Specific immunity proteomic profile of the skin mucus of Antarctic fish <scp> Chionodraco hamatus </scp> and <scp> Notothenia coriiceps </scp>

Abstract The white‐blooded Antarctic icefish is the only known vertebrate lacking oxygen‐transporting haemoglobins. Fish skin mucus, as the first line of defence against pathogens, can reflect fish welfare. In this study, we analysed the skin mucus proteome profiles of the two Antarctic fish species...

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Published in:Journal of Fish Biology
Main Authors: Huang, Shaojun, Jia, Ruonan, Hu, Ruiqin, Zhai, Wanying, Jiang, Shouwen, Li, Wenhao, Wang, Faxiang, Xu, Qianghua
Other Authors: National Basic Research Program of China, National Natural Science Foundation of China
Format: Article in Journal/Newspaper
Language:English
Published: Wiley 2021
Subjects:
Online Access:http://dx.doi.org/10.1111/jfb.14908
https://onlinelibrary.wiley.com/doi/pdf/10.1111/jfb.14908
https://onlinelibrary.wiley.com/doi/full-xml/10.1111/jfb.14908
id crwiley:10.1111/jfb.14908
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spelling crwiley:10.1111/jfb.14908 2024-04-28T08:00:41+00:00 Specific immunity proteomic profile of the skin mucus of Antarctic fish <scp> Chionodraco hamatus </scp> and <scp> Notothenia coriiceps </scp> Huang, Shaojun Jia, Ruonan Hu, Ruiqin Zhai, Wanying Jiang, Shouwen Li, Wenhao Wang, Faxiang Xu, Qianghua National Basic Research Program of China National Natural Science Foundation of China 2021 http://dx.doi.org/10.1111/jfb.14908 https://onlinelibrary.wiley.com/doi/pdf/10.1111/jfb.14908 https://onlinelibrary.wiley.com/doi/full-xml/10.1111/jfb.14908 en eng Wiley http://onlinelibrary.wiley.com/termsAndConditions#vor Journal of Fish Biology volume 99, issue 6, page 1998-2007 ISSN 0022-1112 1095-8649 Aquatic Science Ecology, Evolution, Behavior and Systematics journal-article 2021 crwiley https://doi.org/10.1111/jfb.14908 2024-04-02T08:47:07Z Abstract The white‐blooded Antarctic icefish is the only known vertebrate lacking oxygen‐transporting haemoglobins. Fish skin mucus, as the first line of defence against pathogens, can reflect fish welfare. In this study, we analysed the skin mucus proteome profiles of the two Antarctic fish species, the white‐blooded Antarctic icefish, Chionodraco hamatus , and the red‐blooded Antarctic fish, Notothenia coriiceps , unfolding the different proteins by liquid chromatography coupled with tandem mass spectrometry isobaric tags for relative and absolute quantitation (iTRAQ) technology. Of the 4444 totally identified proteins, 227 differentially expressed proteins (DEPs) were found in the comparison between C. hamatus and N. coriiceps , of which 121 were upregulated and 106 were downregulated in the icefish. In the Kyoto Encyclopedia of Genes and Genomes pathway annotation, we found two pathways “Legionellosis” and “Complement and coagulation cascades” were significantly enriched, among of which innate immune candidate proteins such as C3, CASP1, ASC, F3 and C9 were significantly upregulated, suggesting their important roles in C. hamatus immune system. Additionally, the DEP protein–protein interaction network analysis and “Response to stress” GO category provided candidate biomarkers for deep understanding of the distinct immune response of the two Antarctic fish underlying the cold adaptation. Article in Journal/Newspaper Antarc* Antarctic Icefish Wiley Online Library Journal of Fish Biology
institution Open Polar
collection Wiley Online Library
op_collection_id crwiley
language English
topic Aquatic Science
Ecology, Evolution, Behavior and Systematics
spellingShingle Aquatic Science
Ecology, Evolution, Behavior and Systematics
Huang, Shaojun
Jia, Ruonan
Hu, Ruiqin
Zhai, Wanying
Jiang, Shouwen
Li, Wenhao
Wang, Faxiang
Xu, Qianghua
Specific immunity proteomic profile of the skin mucus of Antarctic fish <scp> Chionodraco hamatus </scp> and <scp> Notothenia coriiceps </scp>
topic_facet Aquatic Science
Ecology, Evolution, Behavior and Systematics
description Abstract The white‐blooded Antarctic icefish is the only known vertebrate lacking oxygen‐transporting haemoglobins. Fish skin mucus, as the first line of defence against pathogens, can reflect fish welfare. In this study, we analysed the skin mucus proteome profiles of the two Antarctic fish species, the white‐blooded Antarctic icefish, Chionodraco hamatus , and the red‐blooded Antarctic fish, Notothenia coriiceps , unfolding the different proteins by liquid chromatography coupled with tandem mass spectrometry isobaric tags for relative and absolute quantitation (iTRAQ) technology. Of the 4444 totally identified proteins, 227 differentially expressed proteins (DEPs) were found in the comparison between C. hamatus and N. coriiceps , of which 121 were upregulated and 106 were downregulated in the icefish. In the Kyoto Encyclopedia of Genes and Genomes pathway annotation, we found two pathways “Legionellosis” and “Complement and coagulation cascades” were significantly enriched, among of which innate immune candidate proteins such as C3, CASP1, ASC, F3 and C9 were significantly upregulated, suggesting their important roles in C. hamatus immune system. Additionally, the DEP protein–protein interaction network analysis and “Response to stress” GO category provided candidate biomarkers for deep understanding of the distinct immune response of the two Antarctic fish underlying the cold adaptation.
author2 National Basic Research Program of China
National Natural Science Foundation of China
format Article in Journal/Newspaper
author Huang, Shaojun
Jia, Ruonan
Hu, Ruiqin
Zhai, Wanying
Jiang, Shouwen
Li, Wenhao
Wang, Faxiang
Xu, Qianghua
author_facet Huang, Shaojun
Jia, Ruonan
Hu, Ruiqin
Zhai, Wanying
Jiang, Shouwen
Li, Wenhao
Wang, Faxiang
Xu, Qianghua
author_sort Huang, Shaojun
title Specific immunity proteomic profile of the skin mucus of Antarctic fish <scp> Chionodraco hamatus </scp> and <scp> Notothenia coriiceps </scp>
title_short Specific immunity proteomic profile of the skin mucus of Antarctic fish <scp> Chionodraco hamatus </scp> and <scp> Notothenia coriiceps </scp>
title_full Specific immunity proteomic profile of the skin mucus of Antarctic fish <scp> Chionodraco hamatus </scp> and <scp> Notothenia coriiceps </scp>
title_fullStr Specific immunity proteomic profile of the skin mucus of Antarctic fish <scp> Chionodraco hamatus </scp> and <scp> Notothenia coriiceps </scp>
title_full_unstemmed Specific immunity proteomic profile of the skin mucus of Antarctic fish <scp> Chionodraco hamatus </scp> and <scp> Notothenia coriiceps </scp>
title_sort specific immunity proteomic profile of the skin mucus of antarctic fish <scp> chionodraco hamatus </scp> and <scp> notothenia coriiceps </scp>
publisher Wiley
publishDate 2021
url http://dx.doi.org/10.1111/jfb.14908
https://onlinelibrary.wiley.com/doi/pdf/10.1111/jfb.14908
https://onlinelibrary.wiley.com/doi/full-xml/10.1111/jfb.14908
genre Antarc*
Antarctic
Icefish
genre_facet Antarc*
Antarctic
Icefish
op_source Journal of Fish Biology
volume 99, issue 6, page 1998-2007
ISSN 0022-1112 1095-8649
op_rights http://onlinelibrary.wiley.com/termsAndConditions#vor
op_doi https://doi.org/10.1111/jfb.14908
container_title Journal of Fish Biology
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