DNA metabarcoding uncovers fungal diversity in soils of protected and non-protected areas on Deception Island, Antarctica
Abstract We assessed soil fungal diversity at two sites on Deception Island, South Shetland Islands, Antarctica using DNA metabarcoding analysis. The first site was a relatively undisturbed area, and the second was much more heavily impacted by research and tourism. We detected 346 fungal amplicon s...
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Online Access: | http://dx.doi.org/10.1038/s41598-020-78934-7 http://www.nature.com/articles/s41598-020-78934-7.pdf http://www.nature.com/articles/s41598-020-78934-7 |
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crspringernat:10.1038/s41598-020-78934-7 2023-05-15T14:11:56+02:00 DNA metabarcoding uncovers fungal diversity in soils of protected and non-protected areas on Deception Island, Antarctica Rosa, Luiz Henrique da Silva, Thamar Holanda Ogaki, Mayara Baptistucci Pinto, Otávio Henrique Bezerra Stech, Michael Convey, Peter Carvalho-Silva, Micheline Rosa, Carlos Augusto Câmara, Paulo E. A. S. Conselho Nacional de Desenvolvimento Científico e Tecnológico National Eye Research Centre 2020 http://dx.doi.org/10.1038/s41598-020-78934-7 http://www.nature.com/articles/s41598-020-78934-7.pdf http://www.nature.com/articles/s41598-020-78934-7 en eng Springer Science and Business Media LLC https://creativecommons.org/licenses/by/4.0 https://creativecommons.org/licenses/by/4.0 CC-BY Scientific Reports volume 10, issue 1 ISSN 2045-2322 Multidisciplinary journal-article 2020 crspringernat https://doi.org/10.1038/s41598-020-78934-7 2022-01-04T07:32:13Z Abstract We assessed soil fungal diversity at two sites on Deception Island, South Shetland Islands, Antarctica using DNA metabarcoding analysis. The first site was a relatively undisturbed area, and the second was much more heavily impacted by research and tourism. We detected 346 fungal amplicon sequence variants dominated by the phyla Ascomycota , Basidiomycota , Mortierellomycota and Chytridiomycota . We also detected taxa belonging to the rare phyla Mucoromycota and Rozellomycota , which have been difficult to detect in Antarctica by traditional isolation methods. Cladosporium sp., Pseudogymnoascus roseus , Leotiomycetes sp. 2, Penicillium sp., Mortierella sp. 1, Mortierella sp. 2, Pseudogymnoascus appendiculatus and Pseudogymnoascus sp. were the most dominant fungi. In addition, 440,153 of the total of 1,214,875 reads detected could be classified only at the level of Fungi. In both sampling areas the DNA of opportunistic, phytopathogenic and symbiotic fungi were detected, which might have been introduced by human activities, transported by birds or wind, and/or represent resident fungi not previously reported from Antarctica. Further long-term studies are required to elucidate how biological colonization in the island may be affected by climatic changes and/or other anthropogenic influences. Article in Journal/Newspaper Antarc* Antarctica Deception Island South Shetland Islands Springer Nature (via Crossref) Deception Island ENVELOPE(-60.633,-60.633,-62.950,-62.950) South Shetland Islands Scientific Reports 10 1 |
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Open Polar |
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Springer Nature (via Crossref) |
op_collection_id |
crspringernat |
language |
English |
topic |
Multidisciplinary |
spellingShingle |
Multidisciplinary Rosa, Luiz Henrique da Silva, Thamar Holanda Ogaki, Mayara Baptistucci Pinto, Otávio Henrique Bezerra Stech, Michael Convey, Peter Carvalho-Silva, Micheline Rosa, Carlos Augusto Câmara, Paulo E. A. S. DNA metabarcoding uncovers fungal diversity in soils of protected and non-protected areas on Deception Island, Antarctica |
topic_facet |
Multidisciplinary |
description |
Abstract We assessed soil fungal diversity at two sites on Deception Island, South Shetland Islands, Antarctica using DNA metabarcoding analysis. The first site was a relatively undisturbed area, and the second was much more heavily impacted by research and tourism. We detected 346 fungal amplicon sequence variants dominated by the phyla Ascomycota , Basidiomycota , Mortierellomycota and Chytridiomycota . We also detected taxa belonging to the rare phyla Mucoromycota and Rozellomycota , which have been difficult to detect in Antarctica by traditional isolation methods. Cladosporium sp., Pseudogymnoascus roseus , Leotiomycetes sp. 2, Penicillium sp., Mortierella sp. 1, Mortierella sp. 2, Pseudogymnoascus appendiculatus and Pseudogymnoascus sp. were the most dominant fungi. In addition, 440,153 of the total of 1,214,875 reads detected could be classified only at the level of Fungi. In both sampling areas the DNA of opportunistic, phytopathogenic and symbiotic fungi were detected, which might have been introduced by human activities, transported by birds or wind, and/or represent resident fungi not previously reported from Antarctica. Further long-term studies are required to elucidate how biological colonization in the island may be affected by climatic changes and/or other anthropogenic influences. |
author2 |
Conselho Nacional de Desenvolvimento Científico e Tecnológico National Eye Research Centre |
format |
Article in Journal/Newspaper |
author |
Rosa, Luiz Henrique da Silva, Thamar Holanda Ogaki, Mayara Baptistucci Pinto, Otávio Henrique Bezerra Stech, Michael Convey, Peter Carvalho-Silva, Micheline Rosa, Carlos Augusto Câmara, Paulo E. A. S. |
author_facet |
Rosa, Luiz Henrique da Silva, Thamar Holanda Ogaki, Mayara Baptistucci Pinto, Otávio Henrique Bezerra Stech, Michael Convey, Peter Carvalho-Silva, Micheline Rosa, Carlos Augusto Câmara, Paulo E. A. S. |
author_sort |
Rosa, Luiz Henrique |
title |
DNA metabarcoding uncovers fungal diversity in soils of protected and non-protected areas on Deception Island, Antarctica |
title_short |
DNA metabarcoding uncovers fungal diversity in soils of protected and non-protected areas on Deception Island, Antarctica |
title_full |
DNA metabarcoding uncovers fungal diversity in soils of protected and non-protected areas on Deception Island, Antarctica |
title_fullStr |
DNA metabarcoding uncovers fungal diversity in soils of protected and non-protected areas on Deception Island, Antarctica |
title_full_unstemmed |
DNA metabarcoding uncovers fungal diversity in soils of protected and non-protected areas on Deception Island, Antarctica |
title_sort |
dna metabarcoding uncovers fungal diversity in soils of protected and non-protected areas on deception island, antarctica |
publisher |
Springer Science and Business Media LLC |
publishDate |
2020 |
url |
http://dx.doi.org/10.1038/s41598-020-78934-7 http://www.nature.com/articles/s41598-020-78934-7.pdf http://www.nature.com/articles/s41598-020-78934-7 |
long_lat |
ENVELOPE(-60.633,-60.633,-62.950,-62.950) |
geographic |
Deception Island South Shetland Islands |
geographic_facet |
Deception Island South Shetland Islands |
genre |
Antarc* Antarctica Deception Island South Shetland Islands |
genre_facet |
Antarc* Antarctica Deception Island South Shetland Islands |
op_source |
Scientific Reports volume 10, issue 1 ISSN 2045-2322 |
op_rights |
https://creativecommons.org/licenses/by/4.0 https://creativecommons.org/licenses/by/4.0 |
op_rightsnorm |
CC-BY |
op_doi |
https://doi.org/10.1038/s41598-020-78934-7 |
container_title |
Scientific Reports |
container_volume |
10 |
container_issue |
1 |
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1766284169979101184 |