A revised subfamilial classification of Polypodiaceae based on plastome, nuclear ribosomal, and morphological evidence

Abstract The polygrammoid fern family Polypodiaceae represents one of the most diversified epiphytic fern groups, with more than 1600 species distributed on all continents except Antarctica, with the highest species diversity in tropical and subtropical regions. Despite progress in recent phylogenet...

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Published in:TAXON
Main Authors: Wei, Ran, Zhang, Xian‐Chun
Format: Article in Journal/Newspaper
Language:English
Published: Wiley 2022
Subjects:
Online Access:http://dx.doi.org/10.1002/tax.12658
https://onlinelibrary.wiley.com/doi/pdf/10.1002/tax.12658
https://onlinelibrary.wiley.com/doi/full-xml/10.1002/tax.12658
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spelling crwiley:10.1002/tax.12658 2024-06-09T07:40:59+00:00 A revised subfamilial classification of Polypodiaceae based on plastome, nuclear ribosomal, and morphological evidence Wei, Ran Zhang, Xian‐Chun 2022 http://dx.doi.org/10.1002/tax.12658 https://onlinelibrary.wiley.com/doi/pdf/10.1002/tax.12658 https://onlinelibrary.wiley.com/doi/full-xml/10.1002/tax.12658 en eng Wiley http://onlinelibrary.wiley.com/termsAndConditions#vor TAXON volume 71, issue 2, page 288-306 ISSN 0040-0262 1996-8175 journal-article 2022 crwiley https://doi.org/10.1002/tax.12658 2024-05-16T14:25:51Z Abstract The polygrammoid fern family Polypodiaceae represents one of the most diversified epiphytic fern groups, with more than 1600 species distributed on all continents except Antarctica, with the highest species diversity in tropical and subtropical regions. Despite progress in recent phylogenetic studies of Polypodiaceae, the infrafamilial classification of this group of ferns is still problematic. Here, we explore the phylogenetic relationship within Polypodiaceae using plastid genome (plastome) and nuclear ribosomal cistron genome data obtained from high‐throughput sequencing. Although genome skimming data strongly support the monophyly of many genera and clades of Polypodiaceae, relationships within some clades and along the backbone of the phylogeny remain incongruent between plastome and nuclear data. The explanation is possibly a factor of complex evolutionary history found in these clades, such as rapid radiation, incomplete lineage sorting, ancient hybridization, and recent introgression. Based on the concatenated dataset, our phylogenetic analyses support nine major clades in Polypodiaceae, which merit the recognition as subfamilies, Crypsinoideae, Grammitidoideae, Loxogrammoideae, Microsoroideae, Platycerioideae, Polypodioideae, Adetogrammoideae, Campyloneuroideae, and Serpocauloideae, while the latter three are separated from Polypodioideae as new subfamilies. All of these infrafamilial divisions, identified with molecular data, are further supported by non‐molecular features including leaf dissection, venation, scales and paraphyses, soral features, and geographical distributions. Systematic and taxonomic discussions on the subfamilial treatment are also provided. Article in Journal/Newspaper Antarc* Antarctica Wiley Online Library TAXON 71 2 288 306
institution Open Polar
collection Wiley Online Library
op_collection_id crwiley
language English
description Abstract The polygrammoid fern family Polypodiaceae represents one of the most diversified epiphytic fern groups, with more than 1600 species distributed on all continents except Antarctica, with the highest species diversity in tropical and subtropical regions. Despite progress in recent phylogenetic studies of Polypodiaceae, the infrafamilial classification of this group of ferns is still problematic. Here, we explore the phylogenetic relationship within Polypodiaceae using plastid genome (plastome) and nuclear ribosomal cistron genome data obtained from high‐throughput sequencing. Although genome skimming data strongly support the monophyly of many genera and clades of Polypodiaceae, relationships within some clades and along the backbone of the phylogeny remain incongruent between plastome and nuclear data. The explanation is possibly a factor of complex evolutionary history found in these clades, such as rapid radiation, incomplete lineage sorting, ancient hybridization, and recent introgression. Based on the concatenated dataset, our phylogenetic analyses support nine major clades in Polypodiaceae, which merit the recognition as subfamilies, Crypsinoideae, Grammitidoideae, Loxogrammoideae, Microsoroideae, Platycerioideae, Polypodioideae, Adetogrammoideae, Campyloneuroideae, and Serpocauloideae, while the latter three are separated from Polypodioideae as new subfamilies. All of these infrafamilial divisions, identified with molecular data, are further supported by non‐molecular features including leaf dissection, venation, scales and paraphyses, soral features, and geographical distributions. Systematic and taxonomic discussions on the subfamilial treatment are also provided.
format Article in Journal/Newspaper
author Wei, Ran
Zhang, Xian‐Chun
spellingShingle Wei, Ran
Zhang, Xian‐Chun
A revised subfamilial classification of Polypodiaceae based on plastome, nuclear ribosomal, and morphological evidence
author_facet Wei, Ran
Zhang, Xian‐Chun
author_sort Wei, Ran
title A revised subfamilial classification of Polypodiaceae based on plastome, nuclear ribosomal, and morphological evidence
title_short A revised subfamilial classification of Polypodiaceae based on plastome, nuclear ribosomal, and morphological evidence
title_full A revised subfamilial classification of Polypodiaceae based on plastome, nuclear ribosomal, and morphological evidence
title_fullStr A revised subfamilial classification of Polypodiaceae based on plastome, nuclear ribosomal, and morphological evidence
title_full_unstemmed A revised subfamilial classification of Polypodiaceae based on plastome, nuclear ribosomal, and morphological evidence
title_sort revised subfamilial classification of polypodiaceae based on plastome, nuclear ribosomal, and morphological evidence
publisher Wiley
publishDate 2022
url http://dx.doi.org/10.1002/tax.12658
https://onlinelibrary.wiley.com/doi/pdf/10.1002/tax.12658
https://onlinelibrary.wiley.com/doi/full-xml/10.1002/tax.12658
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Antarctica
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Antarctica
op_source TAXON
volume 71, issue 2, page 288-306
ISSN 0040-0262 1996-8175
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op_doi https://doi.org/10.1002/tax.12658
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