hybridlab (version 1.0): a program for generating simulated hybrids from population samples

• Published in: Molecular Ecology Notes
• Main Authors: NIELSEN, EINAR EG, BACH, LARS ARVE, KOTLICKI, PIOTR
• Format: Article in Journal/Newspaper
• Language: English
• Published: Wiley 2006
• Subjects: atlantic cod
• Online Access: http://dx.doi.org/10.1111/j.1471-8286.2006.01433.x; https://api.wiley.com/onlinelibrary/tdm/v1/articles/10.1111%2Fj.1471-8286.2006.01433.x; https://onlinelibrary.wiley.com/doi/pdf/10.1111/j.1471-8286.2006.01433.x

Abstract We present the computer program hybridlab 1.0 for simulating intraspecific hybrids from population samples of nuclear genetic markers such as microsatellites, allozymes or SNPs (single nucleotide polymorphisms). The program generates a user‐specified number of multilocus F1 hybrid genotypes between any pair of potentially hybridizing populations included in a standard input‐file of multilocus genotypes for population genetic analysis. This simple, user‐friendly program has a wide range of applications for studying natural and artificial hybridization; in particular, for evaluating the statistical power for individual assignment of parental and hybrid individuals. An example of application for Atlantic cod populations is given.