genre_facet Fram Strait
op_source Journal of Phycology
volume 49, issue 5, page 996-1010
ISSN 0022-3646 1529-8817
op_rights http://onlinelibrary.wiley.com/termsAndConditions#vor
op_doi https://doi.org/10.1111/jpy.12109
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