DNA metabarcoding uncovers fungal diversity in soils of protected and non-protected areas on Deception Island, Antarctica

Abstract We assessed soil fungal diversity at two sites on Deception Island, South Shetland Islands, Antarctica using DNA metabarcoding analysis. The first site was a relatively undisturbed area, and the second was much more heavily impacted by research and tourism. We detected 346 fungal amplicon s...

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Published in:Scientific Reports
Main Authors: Rosa, Luiz Henrique, da Silva, Thamar Holanda, Ogaki, Mayara Baptistucci, Pinto, Otávio Henrique Bezerra, Stech, Michael, Convey, Peter, Carvalho-Silva, Micheline, Rosa, Carlos Augusto, Câmara, Paulo E. A. S.
Other Authors: Conselho Nacional de Desenvolvimento Científico e Tecnológico, National Eye Research Centre
Format: Article in Journal/Newspaper
Language:English
Published: Springer Science and Business Media LLC 2020
Subjects:
Online Access:http://dx.doi.org/10.1038/s41598-020-78934-7
http://www.nature.com/articles/s41598-020-78934-7.pdf
http://www.nature.com/articles/s41598-020-78934-7
id crspringernat:10.1038/s41598-020-78934-7
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spelling crspringernat:10.1038/s41598-020-78934-7 2023-05-15T14:11:56+02:00 DNA metabarcoding uncovers fungal diversity in soils of protected and non-protected areas on Deception Island, Antarctica Rosa, Luiz Henrique da Silva, Thamar Holanda Ogaki, Mayara Baptistucci Pinto, Otávio Henrique Bezerra Stech, Michael Convey, Peter Carvalho-Silva, Micheline Rosa, Carlos Augusto Câmara, Paulo E. A. S. Conselho Nacional de Desenvolvimento Científico e Tecnológico National Eye Research Centre 2020 http://dx.doi.org/10.1038/s41598-020-78934-7 http://www.nature.com/articles/s41598-020-78934-7.pdf http://www.nature.com/articles/s41598-020-78934-7 en eng Springer Science and Business Media LLC https://creativecommons.org/licenses/by/4.0 https://creativecommons.org/licenses/by/4.0 CC-BY Scientific Reports volume 10, issue 1 ISSN 2045-2322 Multidisciplinary journal-article 2020 crspringernat https://doi.org/10.1038/s41598-020-78934-7 2022-01-04T07:32:13Z Abstract We assessed soil fungal diversity at two sites on Deception Island, South Shetland Islands, Antarctica using DNA metabarcoding analysis. The first site was a relatively undisturbed area, and the second was much more heavily impacted by research and tourism. We detected 346 fungal amplicon sequence variants dominated by the phyla Ascomycota , Basidiomycota , Mortierellomycota and Chytridiomycota . We also detected taxa belonging to the rare phyla Mucoromycota and Rozellomycota , which have been difficult to detect in Antarctica by traditional isolation methods. Cladosporium sp., Pseudogymnoascus roseus , Leotiomycetes sp. 2, Penicillium sp., Mortierella sp. 1, Mortierella sp. 2, Pseudogymnoascus appendiculatus and Pseudogymnoascus sp. were the most dominant fungi. In addition, 440,153 of the total of 1,214,875 reads detected could be classified only at the level of Fungi. In both sampling areas the DNA of opportunistic, phytopathogenic and symbiotic fungi were detected, which might have been introduced by human activities, transported by birds or wind, and/or represent resident fungi not previously reported from Antarctica. Further long-term studies are required to elucidate how biological colonization in the island may be affected by climatic changes and/or other anthropogenic influences. Article in Journal/Newspaper Antarc* Antarctica Deception Island South Shetland Islands Springer Nature (via Crossref) Deception Island ENVELOPE(-60.633,-60.633,-62.950,-62.950) South Shetland Islands Scientific Reports 10 1
institution Open Polar
collection Springer Nature (via Crossref)
op_collection_id crspringernat
language English
topic Multidisciplinary
spellingShingle Multidisciplinary
Rosa, Luiz Henrique
da Silva, Thamar Holanda
Ogaki, Mayara Baptistucci
Pinto, Otávio Henrique Bezerra
Stech, Michael
Convey, Peter
Carvalho-Silva, Micheline
Rosa, Carlos Augusto
Câmara, Paulo E. A. S.
DNA metabarcoding uncovers fungal diversity in soils of protected and non-protected areas on Deception Island, Antarctica
topic_facet Multidisciplinary
description Abstract We assessed soil fungal diversity at two sites on Deception Island, South Shetland Islands, Antarctica using DNA metabarcoding analysis. The first site was a relatively undisturbed area, and the second was much more heavily impacted by research and tourism. We detected 346 fungal amplicon sequence variants dominated by the phyla Ascomycota , Basidiomycota , Mortierellomycota and Chytridiomycota . We also detected taxa belonging to the rare phyla Mucoromycota and Rozellomycota , which have been difficult to detect in Antarctica by traditional isolation methods. Cladosporium sp., Pseudogymnoascus roseus , Leotiomycetes sp. 2, Penicillium sp., Mortierella sp. 1, Mortierella sp. 2, Pseudogymnoascus appendiculatus and Pseudogymnoascus sp. were the most dominant fungi. In addition, 440,153 of the total of 1,214,875 reads detected could be classified only at the level of Fungi. In both sampling areas the DNA of opportunistic, phytopathogenic and symbiotic fungi were detected, which might have been introduced by human activities, transported by birds or wind, and/or represent resident fungi not previously reported from Antarctica. Further long-term studies are required to elucidate how biological colonization in the island may be affected by climatic changes and/or other anthropogenic influences.
author2 Conselho Nacional de Desenvolvimento Científico e Tecnológico
National Eye Research Centre
format Article in Journal/Newspaper
author Rosa, Luiz Henrique
da Silva, Thamar Holanda
Ogaki, Mayara Baptistucci
Pinto, Otávio Henrique Bezerra
Stech, Michael
Convey, Peter
Carvalho-Silva, Micheline
Rosa, Carlos Augusto
Câmara, Paulo E. A. S.
author_facet Rosa, Luiz Henrique
da Silva, Thamar Holanda
Ogaki, Mayara Baptistucci
Pinto, Otávio Henrique Bezerra
Stech, Michael
Convey, Peter
Carvalho-Silva, Micheline
Rosa, Carlos Augusto
Câmara, Paulo E. A. S.
author_sort Rosa, Luiz Henrique
title DNA metabarcoding uncovers fungal diversity in soils of protected and non-protected areas on Deception Island, Antarctica
title_short DNA metabarcoding uncovers fungal diversity in soils of protected and non-protected areas on Deception Island, Antarctica
title_full DNA metabarcoding uncovers fungal diversity in soils of protected and non-protected areas on Deception Island, Antarctica
title_fullStr DNA metabarcoding uncovers fungal diversity in soils of protected and non-protected areas on Deception Island, Antarctica
title_full_unstemmed DNA metabarcoding uncovers fungal diversity in soils of protected and non-protected areas on Deception Island, Antarctica
title_sort dna metabarcoding uncovers fungal diversity in soils of protected and non-protected areas on deception island, antarctica
publisher Springer Science and Business Media LLC
publishDate 2020
url http://dx.doi.org/10.1038/s41598-020-78934-7
http://www.nature.com/articles/s41598-020-78934-7.pdf
http://www.nature.com/articles/s41598-020-78934-7
long_lat ENVELOPE(-60.633,-60.633,-62.950,-62.950)
geographic Deception Island
South Shetland Islands
geographic_facet Deception Island
South Shetland Islands
genre Antarc*
Antarctica
Deception Island
South Shetland Islands
genre_facet Antarc*
Antarctica
Deception Island
South Shetland Islands
op_source Scientific Reports
volume 10, issue 1
ISSN 2045-2322
op_rights https://creativecommons.org/licenses/by/4.0
https://creativecommons.org/licenses/by/4.0
op_rightsnorm CC-BY
op_doi https://doi.org/10.1038/s41598-020-78934-7
container_title Scientific Reports
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