Late‐Holocene succession of dinoflagellates in an Antarctic fjord using a multi‐proxy approach: paleoenvironmental genomics, lipid biomarkers and palynomorphs

Abstract Recent work has shown that paleoenvironmental genomics, i.e. the application of genomic tools to analyze preserved DNA in sedimentary records, is a promising approach to reconstruct the diversity of past planktonic communities. This provides information about past ecological and environment...

Full description

Bibliographic Details
Published in:Geobiology
Main Authors: BOERE, A. C., ABBAS, B., RIJPSTRA, W. I. C., VERSTEEGH, G. J. M., VOLKMAN, J. K., SINNINGHE DAMSTÉ, J. S., COOLEN, M. J. L.
Format: Article in Journal/Newspaper
Language:English
Published: Wiley 2009
Subjects:
Online Access:http://dx.doi.org/10.1111/j.1472-4669.2009.00202.x
https://api.wiley.com/onlinelibrary/tdm/v1/articles/10.1111%2Fj.1472-4669.2009.00202.x
https://onlinelibrary.wiley.com/doi/pdf/10.1111/j.1472-4669.2009.00202.x
id crwiley:10.1111/j.1472-4669.2009.00202.x
record_format openpolar
spelling crwiley:10.1111/j.1472-4669.2009.00202.x 2024-09-15T17:47:31+00:00 Late‐Holocene succession of dinoflagellates in an Antarctic fjord using a multi‐proxy approach: paleoenvironmental genomics, lipid biomarkers and palynomorphs BOERE, A. C. ABBAS, B. RIJPSTRA, W. I. C. VERSTEEGH, G. J. M. VOLKMAN, J. K. SINNINGHE DAMSTÉ, J. S. COOLEN, M. J. L. 2009 http://dx.doi.org/10.1111/j.1472-4669.2009.00202.x https://api.wiley.com/onlinelibrary/tdm/v1/articles/10.1111%2Fj.1472-4669.2009.00202.x https://onlinelibrary.wiley.com/doi/pdf/10.1111/j.1472-4669.2009.00202.x en eng Wiley http://onlinelibrary.wiley.com/termsAndConditions#vor Geobiology volume 7, issue 3, page 265-281 ISSN 1472-4677 1472-4669 journal-article 2009 crwiley https://doi.org/10.1111/j.1472-4669.2009.00202.x 2024-07-23T04:14:48Z Abstract Recent work has shown that paleoenvironmental genomics, i.e. the application of genomic tools to analyze preserved DNA in sedimentary records, is a promising approach to reconstruct the diversity of past planktonic communities. This provides information about past ecological and environmental changes. A major advantage of this approach is that individual species, including those that did not leave other characteristic markers, can be identified. In this study, we determined which dinoflagellate marker (i.e. 18S rDNA, dinosterol or dinocysts) provided the most detailed information about the late‐Holocene succession of dinoflagellates in an Antarctic Fjord (Ellis Fjord, Vestfold Hills). The preserved rDNA revealed two intervals in the 2750‐year‐old sediment record. The dinoflagellate diversity was the highest until ∼1850 cal yr bp and included phylotypes related to known dinosterol producers. A lower concentration of dinosterol in sediments <1850 cal yr bp coincided with a community shift towards a predominance of the autotrophic sea‐ice dinoflagellate Polarella glacialis , which is not a source of dinosterol. Remarkably, cultures of P. glacialis are known to produce other diagnostic sterols, but these were not recovered here. In addition, conspicuous resting cysts of P. glacialis were not preserved in the analyzed sediments. Overall, dinocysts were rare and the paleoenvironmental genomics approach revealed the highest diversity of dinoflagellates in Ellis Fjord, and was the only approach that recorded a shift in dinoflagellate composition at ∼1850 cal yr bp indicative of a colder climate with more extensive ice cover – this timing coincides with a period of changing climate reported for this region. Article in Journal/Newspaper Antarc* Antarctic Sea ice Wiley Online Library Geobiology 7 3 265 281
institution Open Polar
collection Wiley Online Library
op_collection_id crwiley
language English
description Abstract Recent work has shown that paleoenvironmental genomics, i.e. the application of genomic tools to analyze preserved DNA in sedimentary records, is a promising approach to reconstruct the diversity of past planktonic communities. This provides information about past ecological and environmental changes. A major advantage of this approach is that individual species, including those that did not leave other characteristic markers, can be identified. In this study, we determined which dinoflagellate marker (i.e. 18S rDNA, dinosterol or dinocysts) provided the most detailed information about the late‐Holocene succession of dinoflagellates in an Antarctic Fjord (Ellis Fjord, Vestfold Hills). The preserved rDNA revealed two intervals in the 2750‐year‐old sediment record. The dinoflagellate diversity was the highest until ∼1850 cal yr bp and included phylotypes related to known dinosterol producers. A lower concentration of dinosterol in sediments <1850 cal yr bp coincided with a community shift towards a predominance of the autotrophic sea‐ice dinoflagellate Polarella glacialis , which is not a source of dinosterol. Remarkably, cultures of P. glacialis are known to produce other diagnostic sterols, but these were not recovered here. In addition, conspicuous resting cysts of P. glacialis were not preserved in the analyzed sediments. Overall, dinocysts were rare and the paleoenvironmental genomics approach revealed the highest diversity of dinoflagellates in Ellis Fjord, and was the only approach that recorded a shift in dinoflagellate composition at ∼1850 cal yr bp indicative of a colder climate with more extensive ice cover – this timing coincides with a period of changing climate reported for this region.
format Article in Journal/Newspaper
author BOERE, A. C.
ABBAS, B.
RIJPSTRA, W. I. C.
VERSTEEGH, G. J. M.
VOLKMAN, J. K.
SINNINGHE DAMSTÉ, J. S.
COOLEN, M. J. L.
spellingShingle BOERE, A. C.
ABBAS, B.
RIJPSTRA, W. I. C.
VERSTEEGH, G. J. M.
VOLKMAN, J. K.
SINNINGHE DAMSTÉ, J. S.
COOLEN, M. J. L.
Late‐Holocene succession of dinoflagellates in an Antarctic fjord using a multi‐proxy approach: paleoenvironmental genomics, lipid biomarkers and palynomorphs
author_facet BOERE, A. C.
ABBAS, B.
RIJPSTRA, W. I. C.
VERSTEEGH, G. J. M.
VOLKMAN, J. K.
SINNINGHE DAMSTÉ, J. S.
COOLEN, M. J. L.
author_sort BOERE, A. C.
title Late‐Holocene succession of dinoflagellates in an Antarctic fjord using a multi‐proxy approach: paleoenvironmental genomics, lipid biomarkers and palynomorphs
title_short Late‐Holocene succession of dinoflagellates in an Antarctic fjord using a multi‐proxy approach: paleoenvironmental genomics, lipid biomarkers and palynomorphs
title_full Late‐Holocene succession of dinoflagellates in an Antarctic fjord using a multi‐proxy approach: paleoenvironmental genomics, lipid biomarkers and palynomorphs
title_fullStr Late‐Holocene succession of dinoflagellates in an Antarctic fjord using a multi‐proxy approach: paleoenvironmental genomics, lipid biomarkers and palynomorphs
title_full_unstemmed Late‐Holocene succession of dinoflagellates in an Antarctic fjord using a multi‐proxy approach: paleoenvironmental genomics, lipid biomarkers and palynomorphs
title_sort late‐holocene succession of dinoflagellates in an antarctic fjord using a multi‐proxy approach: paleoenvironmental genomics, lipid biomarkers and palynomorphs
publisher Wiley
publishDate 2009
url http://dx.doi.org/10.1111/j.1472-4669.2009.00202.x
https://api.wiley.com/onlinelibrary/tdm/v1/articles/10.1111%2Fj.1472-4669.2009.00202.x
https://onlinelibrary.wiley.com/doi/pdf/10.1111/j.1472-4669.2009.00202.x
genre Antarc*
Antarctic
Sea ice
genre_facet Antarc*
Antarctic
Sea ice
op_source Geobiology
volume 7, issue 3, page 265-281
ISSN 1472-4677 1472-4669
op_rights http://onlinelibrary.wiley.com/termsAndConditions#vor
op_doi https://doi.org/10.1111/j.1472-4669.2009.00202.x
container_title Geobiology
container_volume 7
container_issue 3
container_start_page 265
op_container_end_page 281
_version_ 1810496913914462208