Identifying microbial life in rocks: Insights from population morphometry

Abstract The identification of cellular life in the rock record is problematic, since microbial life forms, and particularly bacteria, lack sufficient morphologic complexity to be effectively distinguished from certain abiogenic features in rocks. Examples include organic pore‐fillings, hydrocarbon‐...

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Published in:Geobiology
Main Authors: Rouillard, Joti, García-Ruiz, Juan Manuel, Kah, Linda, Gérard, Emmanuelle, Barrier, Laurie, Nabhan, Sami, Gong, Jian, van Zuilen, Mark A.
Other Authors: Horizon 2020, Seventh Framework Programme, Ministerio de Economía y Competitividad
Format: Article in Journal/Newspaper
Language:English
Published: Wiley 2019
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Online Access:http://dx.doi.org/10.1111/gbi.12377
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spelling crwiley:10.1111/gbi.12377 2024-06-02T08:03:50+00:00 Identifying microbial life in rocks: Insights from population morphometry Rouillard, Joti García-Ruiz, Juan Manuel Kah, Linda Gérard, Emmanuelle Barrier, Laurie Nabhan, Sami Gong, Jian van Zuilen, Mark A. Horizon 2020 Seventh Framework Programme Ministerio de Economía y Competitividad 2019 http://dx.doi.org/10.1111/gbi.12377 https://api.wiley.com/onlinelibrary/tdm/v1/articles/10.1111%2Fgbi.12377 https://onlinelibrary.wiley.com/doi/pdf/10.1111/gbi.12377 https://onlinelibrary.wiley.com/doi/full-xml/10.1111/gbi.12377 en eng Wiley http://creativecommons.org/licenses/by/4.0/ Geobiology volume 18, issue 3, page 282-305 ISSN 1472-4677 1472-4669 journal-article 2019 crwiley https://doi.org/10.1111/gbi.12377 2024-05-03T11:31:29Z Abstract The identification of cellular life in the rock record is problematic, since microbial life forms, and particularly bacteria, lack sufficient morphologic complexity to be effectively distinguished from certain abiogenic features in rocks. Examples include organic pore‐fillings, hydrocarbon‐containing fluid inclusions, organic coatings on exfoliated crystals and biomimetic mineral aggregates (biomorphs). This has led to the interpretation and re‐interpretation of individual microstructures in the rock record. The morphologic description of entire populations of microstructures, however, may provide support for distinguishing between preserved micro‐organisms and abiogenic objects. Here, we present a statistical approach based on quantitative morphological description of populations of microstructures. Images of modern microbial populations were compared to images of two relevant types of abiogenic microstructures: interstitial spaces and silica–carbonate biomorphs. For the populations of these three systems, the size, circularity, and solidity of individual particles were calculated. Subsequently, the mean/ SD , skewness, and kurtosis of the statistical distributions of these parameters were established. This allowed the qualitative and quantitative comparison of distributions in these three systems. In addition, the fractal dimension and lacunarity of the populations were determined. In total, 11 parameters, independent of absolute size or shape, were used to characterize each population of microstructures. Using discriminant analysis with parameter subsets, it was found that size and shape distributions are typically sufficient to discriminate populations of biologic and abiogenic microstructures. Analysis of ancient, yet unambiguously biologic, samples (1.0 Ga Angmaat Formation, Baffin Island, Canada) suggests that taphonomic effects can alter morphometric characteristics and complicate image analysis; therefore, a wider range of microfossil assemblages should be studied in the future before automated ... Article in Journal/Newspaper Baffin Island Baffin Wiley Online Library Baffin Island Canada Geobiology 18 3 282 305
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description Abstract The identification of cellular life in the rock record is problematic, since microbial life forms, and particularly bacteria, lack sufficient morphologic complexity to be effectively distinguished from certain abiogenic features in rocks. Examples include organic pore‐fillings, hydrocarbon‐containing fluid inclusions, organic coatings on exfoliated crystals and biomimetic mineral aggregates (biomorphs). This has led to the interpretation and re‐interpretation of individual microstructures in the rock record. The morphologic description of entire populations of microstructures, however, may provide support for distinguishing between preserved micro‐organisms and abiogenic objects. Here, we present a statistical approach based on quantitative morphological description of populations of microstructures. Images of modern microbial populations were compared to images of two relevant types of abiogenic microstructures: interstitial spaces and silica–carbonate biomorphs. For the populations of these three systems, the size, circularity, and solidity of individual particles were calculated. Subsequently, the mean/ SD , skewness, and kurtosis of the statistical distributions of these parameters were established. This allowed the qualitative and quantitative comparison of distributions in these three systems. In addition, the fractal dimension and lacunarity of the populations were determined. In total, 11 parameters, independent of absolute size or shape, were used to characterize each population of microstructures. Using discriminant analysis with parameter subsets, it was found that size and shape distributions are typically sufficient to discriminate populations of biologic and abiogenic microstructures. Analysis of ancient, yet unambiguously biologic, samples (1.0 Ga Angmaat Formation, Baffin Island, Canada) suggests that taphonomic effects can alter morphometric characteristics and complicate image analysis; therefore, a wider range of microfossil assemblages should be studied in the future before automated ...
author2 Horizon 2020
Seventh Framework Programme
Ministerio de Economía y Competitividad
format Article in Journal/Newspaper
author Rouillard, Joti
García-Ruiz, Juan Manuel
Kah, Linda
Gérard, Emmanuelle
Barrier, Laurie
Nabhan, Sami
Gong, Jian
van Zuilen, Mark A.
spellingShingle Rouillard, Joti
García-Ruiz, Juan Manuel
Kah, Linda
Gérard, Emmanuelle
Barrier, Laurie
Nabhan, Sami
Gong, Jian
van Zuilen, Mark A.
Identifying microbial life in rocks: Insights from population morphometry
author_facet Rouillard, Joti
García-Ruiz, Juan Manuel
Kah, Linda
Gérard, Emmanuelle
Barrier, Laurie
Nabhan, Sami
Gong, Jian
van Zuilen, Mark A.
author_sort Rouillard, Joti
title Identifying microbial life in rocks: Insights from population morphometry
title_short Identifying microbial life in rocks: Insights from population morphometry
title_full Identifying microbial life in rocks: Insights from population morphometry
title_fullStr Identifying microbial life in rocks: Insights from population morphometry
title_full_unstemmed Identifying microbial life in rocks: Insights from population morphometry
title_sort identifying microbial life in rocks: insights from population morphometry
publisher Wiley
publishDate 2019
url http://dx.doi.org/10.1111/gbi.12377
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https://onlinelibrary.wiley.com/doi/pdf/10.1111/gbi.12377
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volume 18, issue 3, page 282-305
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