Eukaryotic Sequences in the 16Sr RNA Metagenomic Dataset of Algal–bacterial Consortia of the White Sea Coastal Zone
Abstract The libraries of bacterial 16Sr RNA gene fragment from algal–bacterial consortia of the White Sea coastal zone are analyzed. Up to 3% of the reads have revealed to correspond to eukaryotic rRNA . They related to following main eukaryotic clades: Discoba, Stramenopiles, Ciliata, Amoebozoa, a...
Published in: | Journal of Eukaryotic Microbiology |
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crwiley:10.1111/jeu.12722 2024-09-15T18:40:39+00:00 Eukaryotic Sequences in the 16Sr RNA Metagenomic Dataset of Algal–bacterial Consortia of the White Sea Coastal Zone Chekanov, Konstantin Kublanovskaya, Anna Lobakova, Elena Council on grants of the President of the Russian Federation Russian Foundation for Basic Research 2019 http://dx.doi.org/10.1111/jeu.12722 https://api.wiley.com/onlinelibrary/tdm/v1/articles/10.1111%2Fjeu.12722 https://onlinelibrary.wiley.com/doi/pdf/10.1111/jeu.12722 https://onlinelibrary.wiley.com/doi/full-xml/10.1111/jeu.12722 en eng Wiley http://onlinelibrary.wiley.com/termsAndConditions#vor Journal of Eukaryotic Microbiology volume 66, issue 5, page 853-856 ISSN 1066-5234 1550-7408 journal-article 2019 crwiley https://doi.org/10.1111/jeu.12722 2024-08-20T04:12:03Z Abstract The libraries of bacterial 16Sr RNA gene fragment from algal–bacterial consortia of the White Sea coastal zone are analyzed. Up to 3% of the reads have revealed to correspond to eukaryotic rRNA . They related to following main eukaryotic clades: Discoba, Stramenopiles, Ciliata, Amoebozoa, and Nucletmycea. Amoebae, especially Vermamoeba , were present in all samples. In one sample, heterolobose amoeba Paravahlkampfia was detected. These microorganisms are parasites of microalgae, which can induce significant damage to industrial cultures. However, the data on their physiology and distribution are scarce. This study provides new evidence about the diversity of herbivorous eukaryotic microorganisms in natural algal‐containing consortia. Article in Journal/Newspaper White Sea Wiley Online Library Journal of Eukaryotic Microbiology 66 5 853 856 |
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Wiley Online Library |
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crwiley |
language |
English |
description |
Abstract The libraries of bacterial 16Sr RNA gene fragment from algal–bacterial consortia of the White Sea coastal zone are analyzed. Up to 3% of the reads have revealed to correspond to eukaryotic rRNA . They related to following main eukaryotic clades: Discoba, Stramenopiles, Ciliata, Amoebozoa, and Nucletmycea. Amoebae, especially Vermamoeba , were present in all samples. In one sample, heterolobose amoeba Paravahlkampfia was detected. These microorganisms are parasites of microalgae, which can induce significant damage to industrial cultures. However, the data on their physiology and distribution are scarce. This study provides new evidence about the diversity of herbivorous eukaryotic microorganisms in natural algal‐containing consortia. |
author2 |
Council on grants of the President of the Russian Federation Russian Foundation for Basic Research |
format |
Article in Journal/Newspaper |
author |
Chekanov, Konstantin Kublanovskaya, Anna Lobakova, Elena |
spellingShingle |
Chekanov, Konstantin Kublanovskaya, Anna Lobakova, Elena Eukaryotic Sequences in the 16Sr RNA Metagenomic Dataset of Algal–bacterial Consortia of the White Sea Coastal Zone |
author_facet |
Chekanov, Konstantin Kublanovskaya, Anna Lobakova, Elena |
author_sort |
Chekanov, Konstantin |
title |
Eukaryotic Sequences in the 16Sr RNA Metagenomic Dataset of Algal–bacterial Consortia of the White Sea Coastal Zone |
title_short |
Eukaryotic Sequences in the 16Sr RNA Metagenomic Dataset of Algal–bacterial Consortia of the White Sea Coastal Zone |
title_full |
Eukaryotic Sequences in the 16Sr RNA Metagenomic Dataset of Algal–bacterial Consortia of the White Sea Coastal Zone |
title_fullStr |
Eukaryotic Sequences in the 16Sr RNA Metagenomic Dataset of Algal–bacterial Consortia of the White Sea Coastal Zone |
title_full_unstemmed |
Eukaryotic Sequences in the 16Sr RNA Metagenomic Dataset of Algal–bacterial Consortia of the White Sea Coastal Zone |
title_sort |
eukaryotic sequences in the 16sr rna metagenomic dataset of algal–bacterial consortia of the white sea coastal zone |
publisher |
Wiley |
publishDate |
2019 |
url |
http://dx.doi.org/10.1111/jeu.12722 https://api.wiley.com/onlinelibrary/tdm/v1/articles/10.1111%2Fjeu.12722 https://onlinelibrary.wiley.com/doi/pdf/10.1111/jeu.12722 https://onlinelibrary.wiley.com/doi/full-xml/10.1111/jeu.12722 |
genre |
White Sea |
genre_facet |
White Sea |
op_source |
Journal of Eukaryotic Microbiology volume 66, issue 5, page 853-856 ISSN 1066-5234 1550-7408 |
op_rights |
http://onlinelibrary.wiley.com/termsAndConditions#vor |
op_doi |
https://doi.org/10.1111/jeu.12722 |
container_title |
Journal of Eukaryotic Microbiology |
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66 |
container_issue |
5 |
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853 |
op_container_end_page |
856 |
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1810485056925335552 |