Seventy‐five EST‐linked Atlantic salmon ( Salmo salar L.) microsatellite markers and their cross‐amplification in five salmonid species
Abstract An Atlantic salmon ( Salmo salar L.) expressed sequence tag (EST) database consisting of 58 146 ESTs was screened for microsatellite sequences. Subsequent development of 75 polymorphic EST‐associated microsatellite markers in this species is described together with cross‐species amplificati...
Published in: | Molecular Ecology Notes |
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crwiley:10.1111/j.1471-8286.2005.00902.x 2024-06-02T08:03:20+00:00 Seventy‐five EST‐linked Atlantic salmon ( Salmo salar L.) microsatellite markers and their cross‐amplification in five salmonid species VASEMÄGI, ANTI NILSSON, JAN PRIMMER, CRAIG R. 2005 http://dx.doi.org/10.1111/j.1471-8286.2005.00902.x https://api.wiley.com/onlinelibrary/tdm/v1/articles/10.1111%2Fj.1471-8286.2005.00902.x https://onlinelibrary.wiley.com/doi/pdf/10.1111/j.1471-8286.2005.00902.x en eng Wiley http://onlinelibrary.wiley.com/termsAndConditions#vor Molecular Ecology Notes volume 5, issue 2, page 282-288 ISSN 1471-8278 1471-8286 journal-article 2005 crwiley https://doi.org/10.1111/j.1471-8286.2005.00902.x 2024-05-03T11:17:01Z Abstract An Atlantic salmon ( Salmo salar L.) expressed sequence tag (EST) database consisting of 58 146 ESTs was screened for microsatellite sequences. Subsequent development of 75 polymorphic EST‐associated microsatellite markers in this species is described together with cross‐species amplification results of 133 gene‐associated tandem repeat markers in five salmonid species ( Salmo trutta, Oncorhynchus mykiss , Salvelinus aplinus , Thymallus thymallus , Coregonus lavaretus ). The number of alleles among EST‐linked microsatellites in Atlantic salmon ranged from two to 41 with an average of 12 alleles per locus. Cross‐species amplification resulted in detection of a total of 111 polymorphic locus‐species combinations (12–32 loci per species). Article in Journal/Newspaper Atlantic salmon Salmo salar Wiley Online Library Molecular Ecology Notes 5 2 282 288 |
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Open Polar |
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Wiley Online Library |
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crwiley |
language |
English |
description |
Abstract An Atlantic salmon ( Salmo salar L.) expressed sequence tag (EST) database consisting of 58 146 ESTs was screened for microsatellite sequences. Subsequent development of 75 polymorphic EST‐associated microsatellite markers in this species is described together with cross‐species amplification results of 133 gene‐associated tandem repeat markers in five salmonid species ( Salmo trutta, Oncorhynchus mykiss , Salvelinus aplinus , Thymallus thymallus , Coregonus lavaretus ). The number of alleles among EST‐linked microsatellites in Atlantic salmon ranged from two to 41 with an average of 12 alleles per locus. Cross‐species amplification resulted in detection of a total of 111 polymorphic locus‐species combinations (12–32 loci per species). |
format |
Article in Journal/Newspaper |
author |
VASEMÄGI, ANTI NILSSON, JAN PRIMMER, CRAIG R. |
spellingShingle |
VASEMÄGI, ANTI NILSSON, JAN PRIMMER, CRAIG R. Seventy‐five EST‐linked Atlantic salmon ( Salmo salar L.) microsatellite markers and their cross‐amplification in five salmonid species |
author_facet |
VASEMÄGI, ANTI NILSSON, JAN PRIMMER, CRAIG R. |
author_sort |
VASEMÄGI, ANTI |
title |
Seventy‐five EST‐linked Atlantic salmon ( Salmo salar L.) microsatellite markers and their cross‐amplification in five salmonid species |
title_short |
Seventy‐five EST‐linked Atlantic salmon ( Salmo salar L.) microsatellite markers and their cross‐amplification in five salmonid species |
title_full |
Seventy‐five EST‐linked Atlantic salmon ( Salmo salar L.) microsatellite markers and their cross‐amplification in five salmonid species |
title_fullStr |
Seventy‐five EST‐linked Atlantic salmon ( Salmo salar L.) microsatellite markers and their cross‐amplification in five salmonid species |
title_full_unstemmed |
Seventy‐five EST‐linked Atlantic salmon ( Salmo salar L.) microsatellite markers and their cross‐amplification in five salmonid species |
title_sort |
seventy‐five est‐linked atlantic salmon ( salmo salar l.) microsatellite markers and their cross‐amplification in five salmonid species |
publisher |
Wiley |
publishDate |
2005 |
url |
http://dx.doi.org/10.1111/j.1471-8286.2005.00902.x https://api.wiley.com/onlinelibrary/tdm/v1/articles/10.1111%2Fj.1471-8286.2005.00902.x https://onlinelibrary.wiley.com/doi/pdf/10.1111/j.1471-8286.2005.00902.x |
genre |
Atlantic salmon Salmo salar |
genre_facet |
Atlantic salmon Salmo salar |
op_source |
Molecular Ecology Notes volume 5, issue 2, page 282-288 ISSN 1471-8278 1471-8286 |
op_rights |
http://onlinelibrary.wiley.com/termsAndConditions#vor |
op_doi |
https://doi.org/10.1111/j.1471-8286.2005.00902.x |
container_title |
Molecular Ecology Notes |
container_volume |
5 |
container_issue |
2 |
container_start_page |
282 |
op_container_end_page |
288 |
_version_ |
1800747836556443648 |