Population genetic structure of Sorex unguiculatusand Sorex caecutiens(Soricidae, Mammalia) in Hokkaido, based on microsatellite DNA polymorphism

Abstract We investigated the genetic structure of Sorex unguiculatus and Sorex caecutiens populations in Hokkaido, Japan, using hypervariable microsatellite DNA markers. We used five microsatellite loci to type 475 S. unguiculatus individuals from 20 localities on the Hokkaido mainland and four loca...

Full description

Bibliographic Details
Published in:Ecological Research
Main Authors: Naitoh, Yukako, Ohdachi, Satoshi D.
Format: Article in Journal/Newspaper
Language:English
Published: Wiley 2006
Subjects:
Online Access:http://dx.doi.org/10.1007/s11284-006-0154-1
http://www.springerlink.com/index/pdf/10.1007/s11284-006-0154-1
id crwiley:10.1007/s11284-006-0154-1
record_format openpolar
spelling crwiley:10.1007/s11284-006-0154-1 2024-06-02T08:13:56+00:00 Population genetic structure of Sorex unguiculatusand Sorex caecutiens(Soricidae, Mammalia) in Hokkaido, based on microsatellite DNA polymorphism Naitoh, Yukako Ohdachi, Satoshi D. 2006 http://dx.doi.org/10.1007/s11284-006-0154-1 http://www.springerlink.com/index/pdf/10.1007/s11284-006-0154-1 en eng Wiley http://onlinelibrary.wiley.com/termsAndConditions#vor Ecological Research volume 21, issue 4, page 586-596 ISSN 0912-3814 1440-1703 journal-article 2006 crwiley https://doi.org/10.1007/s11284-006-0154-1 2024-05-03T11:41:56Z Abstract We investigated the genetic structure of Sorex unguiculatus and Sorex caecutiens populations in Hokkaido, Japan, using hypervariable microsatellite DNA markers. We used five microsatellite loci to type 475 S. unguiculatus individuals from 20 localities on the Hokkaido mainland and four localities from each of four offshore islands (and 11 shrews from one locality in southern Sakhalin for a particular analysis). We used six microsatellite loci to type 240 S. caecutiens individuals from 13 localities on the Hokkaido mainland. Genetic variation was high in mainland populations of both species and low in the island populations of S. unguiculatus . Allelic richness and island size were positively correlated for S. unguiculatus , suggesting that genetic drift occurred on those islands due to small population size. In addition, four insular populations of S. unguiculatus were genetically differentiated from the mainland populations, although clear phylogeographic clustering was not confirmed among populations on the Hokkaido mainland for either S. unguiculatus or S. caecutiens . Heterozygosity excess was observed in more than half of the populations including the mainland populations of the two species, suggesting recent bottleneck events in these populations. Population dynamics of the shrews might be explained by a metapopulation scheme. According to autocorrelation analysis, the extent of non‐random spatial genetic structure was approximately 100 km. Isolation by distance was observed in S. unguiculatus , but not in S. caecutiens although there is a positive trend. The lack of correlation for S. caecutiens might have been due to small sample size. Thus, no obvious differences in population genetic structure were found between the two species on the Hokkaido mainland in the present study, while previous investigations using mitochondrial DNA sequences inferred that these two species might have rather different biogeographic histories. Article in Journal/Newspaper Sakhalin Wiley Online Library Ecological Research 21 4 586 596
institution Open Polar
collection Wiley Online Library
op_collection_id crwiley
language English
description Abstract We investigated the genetic structure of Sorex unguiculatus and Sorex caecutiens populations in Hokkaido, Japan, using hypervariable microsatellite DNA markers. We used five microsatellite loci to type 475 S. unguiculatus individuals from 20 localities on the Hokkaido mainland and four localities from each of four offshore islands (and 11 shrews from one locality in southern Sakhalin for a particular analysis). We used six microsatellite loci to type 240 S. caecutiens individuals from 13 localities on the Hokkaido mainland. Genetic variation was high in mainland populations of both species and low in the island populations of S. unguiculatus . Allelic richness and island size were positively correlated for S. unguiculatus , suggesting that genetic drift occurred on those islands due to small population size. In addition, four insular populations of S. unguiculatus were genetically differentiated from the mainland populations, although clear phylogeographic clustering was not confirmed among populations on the Hokkaido mainland for either S. unguiculatus or S. caecutiens . Heterozygosity excess was observed in more than half of the populations including the mainland populations of the two species, suggesting recent bottleneck events in these populations. Population dynamics of the shrews might be explained by a metapopulation scheme. According to autocorrelation analysis, the extent of non‐random spatial genetic structure was approximately 100 km. Isolation by distance was observed in S. unguiculatus , but not in S. caecutiens although there is a positive trend. The lack of correlation for S. caecutiens might have been due to small sample size. Thus, no obvious differences in population genetic structure were found between the two species on the Hokkaido mainland in the present study, while previous investigations using mitochondrial DNA sequences inferred that these two species might have rather different biogeographic histories.
format Article in Journal/Newspaper
author Naitoh, Yukako
Ohdachi, Satoshi D.
spellingShingle Naitoh, Yukako
Ohdachi, Satoshi D.
Population genetic structure of Sorex unguiculatusand Sorex caecutiens(Soricidae, Mammalia) in Hokkaido, based on microsatellite DNA polymorphism
author_facet Naitoh, Yukako
Ohdachi, Satoshi D.
author_sort Naitoh, Yukako
title Population genetic structure of Sorex unguiculatusand Sorex caecutiens(Soricidae, Mammalia) in Hokkaido, based on microsatellite DNA polymorphism
title_short Population genetic structure of Sorex unguiculatusand Sorex caecutiens(Soricidae, Mammalia) in Hokkaido, based on microsatellite DNA polymorphism
title_full Population genetic structure of Sorex unguiculatusand Sorex caecutiens(Soricidae, Mammalia) in Hokkaido, based on microsatellite DNA polymorphism
title_fullStr Population genetic structure of Sorex unguiculatusand Sorex caecutiens(Soricidae, Mammalia) in Hokkaido, based on microsatellite DNA polymorphism
title_full_unstemmed Population genetic structure of Sorex unguiculatusand Sorex caecutiens(Soricidae, Mammalia) in Hokkaido, based on microsatellite DNA polymorphism
title_sort population genetic structure of sorex unguiculatusand sorex caecutiens(soricidae, mammalia) in hokkaido, based on microsatellite dna polymorphism
publisher Wiley
publishDate 2006
url http://dx.doi.org/10.1007/s11284-006-0154-1
http://www.springerlink.com/index/pdf/10.1007/s11284-006-0154-1
genre Sakhalin
genre_facet Sakhalin
op_source Ecological Research
volume 21, issue 4, page 586-596
ISSN 0912-3814 1440-1703
op_rights http://onlinelibrary.wiley.com/termsAndConditions#vor
op_doi https://doi.org/10.1007/s11284-006-0154-1
container_title Ecological Research
container_volume 21
container_issue 4
container_start_page 586
op_container_end_page 596
_version_ 1800737596019572736