A simple adjustment to test reliability of bacterivory rates derived from the dilution method

Abstract Quantification of grazing losses of marine heterotrophic bacteria is critical for understanding nutrient and carbon pathways in aquatic systems. The dilution method is a commonly used experimental approach for quantifying bacterivory. However, valid estimates of grazing rates obtained using...

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Published in:Limnology and Oceanography: Methods
Main Authors: Pree, Bernadette, Kuhlisch, Constanze, Pohnert, Georg, Sazhin, Andrey F., Jakobsen, Hans Henrik, Lund Paulsen, Maria, Frischer, Marc E., Stoecker, Diane, Nejstgaard, Jens C., Larsen, Aud
Format: Article in Journal/Newspaper
Language:English
Published: Wiley 2015
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Online Access:http://dx.doi.org/10.1002/lom3.10076
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spelling crwiley:10.1002/lom3.10076 2024-09-15T18:30:33+00:00 A simple adjustment to test reliability of bacterivory rates derived from the dilution method Pree, Bernadette Kuhlisch, Constanze Pohnert, Georg Sazhin, Andrey F. Jakobsen, Hans Henrik Lund Paulsen, Maria Frischer, Marc E. Stoecker, Diane Nejstgaard, Jens C. Larsen, Aud 2015 http://dx.doi.org/10.1002/lom3.10076 https://api.wiley.com/onlinelibrary/tdm/v1/articles/10.1002%2Flom3.10076 https://onlinelibrary.wiley.com/doi/pdf/10.1002/lom3.10076 https://onlinelibrary.wiley.com/doi/full-xml/10.1002/lom3.10076 https://aslopubs.onlinelibrary.wiley.com/doi/pdf/10.1002/lom3.10076 en eng Wiley http://creativecommons.org/licenses/by-nc-nd/4.0/ Limnology and Oceanography: Methods volume 14, issue 2, page 114-123 ISSN 1541-5856 1541-5856 journal-article 2015 crwiley https://doi.org/10.1002/lom3.10076 2024-06-27T04:22:02Z Abstract Quantification of grazing losses of marine heterotrophic bacteria is critical for understanding nutrient and carbon pathways in aquatic systems. The dilution method is a commonly used experimental approach for quantifying bacterivory. However, valid estimates of grazing rates obtained using this method depend on several methodological assumptions including that the method does not influence specific growth rates of bacteria. Here, we hypothesize that filtration during the set‐up of a dilution experiment has the potential to release allelochemicals from phytoplankton cells and thereby stimulate or inhibit bacterial growth with the consequence of biased grazing estimates. We tested this hypothesis during a natural Phaeocystis pouchetii bloom at two different locations within an Arctic fjord. Results from the dilution experiments suggest higher gross growth rate and grazing impact for bacteria in the outer fjord compared with the inner fjord. However, specific growth rates estimated by bacterial production cell −1 were significantly elevated in dilutions of water from the outer fjord but not the inner fjord. The analysis of dissolved metabolites in the seawater from both experiments prior and after filtration revealed altered metabolic profiles after filtration at both stations. As unaffected specific growth of prey on dilution is one of three fundamental assumptions of the dilution method, we conclude that it is important that empirically estimated bacterial specific growth rates be routinely included when using the dilution method to quantify bacterivory. Article in Journal/Newspaper Phytoplankton Wiley Online Library Limnology and Oceanography: Methods 14 2 114 123
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collection Wiley Online Library
op_collection_id crwiley
language English
description Abstract Quantification of grazing losses of marine heterotrophic bacteria is critical for understanding nutrient and carbon pathways in aquatic systems. The dilution method is a commonly used experimental approach for quantifying bacterivory. However, valid estimates of grazing rates obtained using this method depend on several methodological assumptions including that the method does not influence specific growth rates of bacteria. Here, we hypothesize that filtration during the set‐up of a dilution experiment has the potential to release allelochemicals from phytoplankton cells and thereby stimulate or inhibit bacterial growth with the consequence of biased grazing estimates. We tested this hypothesis during a natural Phaeocystis pouchetii bloom at two different locations within an Arctic fjord. Results from the dilution experiments suggest higher gross growth rate and grazing impact for bacteria in the outer fjord compared with the inner fjord. However, specific growth rates estimated by bacterial production cell −1 were significantly elevated in dilutions of water from the outer fjord but not the inner fjord. The analysis of dissolved metabolites in the seawater from both experiments prior and after filtration revealed altered metabolic profiles after filtration at both stations. As unaffected specific growth of prey on dilution is one of three fundamental assumptions of the dilution method, we conclude that it is important that empirically estimated bacterial specific growth rates be routinely included when using the dilution method to quantify bacterivory.
format Article in Journal/Newspaper
author Pree, Bernadette
Kuhlisch, Constanze
Pohnert, Georg
Sazhin, Andrey F.
Jakobsen, Hans Henrik
Lund Paulsen, Maria
Frischer, Marc E.
Stoecker, Diane
Nejstgaard, Jens C.
Larsen, Aud
spellingShingle Pree, Bernadette
Kuhlisch, Constanze
Pohnert, Georg
Sazhin, Andrey F.
Jakobsen, Hans Henrik
Lund Paulsen, Maria
Frischer, Marc E.
Stoecker, Diane
Nejstgaard, Jens C.
Larsen, Aud
A simple adjustment to test reliability of bacterivory rates derived from the dilution method
author_facet Pree, Bernadette
Kuhlisch, Constanze
Pohnert, Georg
Sazhin, Andrey F.
Jakobsen, Hans Henrik
Lund Paulsen, Maria
Frischer, Marc E.
Stoecker, Diane
Nejstgaard, Jens C.
Larsen, Aud
author_sort Pree, Bernadette
title A simple adjustment to test reliability of bacterivory rates derived from the dilution method
title_short A simple adjustment to test reliability of bacterivory rates derived from the dilution method
title_full A simple adjustment to test reliability of bacterivory rates derived from the dilution method
title_fullStr A simple adjustment to test reliability of bacterivory rates derived from the dilution method
title_full_unstemmed A simple adjustment to test reliability of bacterivory rates derived from the dilution method
title_sort simple adjustment to test reliability of bacterivory rates derived from the dilution method
publisher Wiley
publishDate 2015
url http://dx.doi.org/10.1002/lom3.10076
https://api.wiley.com/onlinelibrary/tdm/v1/articles/10.1002%2Flom3.10076
https://onlinelibrary.wiley.com/doi/pdf/10.1002/lom3.10076
https://onlinelibrary.wiley.com/doi/full-xml/10.1002/lom3.10076
https://aslopubs.onlinelibrary.wiley.com/doi/pdf/10.1002/lom3.10076
genre Phytoplankton
genre_facet Phytoplankton
op_source Limnology and Oceanography: Methods
volume 14, issue 2, page 114-123
ISSN 1541-5856 1541-5856
op_rights http://creativecommons.org/licenses/by-nc-nd/4.0/
op_doi https://doi.org/10.1002/lom3.10076
container_title Limnology and Oceanography: Methods
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