Breaking the sticks: a hierarchical change‐point model for estimating ontogenetic shifts with stable isotope data
Summary 1. Stable isotopes are increasingly used in ecology to investigate ontogenetic shifts in foraging habitat (via δ 13 C) and in trophic level (via δ 15 N). These shifts are in essence an individual‐level phenomenon, requiring repeated measures throughout the life of individuals, i.e. longitudi...
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crwiley:10.1111/j.2041-210x.2011.00162.x 2023-12-03T10:22:08+01:00 Breaking the sticks: a hierarchical change‐point model for estimating ontogenetic shifts with stable isotope data Authier, Matthieu Martin, Céline Ponchon, Aurore Steelandt, Stephanie Bentaleb, Ilham Guinet, Christophe 2011 http://dx.doi.org/10.1111/j.2041-210x.2011.00162.x https://api.wiley.com/onlinelibrary/tdm/v1/articles/10.1111%2Fj.2041-210X.2011.00162.x https://besjournals.onlinelibrary.wiley.com/doi/pdf/10.1111/j.2041-210X.2011.00162.x en eng Wiley http://onlinelibrary.wiley.com/termsAndConditions#vor Methods in Ecology and Evolution volume 3, issue 2, page 281-290 ISSN 2041-210X 2041-210X Ecological Modeling Ecology, Evolution, Behavior and Systematics journal-article 2011 crwiley https://doi.org/10.1111/j.2041-210x.2011.00162.x 2023-11-09T13:38:39Z Summary 1. Stable isotopes are increasingly used in ecology to investigate ontogenetic shifts in foraging habitat (via δ 13 C) and in trophic level (via δ 15 N). These shifts are in essence an individual‐level phenomenon, requiring repeated measures throughout the life of individuals, i.e. longitudinal data. Longitudinal data require in turn specifying an appropriate covariance structure. Here we present a hierarchical model to jointly investigate individual ontogenetic shifts in δ 13 C and δ 15 N values. 2. In a Bayesian framework, we used a Cholesky decomposition for estimating a moderately‐sized covariance matrix, thereby directly estimating correlations between parameters describing time‐series of isotopic measurements. We offer guidelines on how to select the covariance structure. 3. The approach is illustrated with a hierarchical change‐point (or broken stick) model applied to a data set collected on Southern Elephant Seals, Mirounga leonina . Ontogenetic shifts in foraging habitat, following a juvenile and variable stage, were detected and interpreted as fidelity to a foraging strategy; while ontogenetic shifts in trophic level were more likely the result of complete independence from maternal resources followed by a gradual increase in trophic level as seals aged. 4. Specifying both an appropriate covariance and mean structure enabled us to draw strong inferences on the ecology of an elusive marine predator, and has wide applicability for isotopic ecology provided repeated isotopic measurements are available. Article in Journal/Newspaper Elephant Seals Mirounga leonina Southern Elephant Seals Wiley Online Library (via Crossref) Methods in Ecology and Evolution 3 2 281 290 |
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Open Polar |
collection |
Wiley Online Library (via Crossref) |
op_collection_id |
crwiley |
language |
English |
topic |
Ecological Modeling Ecology, Evolution, Behavior and Systematics |
spellingShingle |
Ecological Modeling Ecology, Evolution, Behavior and Systematics Authier, Matthieu Martin, Céline Ponchon, Aurore Steelandt, Stephanie Bentaleb, Ilham Guinet, Christophe Breaking the sticks: a hierarchical change‐point model for estimating ontogenetic shifts with stable isotope data |
topic_facet |
Ecological Modeling Ecology, Evolution, Behavior and Systematics |
description |
Summary 1. Stable isotopes are increasingly used in ecology to investigate ontogenetic shifts in foraging habitat (via δ 13 C) and in trophic level (via δ 15 N). These shifts are in essence an individual‐level phenomenon, requiring repeated measures throughout the life of individuals, i.e. longitudinal data. Longitudinal data require in turn specifying an appropriate covariance structure. Here we present a hierarchical model to jointly investigate individual ontogenetic shifts in δ 13 C and δ 15 N values. 2. In a Bayesian framework, we used a Cholesky decomposition for estimating a moderately‐sized covariance matrix, thereby directly estimating correlations between parameters describing time‐series of isotopic measurements. We offer guidelines on how to select the covariance structure. 3. The approach is illustrated with a hierarchical change‐point (or broken stick) model applied to a data set collected on Southern Elephant Seals, Mirounga leonina . Ontogenetic shifts in foraging habitat, following a juvenile and variable stage, were detected and interpreted as fidelity to a foraging strategy; while ontogenetic shifts in trophic level were more likely the result of complete independence from maternal resources followed by a gradual increase in trophic level as seals aged. 4. Specifying both an appropriate covariance and mean structure enabled us to draw strong inferences on the ecology of an elusive marine predator, and has wide applicability for isotopic ecology provided repeated isotopic measurements are available. |
format |
Article in Journal/Newspaper |
author |
Authier, Matthieu Martin, Céline Ponchon, Aurore Steelandt, Stephanie Bentaleb, Ilham Guinet, Christophe |
author_facet |
Authier, Matthieu Martin, Céline Ponchon, Aurore Steelandt, Stephanie Bentaleb, Ilham Guinet, Christophe |
author_sort |
Authier, Matthieu |
title |
Breaking the sticks: a hierarchical change‐point model for estimating ontogenetic shifts with stable isotope data |
title_short |
Breaking the sticks: a hierarchical change‐point model for estimating ontogenetic shifts with stable isotope data |
title_full |
Breaking the sticks: a hierarchical change‐point model for estimating ontogenetic shifts with stable isotope data |
title_fullStr |
Breaking the sticks: a hierarchical change‐point model for estimating ontogenetic shifts with stable isotope data |
title_full_unstemmed |
Breaking the sticks: a hierarchical change‐point model for estimating ontogenetic shifts with stable isotope data |
title_sort |
breaking the sticks: a hierarchical change‐point model for estimating ontogenetic shifts with stable isotope data |
publisher |
Wiley |
publishDate |
2011 |
url |
http://dx.doi.org/10.1111/j.2041-210x.2011.00162.x https://api.wiley.com/onlinelibrary/tdm/v1/articles/10.1111%2Fj.2041-210X.2011.00162.x https://besjournals.onlinelibrary.wiley.com/doi/pdf/10.1111/j.2041-210X.2011.00162.x |
genre |
Elephant Seals Mirounga leonina Southern Elephant Seals |
genre_facet |
Elephant Seals Mirounga leonina Southern Elephant Seals |
op_source |
Methods in Ecology and Evolution volume 3, issue 2, page 281-290 ISSN 2041-210X 2041-210X |
op_rights |
http://onlinelibrary.wiley.com/termsAndConditions#vor |
op_doi |
https://doi.org/10.1111/j.2041-210x.2011.00162.x |
container_title |
Methods in Ecology and Evolution |
container_volume |
3 |
container_issue |
2 |
container_start_page |
281 |
op_container_end_page |
290 |
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1784269979629125632 |