Microbial biodiversity of thermophilic communities in hot mineral soils of Tramway Ridge, Mount Erebus, Antarctica

Summary Tramway Ridge, located near the summit of Mount Erebus in Antarctica, is probably the most remote geothermal soil habitat on Earth. Steam fumaroles maintain moist, hot soil environments creating extreme local physicochemical differentials. In this study a culture‐independent approach combini...

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Published in:Environmental Microbiology
Main Authors: Soo, Rochelle M., Wood, Susanna A., Grzymski, Joseph J., McDonald, Ian R., Cary, S. Craig
Format: Article in Journal/Newspaper
Language:English
Published: Wiley 2009
Subjects:
Online Access:http://dx.doi.org/10.1111/j.1462-2920.2009.01859.x
https://api.wiley.com/onlinelibrary/tdm/v1/articles/10.1111%2Fj.1462-2920.2009.01859.x
http://onlinelibrary.wiley.com/wol1/doi/10.1111/j.1462-2920.2009.01859.x/fullpdf
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spelling crwiley:10.1111/j.1462-2920.2009.01859.x 2024-10-13T14:03:19+00:00 Microbial biodiversity of thermophilic communities in hot mineral soils of Tramway Ridge, Mount Erebus, Antarctica Soo, Rochelle M. Wood, Susanna A. Grzymski, Joseph J. McDonald, Ian R. Cary, S. Craig 2009 http://dx.doi.org/10.1111/j.1462-2920.2009.01859.x https://api.wiley.com/onlinelibrary/tdm/v1/articles/10.1111%2Fj.1462-2920.2009.01859.x http://onlinelibrary.wiley.com/wol1/doi/10.1111/j.1462-2920.2009.01859.x/fullpdf en eng Wiley http://onlinelibrary.wiley.com/termsAndConditions#vor Environmental Microbiology volume 11, issue 3, page 715-728 ISSN 1462-2912 1462-2920 journal-article 2009 crwiley https://doi.org/10.1111/j.1462-2920.2009.01859.x 2024-09-23T04:36:29Z Summary Tramway Ridge, located near the summit of Mount Erebus in Antarctica, is probably the most remote geothermal soil habitat on Earth. Steam fumaroles maintain moist, hot soil environments creating extreme local physicochemical differentials. In this study a culture‐independent approach combining automated rRNA intergenic spacer analysis (ARISA) and a 16S rRNA gene library was used to characterize soil microbial (Bacterial and Archaeal) diversity along intense physicochemical gradients. Statistical analysis of ARISA data showed a clear delineation between bacterial community structure at sites close to fumaroles and all other sites. Temperature and pH were identified as the primary drivers of this demarcation. A clone library constructed from a high‐temperature site led to the identification of 18 novel bacterial operational taxonomic units (OTUs). All 16S rRNA gene sequences were deep branching and distantly (85–93%) related to other environmental clones. Five of the signatures branched with an unknown group between candidate division OP10 and Chloroflexi . Within this clade, sequence similarity was low, suggesting it contains several yet‐to‐be described bacterial groups. Five archaeal OTUs were obtained and exhibited high levels of sequence similarity (95–97%) with Crenarchaeota sourced from deep‐subsurface environments on two distant continents. The novel bacterial assemblage coupled with the unique archaeal affinities reinvigorates the hypotheses that Tramway Ridge organisms are relics of archaic microbial lineages specifically adapted to survive in this harsh environment and that this site may provide a portal to the deep‐subsurface biosphere. Article in Journal/Newspaper Antarc* Antarctica Wiley Online Library Mount Erebus ENVELOPE(167.167,167.167,-77.533,-77.533) Tramway Ridge ENVELOPE(167.100,167.100,-77.517,-77.517) Environmental Microbiology 11 3 715 728
institution Open Polar
collection Wiley Online Library
op_collection_id crwiley
language English
description Summary Tramway Ridge, located near the summit of Mount Erebus in Antarctica, is probably the most remote geothermal soil habitat on Earth. Steam fumaroles maintain moist, hot soil environments creating extreme local physicochemical differentials. In this study a culture‐independent approach combining automated rRNA intergenic spacer analysis (ARISA) and a 16S rRNA gene library was used to characterize soil microbial (Bacterial and Archaeal) diversity along intense physicochemical gradients. Statistical analysis of ARISA data showed a clear delineation between bacterial community structure at sites close to fumaroles and all other sites. Temperature and pH were identified as the primary drivers of this demarcation. A clone library constructed from a high‐temperature site led to the identification of 18 novel bacterial operational taxonomic units (OTUs). All 16S rRNA gene sequences were deep branching and distantly (85–93%) related to other environmental clones. Five of the signatures branched with an unknown group between candidate division OP10 and Chloroflexi . Within this clade, sequence similarity was low, suggesting it contains several yet‐to‐be described bacterial groups. Five archaeal OTUs were obtained and exhibited high levels of sequence similarity (95–97%) with Crenarchaeota sourced from deep‐subsurface environments on two distant continents. The novel bacterial assemblage coupled with the unique archaeal affinities reinvigorates the hypotheses that Tramway Ridge organisms are relics of archaic microbial lineages specifically adapted to survive in this harsh environment and that this site may provide a portal to the deep‐subsurface biosphere.
format Article in Journal/Newspaper
author Soo, Rochelle M.
Wood, Susanna A.
Grzymski, Joseph J.
McDonald, Ian R.
Cary, S. Craig
spellingShingle Soo, Rochelle M.
Wood, Susanna A.
Grzymski, Joseph J.
McDonald, Ian R.
Cary, S. Craig
Microbial biodiversity of thermophilic communities in hot mineral soils of Tramway Ridge, Mount Erebus, Antarctica
author_facet Soo, Rochelle M.
Wood, Susanna A.
Grzymski, Joseph J.
McDonald, Ian R.
Cary, S. Craig
author_sort Soo, Rochelle M.
title Microbial biodiversity of thermophilic communities in hot mineral soils of Tramway Ridge, Mount Erebus, Antarctica
title_short Microbial biodiversity of thermophilic communities in hot mineral soils of Tramway Ridge, Mount Erebus, Antarctica
title_full Microbial biodiversity of thermophilic communities in hot mineral soils of Tramway Ridge, Mount Erebus, Antarctica
title_fullStr Microbial biodiversity of thermophilic communities in hot mineral soils of Tramway Ridge, Mount Erebus, Antarctica
title_full_unstemmed Microbial biodiversity of thermophilic communities in hot mineral soils of Tramway Ridge, Mount Erebus, Antarctica
title_sort microbial biodiversity of thermophilic communities in hot mineral soils of tramway ridge, mount erebus, antarctica
publisher Wiley
publishDate 2009
url http://dx.doi.org/10.1111/j.1462-2920.2009.01859.x
https://api.wiley.com/onlinelibrary/tdm/v1/articles/10.1111%2Fj.1462-2920.2009.01859.x
http://onlinelibrary.wiley.com/wol1/doi/10.1111/j.1462-2920.2009.01859.x/fullpdf
long_lat ENVELOPE(167.167,167.167,-77.533,-77.533)
ENVELOPE(167.100,167.100,-77.517,-77.517)
geographic Mount Erebus
Tramway Ridge
geographic_facet Mount Erebus
Tramway Ridge
genre Antarc*
Antarctica
genre_facet Antarc*
Antarctica
op_source Environmental Microbiology
volume 11, issue 3, page 715-728
ISSN 1462-2912 1462-2920
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op_doi https://doi.org/10.1111/j.1462-2920.2009.01859.x
container_title Environmental Microbiology
container_volume 11
container_issue 3
container_start_page 715
op_container_end_page 728
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