Lignin phenol quantification from machine learning‐assisted decomposition of liquid chromatography‐absorbance spectroscopy data

Abstract Analysis of lignin in seawater is essential to understanding the fate of terrestrial dissolved organic matter (DOM) in the ocean and its role in the carbon cycle. Lignin is typically quantified by gas or liquid chromatography, coupled with mass spectrometry (GC‐MS or LC‐MS). MS instrumentat...

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Published in:Limnology and Oceanography: Methods
Main Authors: Bruhn, Anders Dalhoff, Wünsch, Urban, Osburn, Christopher L., Rudolph, Jacob C., Stedmon, Colin A.
Other Authors: Danmarks Frie Forskningsfond, National Science Foundation
Format: Article in Journal/Newspaper
Language:English
Published: Wiley 2023
Subjects:
Online Access:http://dx.doi.org/10.1002/lom3.10561
https://aslopubs.onlinelibrary.wiley.com/doi/pdf/10.1002/lom3.10561
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spelling crwiley:10.1002/lom3.10561 2024-09-15T18:03:32+00:00 Lignin phenol quantification from machine learning‐assisted decomposition of liquid chromatography‐absorbance spectroscopy data Bruhn, Anders Dalhoff Wünsch, Urban Osburn, Christopher L. Rudolph, Jacob C. Stedmon, Colin A. Danmarks Frie Forskningsfond National Science Foundation 2023 http://dx.doi.org/10.1002/lom3.10561 https://aslopubs.onlinelibrary.wiley.com/doi/pdf/10.1002/lom3.10561 en eng Wiley http://creativecommons.org/licenses/by/4.0/ http://creativecommons.org/licenses/by/4.0/ Limnology and Oceanography: Methods volume 21, issue 8, page 508-528 ISSN 1541-5856 1541-5856 journal-article 2023 crwiley https://doi.org/10.1002/lom3.10561 2024-08-30T04:12:57Z Abstract Analysis of lignin in seawater is essential to understanding the fate of terrestrial dissolved organic matter (DOM) in the ocean and its role in the carbon cycle. Lignin is typically quantified by gas or liquid chromatography, coupled with mass spectrometry (GC‐MS or LC‐MS). MS instrumentation can be relatively expensive to purchase and maintain. Here we present an improved approach for quantification of lignin phenols using LC and absorbance detection. The approach applies a modified version of parallel factor analysis (PARAFAC2) to 2 nd derivative absorbance chromatograms. It is capable of isolating individual elution profiles of analytes despite co‐elution and overall improves sensitivity and specificity, compared to manual integration methods. For most lignin phenols, detection limits below 5 nmol L −1 were achieved, which is comparable to MS detection. The reproducibility across all laboratory stages for our reference material showed a relative standard deviation between 1.47% and 16.84% for all 11 lignin phenols. Changing the amount of DOM in the reaction vessel for the oxidation (dissolved organic carbon between 22 and 367 mmol L −1 ), did not significantly affect the final lignin phenol composition. The new method was applied to seawater samples from the Kattegat and Davis Strait. The total concentration of dissolved lignin phenols measured in the two areas was between 4.3–10.1 and 2.1–3.2 nmol L −1 , respectively, which is within the range found by other studies. Comparison with a different oxidation approach and detection method (GC‐MS) gave similar results and underline the potential of LC and absorbance detection for analysis of dissolved lignin with our proposed method. Article in Journal/Newspaper Davis Strait Wiley Online Library Limnology and Oceanography: Methods 21 8 508 528
institution Open Polar
collection Wiley Online Library
op_collection_id crwiley
language English
description Abstract Analysis of lignin in seawater is essential to understanding the fate of terrestrial dissolved organic matter (DOM) in the ocean and its role in the carbon cycle. Lignin is typically quantified by gas or liquid chromatography, coupled with mass spectrometry (GC‐MS or LC‐MS). MS instrumentation can be relatively expensive to purchase and maintain. Here we present an improved approach for quantification of lignin phenols using LC and absorbance detection. The approach applies a modified version of parallel factor analysis (PARAFAC2) to 2 nd derivative absorbance chromatograms. It is capable of isolating individual elution profiles of analytes despite co‐elution and overall improves sensitivity and specificity, compared to manual integration methods. For most lignin phenols, detection limits below 5 nmol L −1 were achieved, which is comparable to MS detection. The reproducibility across all laboratory stages for our reference material showed a relative standard deviation between 1.47% and 16.84% for all 11 lignin phenols. Changing the amount of DOM in the reaction vessel for the oxidation (dissolved organic carbon between 22 and 367 mmol L −1 ), did not significantly affect the final lignin phenol composition. The new method was applied to seawater samples from the Kattegat and Davis Strait. The total concentration of dissolved lignin phenols measured in the two areas was between 4.3–10.1 and 2.1–3.2 nmol L −1 , respectively, which is within the range found by other studies. Comparison with a different oxidation approach and detection method (GC‐MS) gave similar results and underline the potential of LC and absorbance detection for analysis of dissolved lignin with our proposed method.
author2 Danmarks Frie Forskningsfond
National Science Foundation
format Article in Journal/Newspaper
author Bruhn, Anders Dalhoff
Wünsch, Urban
Osburn, Christopher L.
Rudolph, Jacob C.
Stedmon, Colin A.
spellingShingle Bruhn, Anders Dalhoff
Wünsch, Urban
Osburn, Christopher L.
Rudolph, Jacob C.
Stedmon, Colin A.
Lignin phenol quantification from machine learning‐assisted decomposition of liquid chromatography‐absorbance spectroscopy data
author_facet Bruhn, Anders Dalhoff
Wünsch, Urban
Osburn, Christopher L.
Rudolph, Jacob C.
Stedmon, Colin A.
author_sort Bruhn, Anders Dalhoff
title Lignin phenol quantification from machine learning‐assisted decomposition of liquid chromatography‐absorbance spectroscopy data
title_short Lignin phenol quantification from machine learning‐assisted decomposition of liquid chromatography‐absorbance spectroscopy data
title_full Lignin phenol quantification from machine learning‐assisted decomposition of liquid chromatography‐absorbance spectroscopy data
title_fullStr Lignin phenol quantification from machine learning‐assisted decomposition of liquid chromatography‐absorbance spectroscopy data
title_full_unstemmed Lignin phenol quantification from machine learning‐assisted decomposition of liquid chromatography‐absorbance spectroscopy data
title_sort lignin phenol quantification from machine learning‐assisted decomposition of liquid chromatography‐absorbance spectroscopy data
publisher Wiley
publishDate 2023
url http://dx.doi.org/10.1002/lom3.10561
https://aslopubs.onlinelibrary.wiley.com/doi/pdf/10.1002/lom3.10561
genre Davis Strait
genre_facet Davis Strait
op_source Limnology and Oceanography: Methods
volume 21, issue 8, page 508-528
ISSN 1541-5856 1541-5856
op_rights http://creativecommons.org/licenses/by/4.0/
http://creativecommons.org/licenses/by/4.0/
op_doi https://doi.org/10.1002/lom3.10561
container_title Limnology and Oceanography: Methods
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